BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007542
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni...    75   6e-12
emb|CBI17547.3| unnamed protein product [Vitis vinifera]               75   6e-12
emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]    75   6e-12
sp|Q2QKB4.1|U2A2B_WHEAT RecName: Full=Splicing factor U2af large...    75   7e-12
gb|ABU45195.1| unknown [Petunia integrifolia subsp. inflata]           75   7e-12

>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis
           vinifera]
          Length = 568

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
 Frame = -3

Query: 449 ARRVYVDGFSSQTDVQAITIFFNSRISG----SRDPG-AVLHVYLNKQKSFAIVELRSEE 285
           ARRVYV G S   + Q++  FF+  +S     +  PG AV++VY+N +K FA VE+RS E
Sbjct: 233 ARRVYVGGLSPTANEQSVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 292

Query: 284 EAIAALELDCKLFKGTMLRIRHPSDYNRMLDPDFIPS 174
           EA  A+ LD  +F+G  +++R PSDYN  L     PS
Sbjct: 293 EASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPS 329


>emb|CBI17547.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
 Frame = -3

Query: 449 ARRVYVDGFSSQTDVQAITIFFNSRISG----SRDPG-AVLHVYLNKQKSFAIVELRSEE 285
           ARRVYV G S   + Q++  FF+  +S     +  PG AV++VY+N +K FA VE+RS E
Sbjct: 58  ARRVYVGGLSPTANEQSVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 117

Query: 284 EAIAALELDCKLFKGTMLRIRHPSDYNRMLDPDFIPS 174
           EA  A+ LD  +F+G  +++R PSDYN  L     PS
Sbjct: 118 EASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPS 154


>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
          Length = 565

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
 Frame = -3

Query: 449 ARRVYVDGFSSQTDVQAITIFFNSRISG----SRDPG-AVLHVYLNKQKSFAIVELRSEE 285
           ARRVYV G S   + Q++  FF+  +S     +  PG AV++VY+N +K FA VE+RS E
Sbjct: 230 ARRVYVGGLSPTANEQSVATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVE 289

Query: 284 EAIAALELDCKLFKGTMLRIRHPSDYNRMLDPDFIPS 174
           EA  A+ LD  +F+G  +++R PSDYN  L     PS
Sbjct: 290 EASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPS 326


>sp|Q2QKB4.1|U2A2B_WHEAT RecName: Full=Splicing factor U2af large subunit B; AltName:
           Full=U2 auxiliary factor 65 kDa subunit B; AltName:
           Full=U2 small nuclear ribonucleoprotein auxiliary factor
           large subunit B; Short=U2 snRNP auxiliary factor large
           subunit B gi|68036764|gb|AAY84880.1| U2AF large subunit
           [Triticum aestivum]
          Length = 543

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/97 (44%), Positives = 59/97 (60%), Gaps = 5/97 (5%)
 Frame = -3

Query: 449 ARRVYVDGFSSQTDVQAITIFFNSRISG----SRDPG-AVLHVYLNKQKSFAIVELRSEE 285
           ARRVYV G     + Q++ I+FN  ++     +  PG AVL+VY+N  K FA VE+RS E
Sbjct: 206 ARRVYVGGLPPSANEQSVAIYFNQVMAAIGGNTAGPGDAVLNVYINHDKKFAFVEMRSVE 265

Query: 284 EAIAALELDCKLFKGTMLRIRHPSDYNRMLDPDFIPS 174
           EA  A+ LD  LF+G  +++R P+DYN  L     PS
Sbjct: 266 EASNAMALDGILFEGAPVKVRRPTDYNPSLAAALGPS 302


>gb|ABU45195.1| unknown [Petunia integrifolia subsp. inflata]
          Length = 506

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
 Frame = -3

Query: 449 ARRVYVDGFSSQTDVQAITIFFNSRI----SGSRDPG-AVLHVYLNKQKSFAIVELRSEE 285
           ARRVYV G  S  + Q++  FF+  +      +  PG AV+ VY+N +K FA VE+RS E
Sbjct: 173 ARRVYVGGLPSSANEQSVATFFSHVMYAIGGNTAGPGDAVIDVYINHEKKFAFVEMRSVE 232

Query: 284 EAIAALELDCKLFKGTMLRIRHPSDYNRMLDPDFIPS 174
           EA  A+ LD  +F+G  +R+R PSDYN  L     PS
Sbjct: 233 EASNAMALDGVIFEGEPVRVRRPSDYNASLAATLGPS 269