BLASTX nr result

ID: Coptis24_contig00007930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007930
         (1169 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282581.2| PREDICTED: protein unc-50 homolog [Vitis vin...   161   3e-37
emb|CBI40262.3| unnamed protein product [Vitis vinifera]              161   3e-37
ref|XP_002298750.1| predicted protein [Populus trichocarpa] gi|2...   158   2e-36
gb|AFK46272.1| unknown [Medicago truncatula]                          157   4e-36
ref|XP_003576743.1| PREDICTED: protein unc-50 homolog isoform 2 ...   157   4e-36

>ref|XP_002282581.2| PREDICTED: protein unc-50 homolog [Vitis vinifera]
          Length = 251

 Score =  161 bits (408), Expect = 3e-37
 Identities = 78/102 (76%), Positives = 83/102 (81%)
 Frame = -2

Query: 553 LYAFDVHCNSFFPMFVALYVIHYFLSPLLVAHGFIPVLLSNLLFMAAISYYHYLNFLGYD 374
           LYAFDVHCNSFFPMFV LYVIHYFLSPLLVAHGFIPVLLSNLLFM A SYYHYLNFLGYD
Sbjct: 147 LYAFDVHCNSFFPMFVLLYVIHYFLSPLLVAHGFIPVLLSNLLFMVATSYYHYLNFLGYD 206

Query: 373 VLPFLEKTTFFLYXXXXXXXXXXXXXXXXFNPTRYMMSIYFS 248
           VLPFLE+TTFFLY                FNP+RY+M++YFS
Sbjct: 207 VLPFLERTTFFLYPIGCVIILSPIFILSGFNPSRYIMNMYFS 248


>emb|CBI40262.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  161 bits (408), Expect = 3e-37
 Identities = 78/102 (76%), Positives = 83/102 (81%)
 Frame = -2

Query: 553 LYAFDVHCNSFFPMFVALYVIHYFLSPLLVAHGFIPVLLSNLLFMAAISYYHYLNFLGYD 374
           LYAFDVHCNSFFPMFV LYVIHYFLSPLLVAHGFIPVLLSNLLFM A SYYHYLNFLGYD
Sbjct: 154 LYAFDVHCNSFFPMFVLLYVIHYFLSPLLVAHGFIPVLLSNLLFMVATSYYHYLNFLGYD 213

Query: 373 VLPFLEKTTFFLYXXXXXXXXXXXXXXXXFNPTRYMMSIYFS 248
           VLPFLE+TTFFLY                FNP+RY+M++YFS
Sbjct: 214 VLPFLERTTFFLYPIGCVIILSPIFILSGFNPSRYIMNMYFS 255


>ref|XP_002298750.1| predicted protein [Populus trichocarpa] gi|222846008|gb|EEE83555.1|
           predicted protein [Populus trichocarpa]
          Length = 256

 Score =  158 bits (400), Expect = 2e-36
 Identities = 76/102 (74%), Positives = 82/102 (80%)
 Frame = -2

Query: 553 LYAFDVHCNSFFPMFVALYVIHYFLSPLLVAHGFIPVLLSNLLFMAAISYYHYLNFLGYD 374
           LYAFDVHCNSFFPMFV LYVIHYFLSP+LVAHGFIPVLLSNLLFM A SYYHYLNFLGY 
Sbjct: 152 LYAFDVHCNSFFPMFVMLYVIHYFLSPILVAHGFIPVLLSNLLFMVAASYYHYLNFLGYY 211

Query: 373 VLPFLEKTTFFLYXXXXXXXXXXXXXXXXFNPTRYMMSIYFS 248
           VLPFLE+TTFFLY                FNP+RY+M++YFS
Sbjct: 212 VLPFLERTTFFLYPIGLVIVLSPILILSGFNPSRYLMNVYFS 253


>gb|AFK46272.1| unknown [Medicago truncatula]
          Length = 257

 Score =  157 bits (398), Expect = 4e-36
 Identities = 76/102 (74%), Positives = 80/102 (78%)
 Frame = -2

Query: 553 LYAFDVHCNSFFPMFVALYVIHYFLSPLLVAHGFIPVLLSNLLFMAAISYYHYLNFLGYD 374
           +YAFDVHCNSFFPMFV LYVIHYFLSPLLVAHGFIP LLSNLLFM   SYYHYLNFLGYD
Sbjct: 153 MYAFDVHCNSFFPMFVLLYVIHYFLSPLLVAHGFIPELLSNLLFMVGASYYHYLNFLGYD 212

Query: 373 VLPFLEKTTFFLYXXXXXXXXXXXXXXXXFNPTRYMMSIYFS 248
           VLPFLE+TTFFLY                FNP+RY M+IYFS
Sbjct: 213 VLPFLERTTFFLYPIGVVIVLSPILILSGFNPSRYFMNIYFS 254


>ref|XP_003576743.1| PREDICTED: protein unc-50 homolog isoform 2 [Brachypodium
           distachyon]
          Length = 254

 Score =  157 bits (398), Expect = 4e-36
 Identities = 75/105 (71%), Positives = 81/105 (77%)
 Frame = -2

Query: 562 PRRLYAFDVHCNSFFPMFVALYVIHYFLSPLLVAHGFIPVLLSNLLFMAAISYYHYLNFL 383
           P RLYAFDVHCNSFFP FV LYV+ YFLSPLL+AHGF P LLSNLLFM AISYYHYLNFL
Sbjct: 150 PCRLYAFDVHCNSFFPAFVILYVLQYFLSPLLIAHGFFPALLSNLLFMVAISYYHYLNFL 209

Query: 382 GYDVLPFLEKTTFFLYXXXXXXXXXXXXXXXXFNPTRYMMSIYFS 248
           GYDVLPFL++TTFFLY                FNPTRY +S+YFS
Sbjct: 210 GYDVLPFLDRTTFFLYPIGLVIILSPLMILIGFNPTRYFLSLYFS 254


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