BLASTX nr result
ID: Coptis24_contig00007716
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00007716
(992 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279490.2| PREDICTED: translation initiation factor IF-... 428 e-118
ref|NP_001063668.1| Os09g0515500 [Oryza sativa Japonica Group] g... 397 e-108
gb|EAZ09748.1| hypothetical protein OsI_32038 [Oryza sativa Indi... 397 e-108
ref|XP_002446541.1| hypothetical protein SORBIDRAFT_06g017820 [S... 395 e-108
ref|XP_004173508.1| PREDICTED: translation initiation factor IF-... 395 e-108
>ref|XP_002279490.2| PREDICTED: translation initiation factor IF-2-like [Vitis vinifera]
gi|296089697|emb|CBI39516.3| unnamed protein product
[Vitis vinifera]
Length = 725
Score = 428 bits (1101), Expect = e-118
Identities = 230/330 (69%), Positives = 253/330 (76%)
Frame = -1
Query: 992 PSGASITFLDTPGHXXXXXXXXXXXAVTDIVVLVVAADDGVMPQTLEAMXXXXXXXXXXX 813
PSGASITFLDTPGH AVTD+VVLVVAADDGVMPQTLEAM
Sbjct: 251 PSGASITFLDTPGHAAFSAMRARGAAVTDVVVLVVAADDGVMPQTLEAMSHAKAAKVPIV 310
Query: 812 XXXXKCDKPAADPERVRIQLGSEGLLLEDMGGDVQVVEVSAVTXXXXXXXXXXXXXXXXX 633
KCDKPAADPERV++QL SEGLLLE+MGGDVQVVEVSAV
Sbjct: 311 VAINKCDKPAADPERVKVQLASEGLLLEEMGGDVQVVEVSAVNKTGLDNLEEALLLQADL 370
Query: 632 XXXXARIDGPAQAYVVEARLDRGRGPMATAIVKAGTLMCGQYVVVGAEWGKIRTIRDMLG 453
ARIDGPAQAYVVEARLDRGRGP+ATAIVKAGTL+CGQ+VVVGAEWG+IR IRDM+G
Sbjct: 371 MDLKARIDGPAQAYVVEARLDRGRGPLATAIVKAGTLVCGQHVVVGAEWGRIRAIRDMMG 430
Query: 452 KVKDKALPSMPFEFEGLRGLPMAGDDITVVDSEERARMLSEGRGKKLEKNRLKKIGEGRI 273
+ DKA P+MP E EGLRGLPMAGDDI VV+SEERARMLS GR KK EK+RL+KI EGR
Sbjct: 431 NLTDKAKPAMPVEIEGLRGLPMAGDDIIVVESEERARMLSAGRKKKYEKDRLRKIDEGRT 490
Query: 272 ETPDESEDVPERVELPIIVKADVQGTVQAVTDALKSLNSPQXXXXXXXXXXXXISQSDVD 93
E P+ SEDVPERVE+PIIVKADVQGTVQAVTDALKSLNSPQ ISQSDVD
Sbjct: 491 EAPEPSEDVPERVEMPIIVKADVQGTVQAVTDALKSLNSPQVFVNVVHVGVGPISQSDVD 550
Query: 92 LAQACGACIVGFNIRSPPSSVTQLANRASI 3
LAQAC ACIVGFN+++PP+S++Q A+RASI
Sbjct: 551 LAQACHACIVGFNVKNPPTSLSQAASRASI 580
>ref|NP_001063668.1| Os09g0515500 [Oryza sativa Japonica Group]
gi|50725362|dbj|BAD34434.1| putative translation
initiation factor IF-2 [Oryza sativa Japonica Group]
gi|50726238|dbj|BAD33814.1| putative translation
initiation factor IF-2 [Oryza sativa Japonica Group]
gi|113631901|dbj|BAF25582.1| Os09g0515500 [Oryza sativa
Japonica Group] gi|125606325|gb|EAZ45361.1| hypothetical
protein OsJ_30008 [Oryza sativa Japonica Group]
gi|215686824|dbj|BAG89674.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 716
Score = 397 bits (1019), Expect = e-108
Identities = 215/330 (65%), Positives = 243/330 (73%)
Frame = -1
Query: 992 PSGASITFLDTPGHXXXXXXXXXXXAVTDIVVLVVAADDGVMPQTLEAMXXXXXXXXXXX 813
PSGASITFLDTPGH AVTDIVVLVVAADDGVMPQTLEAM
Sbjct: 242 PSGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAMSHAKAANVPIV 301
Query: 812 XXXXKCDKPAADPERVRIQLGSEGLLLEDMGGDVQVVEVSAVTXXXXXXXXXXXXXXXXX 633
KCDK ADPERVRIQLGSEGLLLEDMGGDVQVVE+SAVT
Sbjct: 302 VAVNKCDKSGADPERVRIQLGSEGLLLEDMGGDVQVVEISAVTKLGLDKLEEALLLQAEI 361
Query: 632 XXXXARIDGPAQAYVVEARLDRGRGPMATAIVKAGTLMCGQYVVVGAEWGKIRTIRDMLG 453
ARIDGPAQA+VVEAR+DRGRGP+ATAIVKAGTL+ GQ++VVGAEWG+IR++RD G
Sbjct: 362 MDLKARIDGPAQAFVVEARVDRGRGPLATAIVKAGTLVSGQHIVVGAEWGRIRSLRDTAG 421
Query: 452 KVKDKALPSMPFEFEGLRGLPMAGDDITVVDSEERARMLSEGRGKKLEKNRLKKIGEGRI 273
K+ + A P+MP E EGLRGLPMAGDD+ VVDSEERARMLS+GR KK EK+RL+KI E
Sbjct: 422 KITESAKPAMPVEIEGLRGLPMAGDDVVVVDSEERARMLSQGRKKKQEKDRLRKIDEDMT 481
Query: 272 ETPDESEDVPERVELPIIVKADVQGTVQAVTDALKSLNSPQXXXXXXXXXXXXISQSDVD 93
E + E+ PERVE+PIIVKADVQG+VQAVTDAL+SLNSPQ ISQ D+D
Sbjct: 482 EEAEIGEETPERVEMPIIVKADVQGSVQAVTDALRSLNSPQVFVNIVHVGVGPISQHDID 541
Query: 92 LAQACGACIVGFNIRSPPSSVTQLANRASI 3
LAQAC A IVGFNIR+PPS++T A +A+I
Sbjct: 542 LAQACRAYIVGFNIRTPPSAITLAATQANI 571
>gb|EAZ09748.1| hypothetical protein OsI_32038 [Oryza sativa Indica Group]
Length = 716
Score = 397 bits (1019), Expect = e-108
Identities = 215/330 (65%), Positives = 243/330 (73%)
Frame = -1
Query: 992 PSGASITFLDTPGHXXXXXXXXXXXAVTDIVVLVVAADDGVMPQTLEAMXXXXXXXXXXX 813
PSGASITFLDTPGH AVTDIVVLVVAADDGVMPQTLEAM
Sbjct: 242 PSGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAMSHAKAANVPIV 301
Query: 812 XXXXKCDKPAADPERVRIQLGSEGLLLEDMGGDVQVVEVSAVTXXXXXXXXXXXXXXXXX 633
KCDK ADPERVRIQLGSEGLLLEDMGGDVQVVE+SAVT
Sbjct: 302 VAVNKCDKSGADPERVRIQLGSEGLLLEDMGGDVQVVEISAVTKLGLDKLEEALLLQAEI 361
Query: 632 XXXXARIDGPAQAYVVEARLDRGRGPMATAIVKAGTLMCGQYVVVGAEWGKIRTIRDMLG 453
ARIDGPAQA+VVEAR+DRGRGP+ATAIVKAGTL+ GQ++VVGAEWG+IR++RD G
Sbjct: 362 MDLKARIDGPAQAFVVEARVDRGRGPLATAIVKAGTLVSGQHIVVGAEWGRIRSLRDTAG 421
Query: 452 KVKDKALPSMPFEFEGLRGLPMAGDDITVVDSEERARMLSEGRGKKLEKNRLKKIGEGRI 273
K+ + A P+MP E EGLRGLPMAGDD+ VVDSEERARMLS+GR KK EK+RL+KI E
Sbjct: 422 KITESAKPAMPVEIEGLRGLPMAGDDVVVVDSEERARMLSQGRKKKQEKDRLRKIDEDMT 481
Query: 272 ETPDESEDVPERVELPIIVKADVQGTVQAVTDALKSLNSPQXXXXXXXXXXXXISQSDVD 93
E + E+ PERVE+PIIVKADVQG+VQAVTDAL+SLNSPQ ISQ D+D
Sbjct: 482 EEAEIGEETPERVEMPIIVKADVQGSVQAVTDALRSLNSPQVFVNIVHVGVGPISQHDID 541
Query: 92 LAQACGACIVGFNIRSPPSSVTQLANRASI 3
LAQAC A IVGFNIR+PPS++T A +A+I
Sbjct: 542 LAQACRAYIVGFNIRTPPSAITLAATQANI 571
>ref|XP_002446541.1| hypothetical protein SORBIDRAFT_06g017820 [Sorghum bicolor]
gi|241937724|gb|EES10869.1| hypothetical protein
SORBIDRAFT_06g017820 [Sorghum bicolor]
Length = 685
Score = 395 bits (1016), Expect = e-108
Identities = 216/330 (65%), Positives = 240/330 (72%)
Frame = -1
Query: 992 PSGASITFLDTPGHXXXXXXXXXXXAVTDIVVLVVAADDGVMPQTLEAMXXXXXXXXXXX 813
PSGASITFLDTPGH AVTDIVVLVVAADDGVMPQTLEAM
Sbjct: 211 PSGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAMSHAKAANVPIV 270
Query: 812 XXXXKCDKPAADPERVRIQLGSEGLLLEDMGGDVQVVEVSAVTXXXXXXXXXXXXXXXXX 633
KCDK ADPERVRIQLGSEGLLLEDMGGDVQVVE+SAV
Sbjct: 271 VAINKCDKSGADPERVRIQLGSEGLLLEDMGGDVQVVEISAVAKSGLDKLEEALLLQAEM 330
Query: 632 XXXXARIDGPAQAYVVEARLDRGRGPMATAIVKAGTLMCGQYVVVGAEWGKIRTIRDMLG 453
ARIDGPAQA+VVEAR+DRGRGP+ATAIVK GTL+ GQ++VVGAEWG+IR++RD G
Sbjct: 331 MDLKARIDGPAQAFVVEARVDRGRGPLATAIVKYGTLVSGQHIVVGAEWGRIRSLRDTAG 390
Query: 452 KVKDKALPSMPFEFEGLRGLPMAGDDITVVDSEERARMLSEGRGKKLEKNRLKKIGEGRI 273
+ A P+MP E EGLRGLPMAGDD+ VVDSEERARMLS+GR KK EK+RL+KI EG
Sbjct: 391 NITQSAKPAMPIEIEGLRGLPMAGDDVVVVDSEERARMLSQGRKKKQEKDRLRKIDEGMA 450
Query: 272 ETPDESEDVPERVELPIIVKADVQGTVQAVTDALKSLNSPQXXXXXXXXXXXXISQSDVD 93
E + E+ PERVE+PIIVKADVQG+VQAVTDAL+SLNS Q ISQ D+D
Sbjct: 451 EELEIKEETPERVEMPIIVKADVQGSVQAVTDALRSLNSAQVFVNVVHVGVGPISQHDID 510
Query: 92 LAQACGACIVGFNIRSPPSSVTQLANRASI 3
LAQACGA IVGFNIRSPP S+TQ A RA+I
Sbjct: 511 LAQACGAYIVGFNIRSPPISITQAAARANI 540
>ref|XP_004173508.1| PREDICTED: translation initiation factor IF-2-like, partial [Cucumis
sativus]
Length = 540
Score = 395 bits (1015), Expect = e-108
Identities = 214/327 (65%), Positives = 244/327 (74%)
Frame = -1
Query: 989 SGASITFLDTPGHXXXXXXXXXXXAVTDIVVLVVAADDGVMPQTLEAMXXXXXXXXXXXX 810
SGASITFLDTPGH AVTDIVVLVVAADDGVMPQTLEAM
Sbjct: 67 SGASITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAMAHAKAANVPIVL 126
Query: 809 XXXKCDKPAADPERVRIQLGSEGLLLEDMGGDVQVVEVSAVTXXXXXXXXXXXXXXXXXX 630
KCDKPAADPERV++QL SEGLLLE+MGGDVQVV VSA+
Sbjct: 127 AINKCDKPAADPERVKLQLASEGLLLEEMGGDVQVVYVSALKKTGLDSLEEALLLQAEMM 186
Query: 629 XXXARIDGPAQAYVVEARLDRGRGPMATAIVKAGTLMCGQYVVVGAEWGKIRTIRDMLGK 450
ARIDGPAQAYVVEARLD+GRGP+AT IVKAGTL GQ+VVVG EWG+IR IRDM+GK
Sbjct: 187 DLKARIDGPAQAYVVEARLDKGRGPLATTIVKAGTLGSGQFVVVGCEWGRIRAIRDMVGK 246
Query: 449 VKDKALPSMPFEFEGLRGLPMAGDDITVVDSEERARMLSEGRGKKLEKNRLKKIGEGRIE 270
+ D+A P+MP E EGLRGLPMAGDDI VV+SEERARMLS GR ++ EK+RLKK+ EG+ E
Sbjct: 247 LADRAGPAMPVEIEGLRGLPMAGDDIIVVESEERARMLSAGRKRRFEKDRLKKLSEGKTE 306
Query: 269 TPDESEDVPERVELPIIVKADVQGTVQAVTDALKSLNSPQXXXXXXXXXXXXISQSDVDL 90
T ++SE+V +RVELPIIVKADVQGTVQAVTDALK+LNSPQ +SQSDVDL
Sbjct: 307 TEEQSEEVVQRVELPIIVKADVQGTVQAVTDALKTLNSPQVFVNVVHVGVGPVSQSDVDL 366
Query: 89 AQACGACIVGFNIRSPPSSVTQLANRA 9
AQAC A IVGFN+++PPSS++Q A +A
Sbjct: 367 AQACKAYIVGFNVKNPPSSISQSATQA 393