BLASTX nr result

ID: Coptis24_contig00007466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007466
         (1000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237363.1| uncharacterized protein LOC100500138 [Glycin...   262   7e-84
ref|XP_003523692.1| PREDICTED: uncharacterized protein LOC100784...   259   7e-83
ref|XP_002515540.1| conserved hypothetical protein [Ricinus comm...   265   2e-81
gb|ABK96125.1| unknown [Populus trichocarpa] gi|118489048|gb|ABK...   270   5e-81
ref|XP_004138732.1| PREDICTED: uncharacterized protein LOC101218...   261   5e-81

>ref|NP_001237363.1| uncharacterized protein LOC100500138 [Glycine max]
           gi|255629430|gb|ACU15061.1| unknown [Glycine max]
          Length = 228

 Score =  262 bits (670), Expect(2) = 7e-84
 Identities = 128/162 (79%), Positives = 145/162 (89%), Gaps = 4/162 (2%)
 Frame = -3

Query: 758 RSGMCTTPIEVTSSQLIASEIFPFGVVKALLYPGAVANGLIRNRTVPKWDNVLNIYNLTE 579
           RSGMCTTP+ VTSSQLIASEIFP  VVK LLYPGA  NGLI N TVP WDN+L++YNLT 
Sbjct: 57  RSGMCTTPLHVTSSQLIASEIFPVVVVKGLLYPGAAVNGLIHNMTVPSWDNLLDLYNLTS 116

Query: 578 VKEASPVTDLQRLEVLAGSYFSVAGALVGLLKPGRMSMFGTLLVIWGLVKEGLLGKPVNT 399
           VKEAS VTDLQRLEVLAGSYF+VAGALVG+LKPGRMSMFG+LL+IWGLVKEG+LGKPVNT
Sbjct: 117 VKEASAVTDLQRLEVLAGSYFTVAGALVGILKPGRMSMFGSLLIIWGLVKEGILGKPVNT 176

Query: 398 DPAKAVFVYPTMLIALVCAFSCIKYDVNKIVKSSP----ARP 285
           DPAKAV+VYPTM+IA++CAFS +KYDV K+V+S+P    ARP
Sbjct: 177 DPAKAVYVYPTMVIAMICAFSSVKYDVKKVVRSAPIMSSARP 218



 Score = 75.9 bits (185), Expect(2) = 7e-84
 Identities = 37/48 (77%), Positives = 42/48 (87%), Gaps = 3/48 (6%)
 Frame = -2

Query: 945 SVSAMAS---SRKWTNNITSIASRVFFLLIIFQVPLFRVTCRSGMCTT 811
           SVS MA+   S KWT NI+SIA+R+FFLLIIFQ+PLFRVTCRSGMCTT
Sbjct: 16  SVSTMATPKASSKWTENISSIAARIFFLLIIFQIPLFRVTCRSGMCTT 63


>ref|XP_003523692.1| PREDICTED: uncharacterized protein LOC100784749 [Glycine max]
          Length = 245

 Score =  259 bits (663), Expect(2) = 7e-83
 Identities = 124/157 (78%), Positives = 143/157 (91%)
 Frame = -3

Query: 758 RSGMCTTPIEVTSSQLIASEIFPFGVVKALLYPGAVANGLIRNRTVPKWDNVLNIYNLTE 579
           RSGMCTTP+ VTSSQLIASEIFP  VVK LLYPGA  NGLI N TVP WD++L++YNLT 
Sbjct: 74  RSGMCTTPLHVTSSQLIASEIFPVVVVKGLLYPGAAVNGLIHNMTVPSWDSLLDLYNLTG 133

Query: 578 VKEASPVTDLQRLEVLAGSYFSVAGALVGLLKPGRMSMFGTLLVIWGLVKEGLLGKPVNT 399
           VKEAS VTDLQRLEVLAGSYF+VAGALVG+LKPGRMSMFG+LL+IWGLVKEG+LGKPVNT
Sbjct: 134 VKEASAVTDLQRLEVLAGSYFTVAGALVGILKPGRMSMFGSLLIIWGLVKEGILGKPVNT 193

Query: 398 DPAKAVFVYPTMLIALVCAFSCIKYDVNKIVKSSPAR 288
           DPAKAV+VYPTM+IA++CAFS +KYDV K+V+S+P +
Sbjct: 194 DPAKAVYVYPTMVIAMICAFSSVKYDVKKVVRSAPIK 230



 Score = 75.1 bits (183), Expect(2) = 7e-83
 Identities = 36/48 (75%), Positives = 42/48 (87%), Gaps = 3/48 (6%)
 Frame = -2

Query: 945 SVSAMASSR---KWTNNITSIASRVFFLLIIFQVPLFRVTCRSGMCTT 811
           SVS MA+     KWT+N++SIASR+FFLLIIFQ+PLFRVTCRSGMCTT
Sbjct: 33  SVSTMATPTAPSKWTDNVSSIASRIFFLLIIFQIPLFRVTCRSGMCTT 80


>ref|XP_002515540.1| conserved hypothetical protein [Ricinus communis]
           gi|223545484|gb|EEF46989.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 212

 Score =  265 bits (678), Expect(2) = 2e-81
 Identities = 126/158 (79%), Positives = 146/158 (92%)
 Frame = -3

Query: 758 RSGMCTTPIEVTSSQLIASEIFPFGVVKALLYPGAVANGLIRNRTVPKWDNVLNIYNLTE 579
           RSGMC+TPI VTSSQLIASEIFP  VVKALLYPGA+ANGL+RN TVP W+++L+IYNLT 
Sbjct: 41  RSGMCSTPIHVTSSQLIASEIFPAPVVKALLYPGAIANGLVRNMTVPSWNSLLDIYNLTN 100

Query: 578 VKEASPVTDLQRLEVLAGSYFSVAGALVGLLKPGRMSMFGTLLVIWGLVKEGLLGKPVNT 399
            KEA  VTDLQRLEVLAGSYFSVAGALVG+LKPGRMSMFGTLLVIWGLVKEG+LGKP+NT
Sbjct: 101 AKEAPAVTDLQRLEVLAGSYFSVAGALVGILKPGRMSMFGTLLVIWGLVKEGILGKPINT 160

Query: 398 DPAKAVFVYPTMLIALVCAFSCIKYDVNKIVKSSPARP 285
           DP+KAV+VYPTM++A++CAFS +KYD  K+V+S+PARP
Sbjct: 161 DPSKAVYVYPTMVLAVICAFSSVKYDAKKVVRSAPARP 198



 Score = 64.3 bits (155), Expect(2) = 2e-81
 Identities = 27/43 (62%), Positives = 35/43 (81%)
 Frame = -2

Query: 939 SAMASSRKWTNNITSIASRVFFLLIIFQVPLFRVTCRSGMCTT 811
           +A A+SR W  N+ SIASR++F L+I QVPLFR+ CRSGMC+T
Sbjct: 5   AATAASRGWVRNLPSIASRIYFFLVILQVPLFRIPCRSGMCST 47


>gb|ABK96125.1| unknown [Populus trichocarpa] gi|118489048|gb|ABK96331.1| unknown
           [Populus trichocarpa x Populus deltoides]
          Length = 220

 Score =  270 bits (690), Expect(2) = 5e-81
 Identities = 131/158 (82%), Positives = 143/158 (90%)
 Frame = -3

Query: 758 RSGMCTTPIEVTSSQLIASEIFPFGVVKALLYPGAVANGLIRNRTVPKWDNVLNIYNLTE 579
           RSGMC+TPI VTSSQLIASEIFP  VVKALLYPGAV NGL+RN TVP WD +LNIYNLT 
Sbjct: 49  RSGMCSTPIHVTSSQLIASEIFPVPVVKALLYPGAVVNGLVRNMTVPSWDKLLNIYNLTS 108

Query: 578 VKEASPVTDLQRLEVLAGSYFSVAGALVGLLKPGRMSMFGTLLVIWGLVKEGLLGKPVNT 399
            KEA  VTDLQRLEVLAGSYFSVAGALVG+LKPGRMSMFGTLL+IWGLVKEG+LGKP NT
Sbjct: 109 AKEAPAVTDLQRLEVLAGSYFSVAGALVGILKPGRMSMFGTLLIIWGLVKEGILGKPANT 168

Query: 398 DPAKAVFVYPTMLIALVCAFSCIKYDVNKIVKSSPARP 285
           DPAKAV+VYPTMLIALVCAFS +KYD+ K+V+S+P RP
Sbjct: 169 DPAKAVYVYPTMLIALVCAFSAVKYDMKKVVRSAPPRP 206



 Score = 58.5 bits (140), Expect(2) = 5e-81
 Identities = 23/43 (53%), Positives = 32/43 (74%)
 Frame = -2

Query: 939 SAMASSRKWTNNITSIASRVFFLLIIFQVPLFRVTCRSGMCTT 811
           +A    R W +N+TS A+R++F +I  QVPLFR+ CRSGMC+T
Sbjct: 13  TATTRRRSWVSNLTSYAARIYFFIIFLQVPLFRIPCRSGMCST 55


>ref|XP_004138732.1| PREDICTED: uncharacterized protein LOC101218289 [Cucumis sativus]
           gi|449523273|ref|XP_004168648.1| PREDICTED:
           uncharacterized LOC101218289 [Cucumis sativus]
          Length = 215

 Score =  261 bits (668), Expect(2) = 5e-81
 Identities = 124/158 (78%), Positives = 141/158 (89%)
 Frame = -3

Query: 758 RSGMCTTPIEVTSSQLIASEIFPFGVVKALLYPGAVANGLIRNRTVPKWDNVLNIYNLTE 579
           RSGMCT+P+ VTSSQLIASE+FP  VVKALLYPGAV NGL+ N TVP W N+ +IYNLT 
Sbjct: 44  RSGMCTSPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPSWSNLFDIYNLTN 103

Query: 578 VKEASPVTDLQRLEVLAGSYFSVAGALVGLLKPGRMSMFGTLLVIWGLVKEGLLGKPVNT 399
           +KEAS VTDLQRLEVLAGSYFSVAGA VGLLKPGRMSMFGTLLVIWGLVKEG+LGKPVNT
Sbjct: 104 IKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNT 163

Query: 398 DPAKAVFVYPTMLIALVCAFSCIKYDVNKIVKSSPARP 285
           DP KAV+VYPTM++A++CAFS +KYDV K+ + +PARP
Sbjct: 164 DPVKAVYVYPTMILAVICAFSSVKYDVKKVARGAPARP 201



 Score = 67.0 bits (162), Expect(2) = 5e-81
 Identities = 29/47 (61%), Positives = 38/47 (80%)
 Frame = -2

Query: 951 SISVSAMASSRKWTNNITSIASRVFFLLIIFQVPLFRVTCRSGMCTT 811
           S S S   +S+ W  N++SIASRV+FLLII Q+PLFR++CRSGMCT+
Sbjct: 4   STSSSTSTASKSWIRNLSSIASRVYFLLIILQIPLFRISCRSGMCTS 50


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