BLASTX nr result

ID: Coptis24_contig00007891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007891
         (1115 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001048938.1| Os03g0143400 [Oryza sativa Japonica Group] g...   381   e-103
sp|Q05046.1|CH62_CUCMA RecName: Full=Chaperonin CPN60-2, mitocho...   380   e-103
ref|NP_001064784.1| Os10g0462900 [Oryza sativa Japonica Group] g...   377   e-102
ref|XP_002518171.1| chaperonin-60kD, ch60, putative [Ricinus com...   377   e-102
gb|AAP54159.2| Chaperonin CPN60-1, mitochondrial precursor, puta...   377   e-102

>ref|NP_001048938.1| Os03g0143400 [Oryza sativa Japonica Group]
           gi|108706134|gb|ABF93929.1| Chaperonin CPN60-1,
           mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group] gi|113547409|dbj|BAF10852.1|
           Os03g0143400 [Oryza sativa Japonica Group]
           gi|215704319|dbj|BAG93753.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218192069|gb|EEC74496.1| hypothetical protein
           OsI_09970 [Oryza sativa Indica Group]
           gi|222624174|gb|EEE58306.1| hypothetical protein
           OsJ_09368 [Oryza sativa Japonica Group]
           gi|284431758|gb|ADB84620.1| chaperonin [Oryza sativa
           Japonica Group]
          Length = 577

 Score =  381 bits (979), Expect = e-103
 Identities = 192/216 (88%), Positives = 212/216 (98%)
 Frame = +3

Query: 3   CKKVTISKDETVVLDGAGDKKAIEERCELLRSTIELSTSEYDQEKLQERLAKLSGGVAVL 182
           CKKVT+SKD+TV+LDGAGDKKAIEER E LRS IELSTS+YD+EKLQERLAKLSGGVAVL
Sbjct: 351 CKKVTVSKDDTVILDGAGDKKAIEERAEQLRSAIELSTSDYDKEKLQERLAKLSGGVAVL 410

Query: 183 KIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASRELDKLQTANFDQKIG 362
           KIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYAS++LDKLQTANFDQKIG
Sbjct: 411 KIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKDLDKLQTANFDQKIG 470

Query: 363 VQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDNTDLGYDAAKGEYVDMIKAGIVDPLK 542
           VQIIQNALKTPVHTIASNAGVEG+V++GKLLEQDNTDLGYDAAKGEYVDM+K+GI+DPLK
Sbjct: 471 VQIIQNALKTPVHTIASNAGVEGSVIIGKLLEQDNTDLGYDAAKGEYVDMVKSGIIDPLK 530

Query: 543 VIRTALVDAASVSSLMTTTEAVVVELPKEENSSASA 650
           VIRTALVDAASVSSLMTTTE+++VE+PKEE ++A+A
Sbjct: 531 VIRTALVDAASVSSLMTTTESIIVEIPKEEEAAAAA 566


>sp|Q05046.1|CH62_CUCMA RecName: Full=Chaperonin CPN60-2, mitochondrial; AltName:
           Full=HSP60-2; Flags: Precursor gi|478786|pir||S29316
           chaperonin 60 - cucurbit gi|12546|emb|CAA50218.1|
           chaperonin 60 [Cucurbita cv. Kurokawa Amakuri]
          Length = 575

 Score =  380 bits (976), Expect = e-103
 Identities = 195/210 (92%), Positives = 206/210 (98%)
 Frame = +3

Query: 3   CKKVTISKDETVVLDGAGDKKAIEERCELLRSTIELSTSEYDQEKLQERLAKLSGGVAVL 182
           CKK+TISKD+TV+LDGAGDKK+IEERCE +RS IELSTS+YD+EKLQERLAKLSGGVAVL
Sbjct: 351 CKKITISKDDTVILDGAGDKKSIEERCEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVL 410

Query: 183 KIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASRELDKLQTANFDQKIG 362
           KIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYAS+ELDKL TANFDQKIG
Sbjct: 411 KIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLSTANFDQKIG 470

Query: 363 VQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDNTDLGYDAAKGEYVDMIKAGIVDPLK 542
           VQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDN DLGYDAAKGEYVDMIKAGI+DPLK
Sbjct: 471 VQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDNPDLGYDAAKGEYVDMIKAGIIDPLK 530

Query: 543 VIRTALVDAASVSSLMTTTEAVVVELPKEE 632
           VIRTALVDAASVSSLMTTTEA+VVELPK+E
Sbjct: 531 VIRTALVDAASVSSLMTTTEAIVVELPKDE 560


>ref|NP_001064784.1| Os10g0462900 [Oryza sativa Japonica Group]
           gi|22758324|gb|AAN05528.1| mitochondrial chaperonin-60
           [Oryza sativa Japonica Group]
           gi|113639393|dbj|BAF26698.1| Os10g0462900 [Oryza sativa
           Japonica Group] gi|218184691|gb|EEC67118.1| hypothetical
           protein OsI_33923 [Oryza sativa Indica Group]
           gi|222612963|gb|EEE51095.1| hypothetical protein
           OsJ_31804 [Oryza sativa Japonica Group]
           gi|313575773|gb|ADR66966.1| 60 kDa chaperonin [Oryza
           sativa Japonica Group]
          Length = 574

 Score =  377 bits (969), Expect = e-102
 Identities = 192/213 (90%), Positives = 207/213 (97%)
 Frame = +3

Query: 3   CKKVTISKDETVVLDGAGDKKAIEERCELLRSTIELSTSEYDQEKLQERLAKLSGGVAVL 182
           CKKVT+SKD+TV+LDGAGDKK+IEER E +RS IELSTS+YD+EKLQERLAKLSGGVAVL
Sbjct: 351 CKKVTVSKDDTVILDGAGDKKSIEERAEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVL 410

Query: 183 KIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASRELDKLQTANFDQKIG 362
           KIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYAS+ELDKL TANFDQKIG
Sbjct: 411 KIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLPTANFDQKIG 470

Query: 363 VQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDNTDLGYDAAKGEYVDMIKAGIVDPLK 542
           VQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDNTDLGYDAAKGEYVDM+KAGI+DPLK
Sbjct: 471 VQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDNTDLGYDAAKGEYVDMVKAGIIDPLK 530

Query: 543 VIRTALVDAASVSSLMTTTEAVVVELPKEENSS 641
           VIRTALVDAASVSSLMTTTE+++VE+PKEE  +
Sbjct: 531 VIRTALVDAASVSSLMTTTESIIVEIPKEEKEA 563


>ref|XP_002518171.1| chaperonin-60kD, ch60, putative [Ricinus communis]
           gi|223542767|gb|EEF44304.1| chaperonin-60kD, ch60,
           putative [Ricinus communis]
          Length = 574

 Score =  377 bits (969), Expect = e-102
 Identities = 194/213 (91%), Positives = 209/213 (98%)
 Frame = +3

Query: 3   CKKVTISKDETVVLDGAGDKKAIEERCELLRSTIELSTSEYDQEKLQERLAKLSGGVAVL 182
           CKKVT+SKD+TVVLDGAG+KK IEERCE +RSTIELSTS+YD+EKLQERLAKLSGGVAVL
Sbjct: 351 CKKVTVSKDDTVVLDGAGEKKDIEERCEQIRSTIELSTSDYDKEKLQERLAKLSGGVAVL 410

Query: 183 KIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASRELDKLQTANFDQKIG 362
           KIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYA++EL+KLQTANFDQKIG
Sbjct: 411 KIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYATKELEKLQTANFDQKIG 470

Query: 363 VQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDNTDLGYDAAKGEYVDMIKAGIVDPLK 542
           VQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDN DLGYDAAKGEYVDM+KAGI+DPLK
Sbjct: 471 VQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDNYDLGYDAAKGEYVDMVKAGIIDPLK 530

Query: 543 VIRTALVDAASVSSLMTTTEAVVVELPKEENSS 641
           VIRTALVDAASVSSLMTTTEAVV ELPK+E+++
Sbjct: 531 VIRTALVDAASVSSLMTTTEAVVSELPKDESAA 563


>gb|AAP54159.2| Chaperonin CPN60-1, mitochondrial precursor, putative, expressed
            [Oryza sativa Japonica Group]
          Length = 634

 Score =  377 bits (969), Expect = e-102
 Identities = 192/213 (90%), Positives = 207/213 (97%)
 Frame = +3

Query: 3    CKKVTISKDETVVLDGAGDKKAIEERCELLRSTIELSTSEYDQEKLQERLAKLSGGVAVL 182
            CKKVT+SKD+TV+LDGAGDKK+IEER E +RS IELSTS+YD+EKLQERLAKLSGGVAVL
Sbjct: 411  CKKVTVSKDDTVILDGAGDKKSIEERAEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVL 470

Query: 183  KIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASRELDKLQTANFDQKIG 362
            KIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYAS+ELDKL TANFDQKIG
Sbjct: 471  KIGGASEAEVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDKLPTANFDQKIG 530

Query: 363  VQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDNTDLGYDAAKGEYVDMIKAGIVDPLK 542
            VQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDNTDLGYDAAKGEYVDM+KAGI+DPLK
Sbjct: 531  VQIIQNALKTPVHTIASNAGVEGAVVVGKLLEQDNTDLGYDAAKGEYVDMVKAGIIDPLK 590

Query: 543  VIRTALVDAASVSSLMTTTEAVVVELPKEENSS 641
            VIRTALVDAASVSSLMTTTE+++VE+PKEE  +
Sbjct: 591  VIRTALVDAASVSSLMTTTESIIVEIPKEEKEA 623


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