BLASTX nr result

ID: Coptis24_contig00007448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007448
         (2456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278147.1| PREDICTED: uncharacterized protein LOC100244...   583   e-164
emb|CBI27815.3| unnamed protein product [Vitis vinifera]              576   e-162
ref|XP_003546506.1| PREDICTED: uncharacterized F-box/LRR-repeat ...   558   e-156
ref|XP_002516283.1| rad7, putative [Ricinus communis] gi|2235447...   536   e-150
ref|XP_003551123.1| PREDICTED: DNA repair protein rhp7-like [Gly...   522   e-145

>ref|XP_002278147.1| PREDICTED: uncharacterized protein LOC100244043 [Vitis vinifera]
          Length = 905

 Score =  583 bits (1502), Expect = e-164
 Identities = 338/698 (48%), Positives = 442/698 (63%), Gaps = 11/698 (1%)
 Frame = +1

Query: 103  ESDSVEVIDLDELDMRQSLIGSTGDRNGK---ENTYKDSESVSLGLSIGGWRSTRRRVRV 273
            ESD  + +   E       +   G  NG+   E   KD  +   G S+ G    RRR   
Sbjct: 235  ESDGGKYVVEQERGGEDKGVKVQGHGNGEAAVEELQKDPSANENG-SVRG----RRRFTG 289

Query: 274  EENESDELVSNVRDADEVDKETKPSLSGETGDG-DTLETMETSLGLGRRKYSREEKGKGI 450
            EE    +LV +    + +D   +  L+ E  +  D +   E     G ++YSREEKGKGI
Sbjct: 290  EEKGKGKLVEDDEPQNRIDA-VELDLNLELKNVIDNMSADENDAVEGGQRYSREEKGKGI 348

Query: 451  L-DLNLPPEEQPEPKLGVDPVELNLFPVEENPAKDFSDSTQDAATSLIXXXXXXXXXXXX 627
            L + +L P         V+PV+ NL    E+  K+  D+    +  L             
Sbjct: 349  LINDDLAPN-------AVNPVDFNL----ESEVKNSVDTAVSESIQLEGNVGLQVQNEVI 397

Query: 628  XXXXXXVRSKAHRRRGDRNRFQDVAKHSGPKFAHFHAXXXXXX-----INVAAPSADELP 792
                  + S+A      R RF+D+A+ +  +FAHF               +  PS     
Sbjct: 398  QTSVTGIASRA------RTRFRDIARRNASRFAHFAPEQEMENHPSREAEIQRPSEGGEK 451

Query: 793  EIEDWPGPFSTAMKIIKDRSTKLNGRQATLTQGSSKTTPV-IQWMPSTDRNRNPMKPFVP 969
            E EDWPGPFSTAMKIIKDR  K N +Q      S +  P  + W P   ++    KP  P
Sbjct: 452  ENEDWPGPFSTAMKIIKDREKKQNTQQ---NSSSDRNRPAHVIWSPRKVKSSECPKPLAP 508

Query: 970  SLQDLCVSLLAKNAEAIVSLKNVPDDLRNTLTKLLCDSRKMDSHVMDLLVAESPDVVRVK 1149
            SLQ++C+ +LA+N +AI SL+++PD LR+ L++LLCDSR+M+SH+++LLV+ SP  V V+
Sbjct: 509  SLQEMCLEVLAQNGDAITSLESIPDALRHKLSQLLCDSRRMNSHILELLVSGSPFEVCVR 568

Query: 1150 DCSWMTEEQMSKTFGECDTSKLVVLQLDLCGRCLPDYVLRATLARSPKSLPCLAAVSLRG 1329
            DCSW+TEE+ ++ F  CDT+ L VLQLD CGRC+ DYVLRAT       LP L  VSL+G
Sbjct: 569  DCSWLTEEEFARIFKRCDTNSLTVLQLDQCGRCMTDYVLRATFDMLSNGLPALTTVSLKG 628

Query: 1330 ACRVTDAGLSSLVASAPCLRSINLGQCSLITSTGIDTIANSLGLLVRELYLDDCQSIDVM 1509
            ACR++DAGL +LV+SAP LRSINL QCSL+TS  I  +A +LG ++RELY+DDCQ ID M
Sbjct: 629  ACRLSDAGLRALVSSAPMLRSINLSQCSLLTSASIKNLAETLGSVLRELYIDDCQGIDAM 688

Query: 1510 LILSALKKLKCLEVLSVADMETVCDDFICQLVTECGPNMKELCLANCVKLTDISLKAIAE 1689
            LILSAL+KL+CLEVLSVA ++TVCDDFI + ++  GP MKEL L +C +LTD SLKAIAE
Sbjct: 689  LILSALEKLECLEVLSVAGIQTVCDDFIWEFISVHGPTMKELVLTDCSRLTDFSLKAIAE 748

Query: 1690 KCSGLCALDLTNLRKLSDFSIGHIANGCPLIEKLKLCRNTLSDEAIAAFLEASGESLTEL 1869
             C  L ALDL NL KL+D + G++A+GC  ++ LKL  N+ SDEAIAAFLE SG SL EL
Sbjct: 749  TCPELRALDLGNLCKLTDSAFGYLASGCQAMQTLKLRCNSFSDEAIAAFLEISGGSLKEL 808

Query: 1870 SLNNIKKVGPNTAISLARRCTRNLLTLDLSWCRNLTDEAVGYIVDGCLSLRLIKLFGCTQ 2049
            SLNN+ K+G NTAISLARR +R L+ LDLSWCRNLTD  +G+IVD CLSLR++KLFGCTQ
Sbjct: 809  SLNNVSKIGHNTAISLARR-SRELIRLDLSWCRNLTDGDLGFIVDSCLSLRVLKLFGCTQ 867

Query: 2050 ISNAFLEGHSNPFVRIVGLKTTPILEHLNVFDPLEGPL 2163
            I+N F++GHSNP V I+GLK TPIL+HL + DP   PL
Sbjct: 868  ITNMFVDGHSNPQVEIIGLKLTPILKHLKLTDPQSFPL 905


>emb|CBI27815.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  576 bits (1485), Expect = e-162
 Identities = 332/712 (46%), Positives = 438/712 (61%), Gaps = 9/712 (1%)
 Frame = +1

Query: 55   TLKADDSGLDMAKRAKESDSVEVIDLDELDMRQSLIGSTGDRNGKENTYKDSESVSLGLS 234
            T +++D       + K   S E   LD+ D      G  G R+GK    K  + +  G+ 
Sbjct: 182  TQRSEDMVTVKQSKGKRKLSFEASPLDDEDK-----GFLGLRSGK----KIVKEIMCGVD 232

Query: 235  IGGWRSTRRRVRVEENESDELVSNVRDADEVDKETKPSLSGETGDGDTLE---TMETSLG 405
                       R+E +    +V   R  ++   + +   +GE    +  +     E    
Sbjct: 233  -----------RIESDGGKYVVEQERGGEDKGVKVQGHGNGEAAVEELQKDPSANENGSV 281

Query: 406  LGRRKYSREEKGKGILDLNLPPEEQPEPKLGVDPVELNLFPVEENPAKDFSDSTQDAATS 585
             GRR+++ EEKGKG L       E  EP+  +D VEL+L    +N   + S    DA  +
Sbjct: 282  RGRRRFTGEEKGKGKL------VEDDEPQNRIDAVELDLNLELKNVIDNMSADENDAVEA 335

Query: 586  LIXXXXXXXXXXXXXXXXXXVRSKAHRRRGDRNRFQDVAKHSGPKFAHFHAXXXXXX--- 756
                                           R RF+D+A+ +  +FAHF           
Sbjct: 336  -------------------------------RTRFRDIARRNASRFAHFAPEQEMENHPS 364

Query: 757  --INVAAPSADELPEIEDWPGPFSTAMKIIKDRSTKLNGRQATLTQGSSKTTPV-IQWMP 927
                +  PS     E EDWPGPFSTAMKIIKDR  K N +Q      S +  P  + W P
Sbjct: 365  REAEIQRPSEGGEKENEDWPGPFSTAMKIIKDREKKQNTQQ---NSSSDRNRPAHVIWSP 421

Query: 928  STDRNRNPMKPFVPSLQDLCVSLLAKNAEAIVSLKNVPDDLRNTLTKLLCDSRKMDSHVM 1107
               ++    KP  PSLQ++C+ +LA+N +AI SL+++PD LR+ L++LLCDSR+M+SH++
Sbjct: 422  RKVKSSECPKPLAPSLQEMCLEVLAQNGDAITSLESIPDALRHKLSQLLCDSRRMNSHIL 481

Query: 1108 DLLVAESPDVVRVKDCSWMTEEQMSKTFGECDTSKLVVLQLDLCGRCLPDYVLRATLARS 1287
            +LLV+ SP  V V+DCSW+TEE+ ++ F  CDT+ L VLQLD CGRC+ DYVLRAT    
Sbjct: 482  ELLVSGSPFEVCVRDCSWLTEEEFARIFKRCDTNSLTVLQLDQCGRCMTDYVLRATFDML 541

Query: 1288 PKSLPCLAAVSLRGACRVTDAGLSSLVASAPCLRSINLGQCSLITSTGIDTIANSLGLLV 1467
               LP L  VSL+GACR++DAGL +LV+SAP LRSINL QCSL+TS  I  +A +LG ++
Sbjct: 542  SNGLPALTTVSLKGACRLSDAGLRALVSSAPMLRSINLSQCSLLTSASIKNLAETLGSVL 601

Query: 1468 RELYLDDCQSIDVMLILSALKKLKCLEVLSVADMETVCDDFICQLVTECGPNMKELCLAN 1647
            RELY+DDCQ ID MLILSAL+KL+CLEVLSVA ++TVCDDFI + ++  GP MKEL L +
Sbjct: 602  RELYIDDCQGIDAMLILSALEKLECLEVLSVAGIQTVCDDFIWEFISVHGPTMKELVLTD 661

Query: 1648 CVKLTDISLKAIAEKCSGLCALDLTNLRKLSDFSIGHIANGCPLIEKLKLCRNTLSDEAI 1827
            C +LTD SLKAIAE C  L ALDL NL KL+D + G++A+GC  ++ LKL  N+ SDEAI
Sbjct: 662  CSRLTDFSLKAIAETCPELRALDLGNLCKLTDSAFGYLASGCQAMQTLKLRCNSFSDEAI 721

Query: 1828 AAFLEASGESLTELSLNNIKKVGPNTAISLARRCTRNLLTLDLSWCRNLTDEAVGYIVDG 2007
            AAFLE SG SL ELSLNN+ K+G NTAISLARR +R L+ LDLSWCRNLTD  +G+IVD 
Sbjct: 722  AAFLEISGGSLKELSLNNVSKIGHNTAISLARR-SRELIRLDLSWCRNLTDGDLGFIVDS 780

Query: 2008 CLSLRLIKLFGCTQISNAFLEGHSNPFVRIVGLKTTPILEHLNVFDPLEGPL 2163
            CLSLR++KLFGCTQI+N F++GHSNP V I+GLK TPIL+HL + DP   PL
Sbjct: 781  CLSLRVLKLFGCTQITNMFVDGHSNPQVEIIGLKLTPILKHLKLTDPQSFPL 832


>ref|XP_003546506.1| PREDICTED: uncharacterized F-box/LRR-repeat protein C02F5.7-like
            [Glycine max]
          Length = 541

 Score =  558 bits (1437), Expect = e-156
 Identities = 280/512 (54%), Positives = 370/512 (72%)
 Frame = +1

Query: 649  RSKAHRRRGDRNRFQDVAKHSGPKFAHFHAXXXXXXINVAAPSADELPEIEDWPGPFSTA 828
            R   + R     RF D+A+ +  +FA F         + + P   E  EIEDWPGPFSTA
Sbjct: 33   RGSGYGRNDYMERFHDIARENASRFAFFAPEGEDH--DRSPPVEPERDEIEDWPGPFSTA 90

Query: 829  MKIIKDRSTKLNGRQATLTQGSSKTTPVIQWMPSTDRNRNPMKPFVPSLQDLCVSLLAKN 1008
            MKII+DR +KL   +A+     +     I+W+P+  R    +   VPSLQ++C+ +L KN
Sbjct: 91   MKIIRDRGSKLQNAEAS---SQASLCESIKWVPNAKRGNAGVNVSVPSLQEMCLKILVKN 147

Query: 1009 AEAIVSLKNVPDDLRNTLTKLLCDSRKMDSHVMDLLVAESPDVVRVKDCSWMTEEQMSKT 1188
             +AI SL++VPD LR+ L++LLCDSR+++ H ++LLV  +P  +R++DCSW+TEEQ +++
Sbjct: 148  VDAIASLESVPDALRHRLSQLLCDSRRINGHFLELLVRGTPTEIRLRDCSWLTEEQFTES 207

Query: 1189 FGECDTSKLVVLQLDLCGRCLPDYVLRATLARSPKSLPCLAAVSLRGACRVTDAGLSSLV 1368
            F  CDT  LVVLQLD CGRCLPDYV+ +TLA+SP+ L  L+ +SL GACR++D GL +LV
Sbjct: 208  FRTCDTENLVVLQLDQCGRCLPDYVVVSTLAQSPRHLSSLSTLSLSGACRLSDGGLRALV 267

Query: 1369 ASAPCLRSINLGQCSLITSTGIDTIANSLGLLVRELYLDDCQSIDVMLILSALKKLKCLE 1548
            +SAP LRSINL QCSL+TS+ +  +A SL  L++ELYLDDCQ ID  LI+ AL +L+ LE
Sbjct: 268  SSAPALRSINLSQCSLLTSSSVYILAESLKSLLKELYLDDCQGIDAALIVPALIELEHLE 327

Query: 1549 VLSVADMETVCDDFICQLVTECGPNMKELCLANCVKLTDISLKAIAEKCSGLCALDLTNL 1728
            VLSVA ++TVCD+F+   +   G NMKEL L +C+ LTD S+KAI E C GLC LDL NL
Sbjct: 328  VLSVAGIQTVCDEFVKNYIVARGQNMKELVLKDCINLTDASIKAIVEHCPGLCVLDLMNL 387

Query: 1729 RKLSDFSIGHIANGCPLIEKLKLCRNTLSDEAIAAFLEASGESLTELSLNNIKKVGPNTA 1908
             KL+D SIGH+ANGC  +  LKLCRN  SDEAIAAF+E +G SL ELSLNNIKKVG +T 
Sbjct: 388  HKLTDLSIGHLANGCRALHTLKLCRNPFSDEAIAAFVETTGGSLKELSLNNIKKVGYHTT 447

Query: 1909 ISLARRCTRNLLTLDLSWCRNLTDEAVGYIVDGCLSLRLIKLFGCTQISNAFLEGHSNPF 2088
            +SLA    +NL +LDLSWCRNLTD A+G IVD CL+LR +KLFGC+Q+++AFL GHSN  
Sbjct: 448  LSLANH-AKNLHSLDLSWCRNLTDNALGLIVDSCLALRSLKLFGCSQVTDAFLNGHSNLQ 506

Query: 2089 VRIVGLKTTPILEHLNVFDPLEGPLRYSSVPI 2184
            ++I+GLK +P+LEH+ V DP +G L YSSV +
Sbjct: 507  IQIIGLKMSPVLEHVKVPDPHQGALNYSSVSV 538


>ref|XP_002516283.1| rad7, putative [Ricinus communis] gi|223544769|gb|EEF46285.1| rad7,
            putative [Ricinus communis]
          Length = 765

 Score =  536 bits (1382), Expect = e-150
 Identities = 291/551 (52%), Positives = 376/551 (68%), Gaps = 4/551 (0%)
 Frame = +1

Query: 412  RRKYSREEKGKGILDLNLPPEEQPEPKLGVDPVELNLFPVEENPAKDFSDSTQDAATSLI 591
            +R+YSREEKGK  LD     ++     +G D +EL      ++  K+   S  +    L 
Sbjct: 182  KRRYSREEKGKANLD-----DDGLSNSIGKDELEL------QSKVKELGHSLGENVVLLP 230

Query: 592  XXXXXXXXXXXXXXXXXXVRSKAHRRRGDRNRFQDVAKHSGPKFAHFHAXXXXXXI---- 759
                                + +++     ++F+D+A  +  +FA F             
Sbjct: 231  GNERQTMNI-----------NTSNKNESRMDQFRDIATRNASRFAQFDRQEDENLPSEVD 279

Query: 760  NVAAPSADELPEIEDWPGPFSTAMKIIKDRSTKLNGRQATLTQGSSKTTPVIQWMPSTDR 939
            NV   S +E   IEDWPGPFSTAMKII+DR+   N +Q   T    ++ P I W+P+ +R
Sbjct: 280  NVEISSVEENERIEDWPGPFSTAMKIIRDRANMRNSQQGASTLEKPQSVP-ITWVPTRNR 338

Query: 940  NRNPMKPFVPSLQDLCVSLLAKNAEAIVSLKNVPDDLRNTLTKLLCDSRKMDSHVMDLLV 1119
                 +  VPSLQ+LC+ ++ KN +A+ SL +VPD LR+ L +LLCD RKM+S  +DLLV
Sbjct: 339  QS---RTCVPSLQELCMRIIVKNVDAVTSLDHVPDALRHRLCQLLCDCRKMNSSFLDLLV 395

Query: 1120 AESPDVVRVKDCSWMTEEQMSKTFGECDTSKLVVLQLDLCGRCLPDYVLRATLARSPKSL 1299
              SP  +RVKDCSWM+EE++ K F  CDT+ L VLQLD CGRC+PDYV+ ATLARS +SL
Sbjct: 396  RGSPTEIRVKDCSWMSEEELVKCFEGCDTNNLSVLQLDQCGRCMPDYVIPATLARSSRSL 455

Query: 1300 PCLAAVSLRGACRVTDAGLSSLVASAPCLRSINLGQCSLITSTGIDTIANSLGLLVRELY 1479
            P L  +SL GACR++D GLS LVASA  LRSINL QCS +TST I T+A+SLG ++RELY
Sbjct: 456  PALITLSLCGACRLSDIGLSLLVASATSLRSINLSQCSHLTSTSIGTLADSLGSVLRELY 515

Query: 1480 LDDCQSIDVMLILSALKKLKCLEVLSVADMETVCDDFICQLVTECGPNMKELCLANCVKL 1659
            +DDCQS+D MLIL +LKKL+ LEVLS+A ++TVCDDF+ + V  CG N+KE  LA+C KL
Sbjct: 516  IDDCQSLDAMLILPSLKKLEHLEVLSLAGIQTVCDDFVREFVVACGHNIKEFGLADCTKL 575

Query: 1660 TDISLKAIAEKCSGLCALDLTNLRKLSDFSIGHIANGCPLIEKLKLCRNTLSDEAIAAFL 1839
            TD SLK IAE C GLCAL+L NLRKL+D ++G +ANGC  I+ LKLCRN  SDE IAAFL
Sbjct: 576  TDSSLKVIAETCPGLCALNLVNLRKLTDSTLGFLANGCREIQTLKLCRNAFSDEGIAAFL 635

Query: 1840 EASGESLTELSLNNIKKVGPNTAISLARRCTRNLLTLDLSWCRNLTDEAVGYIVDGCLSL 2019
            E+SG+ L ELSLNN+KKVG +TAISLARR +RNL++LDLSWCRNL+DEAVG IVD C SL
Sbjct: 636  ESSGDLLKELSLNNVKKVGHHTAISLARR-SRNLISLDLSWCRNLSDEAVGLIVDSCSSL 694

Query: 2020 RLIKLFGCTQI 2052
            R++KLFGC Q+
Sbjct: 695  RVLKLFGCGQV 705


>ref|XP_003551123.1| PREDICTED: DNA repair protein rhp7-like [Glycine max]
          Length = 675

 Score =  522 bits (1345), Expect = e-145
 Identities = 275/511 (53%), Positives = 357/511 (69%), Gaps = 3/511 (0%)
 Frame = +1

Query: 661  HRRRGDRNRFQDVAKHSGPKFAHFHAXXXXXXINVAAPSADELPE--IEDWPGPFSTAMK 834
            +RR  +  RF+ +AK +   +A F        +     S    P+  I+D   PFS AMK
Sbjct: 181  YRRNRNMERFRVIAKRNATHYARFD----DSEVGDEGTSLYLNPQGNIDDSETPFSIAMK 236

Query: 835  IIKDRSTKLNGRQATLTQGSSKTTPVIQWMPSTDRNRNPMKPF-VPSLQDLCVSLLAKNA 1011
             IKDR+ K     A              W+P  +      + F VPSLQ+LC+ +LA NA
Sbjct: 237  AIKDRAMKKKVCDA--------------WVPKRNPQGGEKRFFLVPSLQELCLEILANNA 282

Query: 1012 EAIVSLKNVPDDLRNTLTKLLCDSRKMDSHVMDLLVAESPDVVRVKDCSWMTEEQMSKTF 1191
            +A+VSL+ VPD+LR  L+KLLCDSRKM+S  ++LL++ SP  +R+KDCSW+TEEQ +K+F
Sbjct: 283  DAMVSLEGVPDELRRKLSKLLCDSRKMNSRFLELLLSGSPTEIRIKDCSWLTEEQFAKSF 342

Query: 1192 GECDTSKLVVLQLDLCGRCLPDYVLRATLARSPKSLPCLAAVSLRGACRVTDAGLSSLVA 1371
              CDT++L VLQLD CGRC+PDY L  TL +SP+ LP L  +SL GACR++D GL  LV+
Sbjct: 343  QTCDTTRLEVLQLDQCGRCIPDYALLGTLRQSPRWLPKLITLSLSGACRLSDKGLHVLVS 402

Query: 1372 SAPCLRSINLGQCSLITSTGIDTIANSLGLLVRELYLDDCQSIDVMLILSALKKLKCLEV 1551
            SAP LRSINL QCSL++S  I+ +A+SLG L++ELYLDDC  ID   I+  LKKL+ LEV
Sbjct: 403  SAPALRSINLSQCSLLSSASINILADSLGSLLKELYLDDCLMIDAAQIVPGLKKLEHLEV 462

Query: 1552 LSVADMETVCDDFICQLVTECGPNMKELCLANCVKLTDISLKAIAEKCSGLCALDLTNLR 1731
            LS+A ++TV D+FI   +  CG NMKEL   +C KLTD S+K IAE C GLCALDL NL 
Sbjct: 463  LSLAGIQTVSDEFIKNYIIACGHNMKELIFKDCRKLTDASIKVIAEHCPGLCALDLMNLD 522

Query: 1732 KLSDFSIGHIANGCPLIEKLKLCRNTLSDEAIAAFLEASGESLTELSLNNIKKVGPNTAI 1911
            KL+D S+G++ N C  +  LKLCRN  SDEAIAAFLE +GESL ELSLNNIKKVG +T I
Sbjct: 523  KLTDLSLGYLTNSCQALRTLKLCRNLFSDEAIAAFLEITGESLKELSLNNIKKVGHHTTI 582

Query: 1912 SLARRCTRNLLTLDLSWCRNLTDEAVGYIVDGCLSLRLIKLFGCTQISNAFLEGHSNPFV 2091
            SLAR   +NL TLDLSWCRNLTD  +G+IVD C SLRL+KLFGC+ +++ FL GHSNP +
Sbjct: 583  SLARH-AKNLHTLDLSWCRNLTDNELGFIVDSCFSLRLLKLFGCSLVTDVFLNGHSNPEI 641

Query: 2092 RIVGLKTTPILEHLNVFDPLEGPLRYSSVPI 2184
            +I+GLK +P+L+++ V +P +GPLRYS V +
Sbjct: 642  QILGLKMSPLLQNVKVPEPYQGPLRYSPVSV 672


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