BLASTX nr result

ID: Coptis24_contig00007547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007547
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323132.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
ref|XP_002307904.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
gb|ADD09604.1| ferredoxin hydrogenase [Trifolium repens]              100   9e-20
ref|XP_003635380.1| PREDICTED: cytosolic Fe-S cluster assembly f...   100   9e-20
ref|XP_003529671.1| PREDICTED: cytosolic Fe-S cluster assembly f...    98   8e-19

>ref|XP_002323132.1| predicted protein [Populus trichocarpa] gi|222867762|gb|EEF04893.1|
           predicted protein [Populus trichocarpa]
          Length = 471

 Score =  102 bits (254), Expect = 3e-20
 Identities = 41/58 (70%), Positives = 55/58 (94%)
 Frame = -2

Query: 454 VETVHMEDVLVADPFDNRLVKNVYDEWLEQPGSEKAKKYIHTEYHPMAKSITSQLHNW 281
           +ET++ME+VL+ DPF+N LVK++YDEWLE+PGSEKAK+++HTEYHPM KS+T+QLHNW
Sbjct: 414 LETIYMENVLIKDPFENLLVKSLYDEWLEKPGSEKAKRHMHTEYHPMVKSVTAQLHNW 471


>ref|XP_002307904.1| predicted protein [Populus trichocarpa] gi|222853880|gb|EEE91427.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  101 bits (251), Expect = 7e-20
 Identities = 40/58 (68%), Positives = 55/58 (94%)
 Frame = -2

Query: 454 VETVHMEDVLVADPFDNRLVKNVYDEWLEQPGSEKAKKYIHTEYHPMAKSITSQLHNW 281
           +ET++ME++LV DPF+N LVK++YDEWL+QPGSEKAK+++HTEYHP+ KS+T+QLHNW
Sbjct: 421 LETIYMENILVKDPFENPLVKSLYDEWLDQPGSEKAKRHMHTEYHPVVKSVTAQLHNW 478


>gb|ADD09604.1| ferredoxin hydrogenase [Trifolium repens]
          Length = 495

 Score =  100 bits (250), Expect = 9e-20
 Identities = 40/58 (68%), Positives = 54/58 (93%)
 Frame = -2

Query: 454 VETVHMEDVLVADPFDNRLVKNVYDEWLEQPGSEKAKKYIHTEYHPMAKSITSQLHNW 281
           +E+V++E+VL ADPFDN ++K +YD+WLEQPGSEKAK+Y+HT+YHP+ KS+TSQLHNW
Sbjct: 438 LESVYLENVLAADPFDNPIIKGLYDKWLEQPGSEKAKRYMHTQYHPIEKSVTSQLHNW 495


>ref|XP_003635380.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like [Vitis
           vinifera] gi|297744923|emb|CBI38438.3| unnamed protein
           product [Vitis vinifera]
          Length = 478

 Score =  100 bits (250), Expect = 9e-20
 Identities = 43/58 (74%), Positives = 52/58 (89%)
 Frame = -2

Query: 454 VETVHMEDVLVADPFDNRLVKNVYDEWLEQPGSEKAKKYIHTEYHPMAKSITSQLHNW 281
           +E ++ME+V+VADPF N +VK +YDEWLEQPGSEKAK+ IHTEYHP+ KSITSQLHNW
Sbjct: 421 LEAIYMENVVVADPFKNPIVKGLYDEWLEQPGSEKAKRLIHTEYHPVVKSITSQLHNW 478


>ref|XP_003529671.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like
           [Glycine max]
          Length = 474

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 40/58 (68%), Positives = 53/58 (91%)
 Frame = -2

Query: 454 VETVHMEDVLVADPFDNRLVKNVYDEWLEQPGSEKAKKYIHTEYHPMAKSITSQLHNW 281
           +E+V+ME+VLVA PFDN ++K +YD+WLEQPGS KA++Y+HT+YHP+ KSITSQLHNW
Sbjct: 417 LESVYMENVLVASPFDNPIIKGLYDKWLEQPGSVKARRYMHTQYHPVEKSITSQLHNW 474


Top