BLASTX nr result

ID: Coptis24_contig00007838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007838
         (965 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK93224.1| unknown [Populus trichocarpa]                          244   3e-62
ref|XP_002266597.1| PREDICTED: nascent polypeptide-associated co...   241   1e-61
gb|ABK92784.1| unknown [Populus trichocarpa]                          240   3e-61
ref|XP_002303961.1| predicted protein [Populus trichocarpa] gi|2...   234   2e-59
dbj|BAF46352.1| alpha chain of nascent polypeptide associated co...   234   3e-59

>gb|ABK93224.1| unknown [Populus trichocarpa]
          Length = 205

 Score =  244 bits (622), Expect = 3e-62
 Identities = 127/131 (96%), Positives = 130/131 (99%)
 Frame = -2

Query: 964 LKLGMKAIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQAA 785
           LKLGMK IPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQAA
Sbjct: 75  LKLGMKTIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQAA 134

Query: 784 EQFKAPDLSHVISKPESSAMAQDDEDVDETGVEPKDIELVMTQAGVSRSKAVKALKAADG 605
           EQFKAPDLSHVISKPE+SA+AQDDE+VDETGVEPKDIELVMTQAGVSRSKAVKALKAADG
Sbjct: 135 EQFKAPDLSHVISKPETSAIAQDDEEVDETGVEPKDIELVMTQAGVSRSKAVKALKAADG 194

Query: 604 DIVSAIMELTN 572
           DIVSAIMELTN
Sbjct: 195 DIVSAIMELTN 205


>ref|XP_002266597.1| PREDICTED: nascent polypeptide-associated complex subunit
           alpha-like [Vitis vinifera] gi|298205090|emb|CBI40611.3|
           unnamed protein product [Vitis vinifera]
          Length = 202

 Score =  241 bits (616), Expect = 1e-61
 Identities = 126/131 (96%), Positives = 130/131 (99%)
 Frame = -2

Query: 964 LKLGMKAIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQAA 785
           LKLGMK IPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQAA
Sbjct: 72  LKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQAA 131

Query: 784 EQFKAPDLSHVISKPESSAMAQDDEDVDETGVEPKDIELVMTQAGVSRSKAVKALKAADG 605
           EQFKAPDLS+VI+KPE+S+MAQDDEDVDETGVEPKDIELVMTQAGVSRSKAVKALKAADG
Sbjct: 132 EQFKAPDLSNVIAKPEASSMAQDDEDVDETGVEPKDIELVMTQAGVSRSKAVKALKAADG 191

Query: 604 DIVSAIMELTN 572
           DIVSAIMELTN
Sbjct: 192 DIVSAIMELTN 202


>gb|ABK92784.1| unknown [Populus trichocarpa]
          Length = 204

 Score =  240 bits (613), Expect = 3e-61
 Identities = 125/130 (96%), Positives = 129/130 (99%)
 Frame = -2

Query: 964 LKLGMKAIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQAA 785
           LKLGMK IPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQAA
Sbjct: 74  LKLGMKTIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQAA 133

Query: 784 EQFKAPDLSHVISKPESSAMAQDDEDVDETGVEPKDIELVMTQAGVSRSKAVKALKAADG 605
           EQFKAPDLSHVISKPE+SA+AQDDE+VDETGVEPKDIELVMTQAGVSRSKAVKALKAADG
Sbjct: 134 EQFKAPDLSHVISKPETSAVAQDDEEVDETGVEPKDIELVMTQAGVSRSKAVKALKAADG 193

Query: 604 DIVSAIMELT 575
           DIVSAIM+LT
Sbjct: 194 DIVSAIMDLT 203


>ref|XP_002303961.1| predicted protein [Populus trichocarpa] gi|222841393|gb|EEE78940.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score =  234 bits (597), Expect = 2e-59
 Identities = 122/126 (96%), Positives = 125/126 (99%)
 Frame = -2

Query: 952 MKAIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFK 773
           MK IPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFK
Sbjct: 1   MKTIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFK 60

Query: 772 APDLSHVISKPESSAMAQDDEDVDETGVEPKDIELVMTQAGVSRSKAVKALKAADGDIVS 593
           APDLSHVISKPE+SA+AQDDE+VDETGVEPKDIELVMTQAGVSRSKAVKALKAADGDIVS
Sbjct: 61  APDLSHVISKPETSAIAQDDEEVDETGVEPKDIELVMTQAGVSRSKAVKALKAADGDIVS 120

Query: 592 AIMELT 575
           AIMELT
Sbjct: 121 AIMELT 126


>dbj|BAF46352.1| alpha chain of nascent polypeptide associated complex [Nicotiana
           benthamiana]
          Length = 201

 Score =  234 bits (596), Expect = 3e-59
 Identities = 122/131 (93%), Positives = 127/131 (96%)
 Frame = -2

Query: 964 LKLGMKAIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQAA 785
           LKLGMK IPGVSRVTVKKSKNILFVISKPDVFKSP SDTYVIFGEAKIEDLSSQLQTQAA
Sbjct: 71  LKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPNSDTYVIFGEAKIEDLSSQLQTQAA 130

Query: 784 EQFKAPDLSHVISKPESSAMAQDDEDVDETGVEPKDIELVMTQAGVSRSKAVKALKAADG 605
           EQFKAP+LS+VISKPE S +AQDDEDVD+TGVEPKDIELVMTQAGVSR+KAVKALKAADG
Sbjct: 131 EQFKAPNLSNVISKPEPSTVAQDDEDVDDTGVEPKDIELVMTQAGVSRAKAVKALKAADG 190

Query: 604 DIVSAIMELTN 572
           DIVSAIMELTN
Sbjct: 191 DIVSAIMELTN 201


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