BLASTX nr result

ID: Coptis24_contig00007867 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007867
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529264.1| PREDICTED: putative glutamine amidotransfera...   186   3e-45
ref|XP_002313218.1| predicted protein [Populus trichocarpa] gi|2...   185   7e-45
ref|XP_003531013.1| PREDICTED: putative glutamine amidotransfera...   182   4e-44
emb|CBI38243.3| unnamed protein product [Vitis vinifera]              177   2e-42
ref|XP_002269193.1| PREDICTED: putative glutamine amidotransfera...   177   2e-42

>ref|XP_003529264.1| PREDICTED: putative glutamine amidotransferase YLR126C-like
           [Glycine max]
          Length = 245

 Score =  186 bits (472), Expect = 3e-45
 Identities = 94/140 (67%), Positives = 112/140 (80%), Gaps = 2/140 (1%)
 Frame = +3

Query: 3   QILGRALGGKIGRSLTGWDIGVRPINLSTS-KF-LNSLQLPSKLSVIEFHQDEVIELPPS 176
           QILGRALGGK+ RS TGWD+GVR I LS S +F L+SL LPS+LS+IE H+DE+ ELP  
Sbjct: 104 QILGRALGGKVTRSTTGWDLGVRTITLSPSLRFALSSLDLPSRLSIIECHRDEIRELPAK 163

Query: 177 AEIIAWSEKTGIEMFRSGDHIMGIQGHPEYNKDILRHLMDRSLRRNVIQDNHAEVAMKSI 356
           AE+IAWS+KTGIEMFR GDHIMGIQGHPEY+KDIL HL+DR ++RN I D   + A +  
Sbjct: 164 AEVIAWSDKTGIEMFRYGDHIMGIQGHPEYSKDILLHLIDRLIQRNYIIDAFGKQARERA 223

Query: 357 ESSDPDREAWKKLCKSFLKG 416
              +PDREAWKKLC +FLKG
Sbjct: 224 ALWEPDREAWKKLCVTFLKG 243


>ref|XP_002313218.1| predicted protein [Populus trichocarpa] gi|222849626|gb|EEE87173.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  185 bits (469), Expect = 7e-45
 Identities = 88/139 (63%), Positives = 115/139 (82%), Gaps = 1/139 (0%)
 Frame = +3

Query: 3   QILGRALGGKIGRSLTGWDIGVRPINLS-TSKFLNSLQLPSKLSVIEFHQDEVIELPPSA 179
           QIL RALGGK GR+++GWDIG+R IN S +SK  +S+++P+ LSVIE H+DEV ELP  A
Sbjct: 103 QILCRALGGKTGRAVSGWDIGIRTINFSASSKLSSSVKMPAVLSVIECHRDEVKELPARA 162

Query: 180 EIIAWSEKTGIEMFRSGDHIMGIQGHPEYNKDILRHLMDRSLRRNVIQDNHAEVAMKSIE 359
           E+IAWS+KTG+EMFR GDHIMGIQGHPEY KDIL HL++R L+R+ I D++A+    +++
Sbjct: 163 EVIAWSDKTGVEMFRCGDHIMGIQGHPEYTKDILFHLINRLLQRDFIVDSYADKIKANVD 222

Query: 360 SSDPDREAWKKLCKSFLKG 416
            ++PDREAWKKLC +FLKG
Sbjct: 223 GTEPDREAWKKLCINFLKG 241


>ref|XP_003531013.1| PREDICTED: putative glutamine amidotransferase YLR126C-like
           [Glycine max]
          Length = 244

 Score =  182 bits (462), Expect = 4e-44
 Identities = 93/140 (66%), Positives = 108/140 (77%), Gaps = 2/140 (1%)
 Frame = +3

Query: 3   QILGRALGGKIGRSLTGWDIGVRPINLSTSK--FLNSLQLPSKLSVIEFHQDEVIELPPS 176
           QILGRALGGK+ RS TGWD+GVR I LS S    L SL LPS+LS+IE H+DE+ ELP  
Sbjct: 103 QILGRALGGKVTRSPTGWDLGVRTITLSPSLPFALISLDLPSRLSIIECHRDEIRELPAK 162

Query: 177 AEIIAWSEKTGIEMFRSGDHIMGIQGHPEYNKDILRHLMDRSLRRNVIQDNHAEVAMKSI 356
           AE+IAWS+KTGIEMFR GDHIMGIQGHPEY+KDIL HL+DR ++RN I D   + A    
Sbjct: 163 AEVIAWSDKTGIEMFRYGDHIMGIQGHPEYSKDILFHLIDRLIQRNYIIDAFGKQARDRA 222

Query: 357 ESSDPDREAWKKLCKSFLKG 416
              +PDREAWKKLC +FLKG
Sbjct: 223 ALWEPDREAWKKLCVTFLKG 242


>emb|CBI38243.3| unnamed protein product [Vitis vinifera]
          Length = 299

 Score =  177 bits (448), Expect = 2e-42
 Identities = 84/141 (59%), Positives = 111/141 (78%), Gaps = 3/141 (2%)
 Frame = +3

Query: 3   QILGRALGGKIGRSLTGWDIGVRPINLSTSK---FLNSLQLPSKLSVIEFHQDEVIELPP 173
           QILGRALGGK GR+ +GWDIG R ++LS+S    F ++L+LP++LS+IE H+DEV ELPP
Sbjct: 156 QILGRALGGKTGRAGSGWDIGFRTVHLSSSSSSNFFSTLKLPARLSIIECHRDEVRELPP 215

Query: 174 SAEIIAWSEKTGIEMFRSGDHIMGIQGHPEYNKDILRHLMDRSLRRNVIQDNHAEVAMKS 353
            AEII WSEKTGIEMF+ GDH+MGIQGHPEY  DIL HL+DR L +++I ++ A+     
Sbjct: 216 KAEIIGWSEKTGIEMFKYGDHMMGIQGHPEYTTDILLHLIDRLLLKDLIIESFAKEVRAK 275

Query: 354 IESSDPDREAWKKLCKSFLKG 416
           ++  + DREAW++LC +FLKG
Sbjct: 276 VQECEADREAWRRLCVAFLKG 296


>ref|XP_002269193.1| PREDICTED: putative glutamine amidotransferase YLR126C [Vitis
           vinifera]
          Length = 246

 Score =  177 bits (448), Expect = 2e-42
 Identities = 84/141 (59%), Positives = 111/141 (78%), Gaps = 3/141 (2%)
 Frame = +3

Query: 3   QILGRALGGKIGRSLTGWDIGVRPINLSTSK---FLNSLQLPSKLSVIEFHQDEVIELPP 173
           QILGRALGGK GR+ +GWDIG R ++LS+S    F ++L+LP++LS+IE H+DEV ELPP
Sbjct: 103 QILGRALGGKTGRAGSGWDIGFRTVHLSSSSSSNFFSTLKLPARLSIIECHRDEVRELPP 162

Query: 174 SAEIIAWSEKTGIEMFRSGDHIMGIQGHPEYNKDILRHLMDRSLRRNVIQDNHAEVAMKS 353
            AEII WSEKTGIEMF+ GDH+MGIQGHPEY  DIL HL+DR L +++I ++ A+     
Sbjct: 163 KAEIIGWSEKTGIEMFKYGDHMMGIQGHPEYTTDILLHLIDRLLLKDLIIESFAKEVRAK 222

Query: 354 IESSDPDREAWKKLCKSFLKG 416
           ++  + DREAW++LC +FLKG
Sbjct: 223 VQECEADREAWRRLCVAFLKG 243


Top