BLASTX nr result
ID: Coptis24_contig00007893
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00007893
(1972 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat... 633 e-179
emb|CBI28440.3| unnamed protein product [Vitis vinifera] 633 e-179
emb|CAN79288.1| hypothetical protein VITISV_044035 [Vitis vinifera] 631 e-178
ref|XP_002321197.1| predicted protein [Populus trichocarpa] gi|2... 607 e-171
ref|XP_002525089.1| conserved hypothetical protein [Ricinus comm... 600 e-169
>ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 633 bits (1632), Expect = e-179
Identities = 307/552 (55%), Positives = 410/552 (74%), Gaps = 17/552 (3%)
Frame = -3
Query: 1970 RMYILKKLVGGDVRWIVRQFHNDHNHELLEDEEVRYLPAYRKIPDSDRERILSMYKTGCS 1791
++Y+ K++V G +W V QF N HNHELLED++VR LPAYRKI ++D+ERIL + K G
Sbjct: 1178 KLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFP 1237
Query: 1790 VRHIMKVLQLDKGGNPGNLPFIDRDVRNFLQSCKKI----------DRGNDVSELLDICK 1641
V I++VL+ +KG PG LPFI++DVRNF+++CKK R ND ELL+ CK
Sbjct: 1238 VNRIVRVLETEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEKRENDTLELLETCK 1297
Query: 1640 TVRETDPEFLFDYTMDENAKLENITWSYGNSVRAYKLFGDVVVFDATYREISYDRLLGVW 1461
+ E DP+F++D+TMD N K+ENI WSYGNSV AY +FGDVV FD TYR I+Y LLGVW
Sbjct: 1298 ALSERDPDFVYDFTMDPNDKVENIAWSYGNSVHAYSVFGDVVAFDTTYRSITYGLLLGVW 1357
Query: 1460 FGIDNNGKPIFFGCVLLREETAQSYAWALQAFLQFMQRRYPQTILTDLDLVLKDAISNSM 1281
FGIDN+GK IFFGCVLL++ET+QS+AWALQ F++FM+ R PQTILTD+D L+DAI++ +
Sbjct: 1358 FGIDNHGKAIFFGCVLLQDETSQSFAWALQTFVRFMRGRRPQTILTDIDSGLRDAITSEL 1417
Query: 1280 PYTKHVTCIWHIVSKLWSWFSFPLGTRFEEFKSEFERLYNLDTKKDFECQWNQMVTRFAF 1101
P TKHV C+WHI+SKL SWFS PLG ++ +FKS+F+ L L++ +DFE QW+ +V +F
Sbjct: 1418 PNTKHVICLWHILSKLSSWFSLPLGPQYMDFKSQFDILCRLESIEDFEHQWHHLVAQFGL 1477
Query: 1100 GSNKHISLLFSHRTLWAVSYIRGSFLANMTSTEYFQSMDAFLKRILRSQTNLESFFQQVG 921
S+KHI LLFS+R W S IRG FLA M ++EY +S+D F KRIL +QT L++FF+QVG
Sbjct: 1478 VSDKHIGLLFSYRASWPFSCIRGYFLARMMTSEYSKSLDMFFKRILSAQTCLQAFFEQVG 1537
Query: 920 IVANYKNQSRDEVVEEVHIKTSMPIEEHASSILTPYAFSLLQREIVLSMQCAAIETANGS 741
+ A++ NQ+R E ++ +HIKT MPIEEHA SILTPYAF++LQ EIVLSMQ A E ANGS
Sbjct: 1538 VAASWANQTR-ENMQYMHIKTCMPIEEHAQSILTPYAFNVLQHEIVLSMQYATREMANGS 1596
Query: 740 YVVRHHKKLDGGCLVSWIPKDEKICCSCRENEVSGILCRHALRVLALKNYFHLPEKYLPI 561
Y+VRH+K +DGGCLV W+P++E+I CSC+E E SG+LCRH+LR+L +KNYF LP+KY P+
Sbjct: 1597 YLVRHYKTVDGGCLVIWMPEEEQIHCSCKEFEHSGLLCRHSLRLLVVKNYFQLPDKYFPL 1656
Query: 560 RWRRECLSI-------QTNSNDWXXXXXXXXXXXFAESSLTKERIDYVHRELIRIVNNVK 402
RWR+E I Q+NS++ ES ++KER +YVH+EL ++++V+
Sbjct: 1657 RWRKESSLITMDDHNTQSNSDECSQAFHSLAATLLTESLVSKERFNYVHKELTGLLDHVR 1716
Query: 401 TMSPSDGVIFNL 366
M D V N+
Sbjct: 1717 NMPVVDEVSLNM 1728
>emb|CBI28440.3| unnamed protein product [Vitis vinifera]
Length = 1355
Score = 633 bits (1632), Expect = e-179
Identities = 307/552 (55%), Positives = 410/552 (74%), Gaps = 17/552 (3%)
Frame = -3
Query: 1970 RMYILKKLVGGDVRWIVRQFHNDHNHELLEDEEVRYLPAYRKIPDSDRERILSMYKTGCS 1791
++Y+ K++V G +W V QF N HNHELLED++VR LPAYRKI ++D+ERIL + K G
Sbjct: 134 KLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFP 193
Query: 1790 VRHIMKVLQLDKGGNPGNLPFIDRDVRNFLQSCKKI----------DRGNDVSELLDICK 1641
V I++VL+ +KG PG LPFI++DVRNF+++CKK R ND ELL+ CK
Sbjct: 194 VNRIVRVLETEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEKRENDTLELLETCK 253
Query: 1640 TVRETDPEFLFDYTMDENAKLENITWSYGNSVRAYKLFGDVVVFDATYREISYDRLLGVW 1461
+ E DP+F++D+TMD N K+ENI WSYGNSV AY +FGDVV FD TYR I+Y LLGVW
Sbjct: 254 ALSERDPDFVYDFTMDPNDKVENIAWSYGNSVHAYSVFGDVVAFDTTYRSITYGLLLGVW 313
Query: 1460 FGIDNNGKPIFFGCVLLREETAQSYAWALQAFLQFMQRRYPQTILTDLDLVLKDAISNSM 1281
FGIDN+GK IFFGCVLL++ET+QS+AWALQ F++FM+ R PQTILTD+D L+DAI++ +
Sbjct: 314 FGIDNHGKAIFFGCVLLQDETSQSFAWALQTFVRFMRGRRPQTILTDIDSGLRDAITSEL 373
Query: 1280 PYTKHVTCIWHIVSKLWSWFSFPLGTRFEEFKSEFERLYNLDTKKDFECQWNQMVTRFAF 1101
P TKHV C+WHI+SKL SWFS PLG ++ +FKS+F+ L L++ +DFE QW+ +V +F
Sbjct: 374 PNTKHVICLWHILSKLSSWFSLPLGPQYMDFKSQFDILCRLESIEDFEHQWHHLVAQFGL 433
Query: 1100 GSNKHISLLFSHRTLWAVSYIRGSFLANMTSTEYFQSMDAFLKRILRSQTNLESFFQQVG 921
S+KHI LLFS+R W S IRG FLA M ++EY +S+D F KRIL +QT L++FF+QVG
Sbjct: 434 VSDKHIGLLFSYRASWPFSCIRGYFLARMMTSEYSKSLDMFFKRILSAQTCLQAFFEQVG 493
Query: 920 IVANYKNQSRDEVVEEVHIKTSMPIEEHASSILTPYAFSLLQREIVLSMQCAAIETANGS 741
+ A++ NQ+R E ++ +HIKT MPIEEHA SILTPYAF++LQ EIVLSMQ A E ANGS
Sbjct: 494 VAASWANQTR-ENMQYMHIKTCMPIEEHAQSILTPYAFNVLQHEIVLSMQYATREMANGS 552
Query: 740 YVVRHHKKLDGGCLVSWIPKDEKICCSCRENEVSGILCRHALRVLALKNYFHLPEKYLPI 561
Y+VRH+K +DGGCLV W+P++E+I CSC+E E SG+LCRH+LR+L +KNYF LP+KY P+
Sbjct: 553 YLVRHYKTVDGGCLVIWMPEEEQIHCSCKEFEHSGLLCRHSLRLLVVKNYFQLPDKYFPL 612
Query: 560 RWRRECLSI-------QTNSNDWXXXXXXXXXXXFAESSLTKERIDYVHRELIRIVNNVK 402
RWR+E I Q+NS++ ES ++KER +YVH+EL ++++V+
Sbjct: 613 RWRKESSLITMDDHNTQSNSDECSQAFHSLAATLLTESLVSKERFNYVHKELTGLLDHVR 672
Query: 401 TMSPSDGVIFNL 366
M D V N+
Sbjct: 673 NMPVVDEVSLNM 684
>emb|CAN79288.1| hypothetical protein VITISV_044035 [Vitis vinifera]
Length = 692
Score = 631 bits (1627), Expect = e-178
Identities = 306/552 (55%), Positives = 409/552 (74%), Gaps = 17/552 (3%)
Frame = -3
Query: 1970 RMYILKKLVGGDVRWIVRQFHNDHNHELLEDEEVRYLPAYRKIPDSDRERILSMYKTGCS 1791
++Y+ K++V G +W V QF N HNHELLED++VR LPAYRKI ++D+ERIL + K G
Sbjct: 134 KLYLTKEIVDGVTQWYVSQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFP 193
Query: 1790 VRHIMKVLQLDKGGNPGNLPFIDRDVRNFLQSCKKI----------DRGNDVSELLDICK 1641
V I++VL+ +KG PG LPFI++DVRNF+++CKK R ND ELL+ CK
Sbjct: 194 VNRIVRVLETEKGVQPGQLPFIEKDVRNFVRTCKKTVQENDALLTEKRENDTLELLETCK 253
Query: 1640 TVRETDPEFLFDYTMDENAKLENITWSYGNSVRAYKLFGDVVVFDATYREISYDRLLGVW 1461
+ E DP+F++D+TMD N K+ENI WSYGNSV AY +FGDVV FD TYR I+Y LLGVW
Sbjct: 254 ALSERDPDFVYDFTMDPNDKVENIAWSYGNSVHAYSVFGDVVAFDTTYRSITYGLLLGVW 313
Query: 1460 FGIDNNGKPIFFGCVLLREETAQSYAWALQAFLQFMQRRYPQTILTDLDLVLKDAISNSM 1281
FGIDN+GK IFFGCVLL++ET+QS+AWALQ F++FM+ R PQTILTD+D L+DAI++ +
Sbjct: 314 FGIDNHGKAIFFGCVLLQDETSQSFAWALQTFVRFMRGRRPQTILTDIDSGLRDAITSEL 373
Query: 1280 PYTKHVTCIWHIVSKLWSWFSFPLGTRFEEFKSEFERLYNLDTKKDFECQWNQMVTRFAF 1101
P TKHV C+WHI+SKL SWFS PLG ++ +FKS+F+ L L++ +DFE QW+ +V +F
Sbjct: 374 PNTKHVICLWHILSKLSSWFSLPLGPQYMDFKSQFDILCRLESIEDFEHQWHHLVAQFGL 433
Query: 1100 GSNKHISLLFSHRTLWAVSYIRGSFLANMTSTEYFQSMDAFLKRILRSQTNLESFFQQVG 921
S+KHI LLFS+R W S IRG FLA M ++EY +S+D F KRIL +QT L++FF+QVG
Sbjct: 434 VSDKHIGLLFSYRASWPFSCIRGYFLARMMTSEYSKSLDMFFKRILSAQTCLQAFFEQVG 493
Query: 920 IVANYKNQSRDEVVEEVHIKTSMPIEEHASSILTPYAFSLLQREIVLSMQCAAIETANGS 741
+ A++ NQ+R E ++ +H KT MPIEEHA SILTPYAF++LQ EIVLSMQ A E ANGS
Sbjct: 494 VAASWANQTR-ENMQYMHXKTCMPIEEHAQSILTPYAFNVLQHEIVLSMQYATREMANGS 552
Query: 740 YVVRHHKKLDGGCLVSWIPKDEKICCSCRENEVSGILCRHALRVLALKNYFHLPEKYLPI 561
Y+VRH+K +DGGCLV W+P++E+I CSC+E E SG+LCRH+LR+L +KNYF LP+KY P+
Sbjct: 553 YLVRHYKTVDGGCLVIWMPEEEQIHCSCKEFEHSGLLCRHSLRLLVVKNYFQLPDKYFPL 612
Query: 560 RWRRECLSI-------QTNSNDWXXXXXXXXXXXFAESSLTKERIDYVHRELIRIVNNVK 402
RWR+E I Q+NS++ ES ++KER +YVH+EL ++++V+
Sbjct: 613 RWRKESSLITMDDHNTQSNSDECSQAFHSLAATLLTESLVSKERFNYVHKELTGLLDHVR 672
Query: 401 TMSPSDGVIFNL 366
M D V N+
Sbjct: 673 NMPVIDEVSLNM 684
>ref|XP_002321197.1| predicted protein [Populus trichocarpa] gi|222861970|gb|EEE99512.1|
predicted protein [Populus trichocarpa]
Length = 686
Score = 607 bits (1565), Expect = e-171
Identities = 294/557 (52%), Positives = 406/557 (72%), Gaps = 17/557 (3%)
Frame = -3
Query: 1970 RMYILKKLVGGDVRWIVRQFHNDHNHELLEDEEVRYLPAYRKIPDSDRERILSMYKTGCS 1791
++Y+ K++V G +W V QF N HNHELLED++VR LPAYRKI ++D+ERIL + K G
Sbjct: 128 KLYLTKEIVDGLAQWYVSQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFP 187
Query: 1790 VRHIMKVLQLDKGGNPGNLPFIDRDVRNFLQSCKKI----------DRGNDVSELLDICK 1641
+ I+KVL+L+KG PG+ PFI++DVRNF+++CKK R ND ELL+ CK
Sbjct: 188 INRIVKVLELEKGVQPGHFPFIEKDVRNFVRTCKKTVQENDALLTEKRENDTLELLEACK 247
Query: 1640 TVRETDPEFLFDYTMDENAKLENITWSYGNSVRAYKLFGDVVVFDATYREISYDRLLGVW 1461
+V E DP+F +DYT DEN K+ENI W YG+SVRAY L+GDVV FD TYR I+Y LLGVW
Sbjct: 248 SVAERDPDFAYDYTTDENQKVENIAWLYGDSVRAYTLYGDVVTFDTTYRSITYGLLLGVW 307
Query: 1460 FGIDNNGKPIFFGCVLLREETAQSYAWALQAFLQFMQRRYPQTILTDLDLVLKDAISNSM 1281
FG+DN+GK I +GCVLL++E++ S+ WALQ F++F++ R+PQTI+TD++L L+DAI+ +
Sbjct: 308 FGMDNHGKAILYGCVLLQDESSHSFTWALQTFVRFIKGRHPQTIITDMELALRDAIAREL 367
Query: 1280 PYTKHVTCIWHIVSKLWSWFSFPLGTRFEEFKSEFERLYNLDTKKDFECQWNQMVTRFAF 1101
P TKHV CIWHI+SKL SW SFPLG+RFE+FK+EF+ L + + +DFE QWN +V RF
Sbjct: 368 PNTKHVVCIWHILSKLSSWLSFPLGSRFEDFKAEFDLLCHEENVEDFEHQWNLLVARFEL 427
Query: 1100 GSNKHISLLFSHRTLWAVSYIRGSFLANMTSTEYFQSMDAFLKRILRSQTNLESFFQQVG 921
++KH++LLFS+R W++SYIRGSFLA + E+ QS+ FLKRIL QT L++ F+Q+G
Sbjct: 428 VTDKHMALLFSYRGFWSISYIRGSFLARTMAPEFSQSLHTFLKRILGGQTCLQASFEQIG 487
Query: 920 IVANYKNQSRDEVVEEVHIKTSMPIEEHASSILTPYAFSLLQREIVLSMQCAAIETANGS 741
+ A NQ+RD +HIKT +PIEEHA S+LTPYAF++LQ EIVLS+Q A E A+GS
Sbjct: 488 LAATVGNQTRDG-TPYMHIKTCLPIEEHARSVLTPYAFNVLQHEIVLSLQYAIQEMADGS 546
Query: 740 YVVRHHKKLDGGCLVSWIPKDEKICCSCRENEVSGILCRHALRVLALKNYFHLPEKYLPI 561
Y+V+H KK+DG V+W+P+DE+I CSC+E E SGILCRH+LR+L +KNYF LPE+Y P+
Sbjct: 547 YLVQHIKKMDGERFVNWMPEDEQIHCSCKEFEHSGILCRHSLRLLEVKNYFQLPERYFPL 606
Query: 560 RWRRECLSI-------QTNSNDWXXXXXXXXXXXFAESSLTKERIDYVHRELIRIVNNVK 402
RWRR+ + Q+N+++ ES ++KER ++V RE+ ++ V+
Sbjct: 607 RWRRDQSLVPMDDQNAQSNNDECAQAFHALAEALLTESLISKERFNHVQREITGLLAEVR 666
Query: 401 TMSPSDGVIFNLEAIPP 351
+M ++ + N IPP
Sbjct: 667 SMPVAEELSLN---IPP 680
>ref|XP_002525089.1| conserved hypothetical protein [Ricinus communis]
gi|223535670|gb|EEF37336.1| conserved hypothetical
protein [Ricinus communis]
Length = 656
Score = 600 bits (1547), Expect = e-169
Identities = 299/560 (53%), Positives = 398/560 (71%), Gaps = 21/560 (3%)
Frame = -3
Query: 1970 RMYILKKLVGGDVRWIVRQFHNDHNHELLEDEEVRYLPAYRKIPDSDRERILSMYKTGCS 1791
+MY+ K++V G +W V QF N HNHELLED++VR LPAYRKI ++D+ERIL + K G
Sbjct: 96 KMYLSKEVVDGVSQWFVVQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFP 155
Query: 1790 VRHIMKVLQLDKGGNPGNLPFIDRDVRNFLQSCKKI----------DRGNDVSELLDICK 1641
+ I+KVL+L+KG G LPF++RDVRNF+Q+ KKI R ND ELL+ CK
Sbjct: 156 IHRIVKVLELEKGIQGGQLPFLERDVRNFVQNRKKIVQETDALLTEKRENDAMELLEACK 215
Query: 1640 TVRETDPEFLFDYTMDENAKLENITWSYGNSVRAYKLFGDVVVFDATYREISYDRLLGVW 1461
+E D EF+++YT+DE+ K+EN+ WSYG+SV AY LFGDVV FD +YR I+Y L G W
Sbjct: 216 AAKEVDEEFVYEYTVDEHDKVENVAWSYGDSVCAYALFGDVVYFDTSYRSITYGMLFGAW 275
Query: 1460 FGIDNNGKPIFFGCVLLREETAQSYAWALQAFLQFMQRRYPQTILTDLDLVLKDAISNSM 1281
GI+NNGK +FFGCVLL++ET S+ WALQAF++FM+ + P+TIL+DLD+ LKDAIS+ +
Sbjct: 276 LGIENNGKIVFFGCVLLQDETPHSFVWALQAFIRFMKGKCPETILSDLDMGLKDAISSEL 335
Query: 1280 PYTKHVTCIWHIVSKLWSWFSFPLGTRFEEFKSEFERLYNLDTKKDFECQWNQMVTRFAF 1101
P TKHV +W+I+ K++SWFS PLGT++ EFKS+F+ LY ++ ++FE +W+QMV+ F
Sbjct: 336 PSTKHVISMWNILPKVYSWFSLPLGTQYGEFKSKFDELYQIERTEEFELRWSQMVSMFGL 395
Query: 1100 GSNKHISLLFSHRTLWAVSYIRGSFLANMTSTEYFQSMDAFLKRILRSQTNLESFFQQVG 921
GS+KHI+LL S R WA+SY+RG FLA M ++ Y +S+DAFLK + +QT L SFF+Q+G
Sbjct: 396 GSDKHIALLNSLRASWALSYVRGYFLARMATSTYSKSVDAFLKGVCSAQTCLRSFFEQIG 455
Query: 920 IVANYKNQSRDEVVEEVHIKTSMPIEEHASSILTPYAFSLLQREIVLSMQCAAIETANGS 741
I AN+ NQ+ E ++ + +KT +P+E HA ILTP+AFS LQ E+VL+MQ A E A+GS
Sbjct: 456 ISANFLNQTHRE-MQYMLMKTCIPVEGHAHGILTPFAFSALQHELVLAMQYALSEMADGS 514
Query: 740 YVVRHHKKLDGGCLVSWIPKDEKICCSCRENEVSGILCRHALRVLALKNYFHLPEKYLPI 561
Y+V H KK+DG V WIP+DE+I CSC+E E SGILCRHALRV KNYF LPEKY
Sbjct: 515 YLVNHFKKMDGEHFVIWIPEDEQIHCSCKEFESSGILCRHALRVFIQKNYFQLPEKYYLS 574
Query: 560 RWRRECLSI-------QTNSNDWXXXXXXXXXXXFAESSLTKERIDYVHR----ELIRIV 414
RWR++C + Q+N W F ESS+TKER D+VHR EL R++
Sbjct: 575 RWRQDCSLVFYDEQLTQSNDGVWLQEYHSLTETLFRESSITKERFDFVHRELPKELTRLL 634
Query: 413 NNVKTMSPSDGVIFNLEAIP 354
V+ M SDGV NL P
Sbjct: 635 GEVRQMLESDGVAMNLTLSP 654