BLASTX nr result

ID: Coptis24_contig00008008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00008008
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]    72   7e-11
ref|XP_003618978.1| Galactose-1-phosphate uridylyltransferase [M...    64   1e-08
ref|XP_003533467.1| PREDICTED: uncharacterized protein LOC100782...    60   2e-07
ref|XP_003518690.1| PREDICTED: uncharacterized protein LOC100805...    59   4e-07

>emb|CAN70078.1| hypothetical protein VITISV_001036 [Vitis vinifera]
          Length = 773

 Score = 71.6 bits (174), Expect = 7e-11
 Identities = 44/129 (34%), Positives = 62/129 (48%), Gaps = 1/129 (0%)
 Frame = -2

Query: 385 LDFTDAFTTDVVFNCRDELVTWARDVGRSVGMVVIIKKSEFGASGRS-SRIFLACERFGK 209
           +D+T+ FTTD +   R+ L+ W R+ G+  GMV+II++++ GA+ RS  RI   CER G 
Sbjct: 1   MDYTNVFTTDAIHPSREALIEWVRETGKRNGMVIIIQRADIGATNRSRPRITFVCERSGA 60

Query: 208 RXXXXXXXXXXXXXXXXXXXXXXXXCERFGKRREYKVPFKKKTSATRRRVSKRCDCPFLL 29
                                         K  E K   K+K + T     K+C CPF L
Sbjct: 61  YRHTG-----------------------XDKGEEGKKKRKRKATGT-----KKCGCPFSL 92

Query: 28  RGIKMPKDD 2
           RGIK+P  D
Sbjct: 93  RGIKLPLAD 101


>ref|XP_003618978.1| Galactose-1-phosphate uridylyltransferase [Medicago truncatula]
           gi|355493993|gb|AES75196.1| Galactose-1-phosphate
           uridylyltransferase [Medicago truncatula]
          Length = 679

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
 Frame = -2

Query: 385 LDFTDAFTTDVVFNCRDELVTWARDVGRSVGMVVIIKKSEFGA----SGRSSRIFLACER 218
           +D++DAFTT  VF  R+ L+ WAR +GR  G  VII++S+ G      GR + + L C  
Sbjct: 498 VDYSDAFTTKEVFPTREYLLNWARAIGREHGFTVIIQRSDNGGLKKRIGRKTTVILGC-- 555

Query: 217 FGKRXXXXXXXXXXXXXXXXXXXXXXXXCERFGKRREYKVPFKKKTSATRRRVSKRCDCP 38
                                        ER GK R+YK    +KT       +K+C CP
Sbjct: 556 -----------------------------ERSGKYRQYKDALARKTG------TKKCGCP 580

Query: 37  FLLRG 23
           F LRG
Sbjct: 581 FRLRG 585


>ref|XP_003533467.1| PREDICTED: uncharacterized protein LOC100782358 [Glycine max]
          Length = 1403

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 46/169 (27%), Positives = 66/169 (39%)
 Frame = -2

Query: 508  RDDVQSATDLEFHLTDLPLQDENMPVTSEPISDIESQSLRKLDFTDAFTTDVVFNCRDEL 329
            R  ++  +D+E H++  P          E  S     +    D +DAF T  +F  RD +
Sbjct: 764  RIPIEQQSDIEDHVSQTP----------EEASTPTDGATNIADCSDAFKTTELFPSRDAV 813

Query: 328  VTWARDVGRSVGMVVIIKKSEFGASGRSSRIFLACERFGKRXXXXXXXXXXXXXXXXXXX 149
            + WAR+V +  G V+ I +SE         I                             
Sbjct: 814  LNWAREVAKENGFVLTILRSETHTGSNKKNI-------------------------RGKT 848

Query: 148  XXXXXCERFGKRREYKVPFKKKTSATRRRVSKRCDCPFLLRGIKMPKDD 2
                 CER GK R YK    K TS      SK+C+CPF L+G  + KD+
Sbjct: 849  YVILGCERSGKYRPYKNTLSKVTS------SKKCECPFKLKGKALNKDE 891


>ref|XP_003518690.1| PREDICTED: uncharacterized protein LOC100805365 [Glycine max]
          Length = 878

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
 Frame = -2

Query: 454 LQDENMPVTSEPISDIESQSLRKLDFTDAFTTDVVFNCRDELVTWARDVGRSVGMVVIIK 275
           ++D    ++ E    I+    + +D +DAF T  VF  R+ ++ WARDV +  G V+II 
Sbjct: 1   MEDHVSEMSKEVTIPIDGAIDKSVDCSDAFNTTEVFPSREAMLNWARDVAKENGFVLIIL 60

Query: 274 KSEFGASGRSSRIFLACERFGKRXXXXXXXXXXXXXXXXXXXXXXXXCERFGK-RREYKV 98
           +SE   S RS++ +    R  +R                        C+R GK R  YK 
Sbjct: 61  RSE--TSTRSTK-YTRSTRCNQR-----------------KTFVIMGCDRSGKYRGPYKN 100

Query: 97  PFKKKTSATRRRVSKRCDCPFLLRGIKMPK 8
              +K S TR     +C+CPF L+G  + K
Sbjct: 101 ALSRKVSGTR-----KCECPFKLKGKALKK 125


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