BLASTX nr result

ID: Coptis24_contig00007439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007439
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513632.1| chaperone binding protein, putative [Ricinus...   117   7e-25
gb|AFM35697.1| SGT1 [Vitis pseudoreticulata]                          117   1e-24
ref|XP_002276170.1| PREDICTED: protein SGT1 homolog [Vitis vinif...   117   1e-24
gb|ACF84496.1| unknown [Zea mays] gi|219886829|gb|ACL53789.1| un...   116   2e-24
ref|XP_002327509.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24

>ref|XP_002513632.1| chaperone binding protein, putative [Ricinus communis]
           gi|223547540|gb|EEF49035.1| chaperone binding protein,
           putative [Ricinus communis]
          Length = 361

 Score =  117 bits (294), Expect = 7e-25
 Identities = 54/61 (88%), Positives = 58/61 (95%)
 Frame = -1

Query: 456 AALNKFFRDIYQGSDDDIRRAMSKSFVESNGTVLSTNWKEVGAKKVEGSPPDGMEMKKWE 277
           AALNKFFRDIYQ +D+D RRAM KSFVESNGTVLSTNWKEVG+KKVEGSPPDGMEM+KWE
Sbjct: 301 AALNKFFRDIYQDADEDTRRAMKKSFVESNGTVLSTNWKEVGSKKVEGSPPDGMEMRKWE 360

Query: 276 Y 274
           Y
Sbjct: 361 Y 361


>gb|AFM35697.1| SGT1 [Vitis pseudoreticulata]
          Length = 361

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/61 (88%), Positives = 58/61 (95%)
 Frame = -1

Query: 456 AALNKFFRDIYQGSDDDIRRAMSKSFVESNGTVLSTNWKEVGAKKVEGSPPDGMEMKKWE 277
           AALNKFFRDIY+ +D+D RRAM KSFVESNGTVLSTNWKEVG+KKVEGSPPDGMEMKKWE
Sbjct: 301 AALNKFFRDIYKDADEDTRRAMQKSFVESNGTVLSTNWKEVGSKKVEGSPPDGMEMKKWE 360

Query: 276 Y 274
           Y
Sbjct: 361 Y 361


>ref|XP_002276170.1| PREDICTED: protein SGT1 homolog [Vitis vinifera]
           gi|302143763|emb|CBI22624.3| unnamed protein product
           [Vitis vinifera]
          Length = 361

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/61 (88%), Positives = 58/61 (95%)
 Frame = -1

Query: 456 AALNKFFRDIYQGSDDDIRRAMSKSFVESNGTVLSTNWKEVGAKKVEGSPPDGMEMKKWE 277
           AALNKFFRDIY+ +D+D RRAM KSFVESNGTVLSTNWKEVG+KKVEGSPPDGMEMKKWE
Sbjct: 301 AALNKFFRDIYKDADEDTRRAMQKSFVESNGTVLSTNWKEVGSKKVEGSPPDGMEMKKWE 360

Query: 276 Y 274
           Y
Sbjct: 361 Y 361


>gb|ACF84496.1| unknown [Zea mays] gi|219886829|gb|ACL53789.1| unknown [Zea mays]
           gi|414881368|tpg|DAA58499.1| TPA: suppressor of G2
           allele of SKP1 [Zea mays]
          Length = 361

 Score =  116 bits (291), Expect = 2e-24
 Identities = 53/61 (86%), Positives = 59/61 (96%)
 Frame = -1

Query: 456 AALNKFFRDIYQGSDDDIRRAMSKSFVESNGTVLSTNWKEVGAKKVEGSPPDGMEMKKWE 277
           AALNKFFRDIY+ +D+D+RRAM KSFVESNGTVLSTNWK+VGAKKVEGSPPDGME+KKWE
Sbjct: 301 AALNKFFRDIYKDADEDMRRAMMKSFVESNGTVLSTNWKDVGAKKVEGSPPDGMELKKWE 360

Query: 276 Y 274
           Y
Sbjct: 361 Y 361


>ref|XP_002327509.1| predicted protein [Populus trichocarpa] gi|222836063|gb|EEE74484.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/61 (86%), Positives = 57/61 (93%)
 Frame = -1

Query: 456 AALNKFFRDIYQGSDDDIRRAMSKSFVESNGTVLSTNWKEVGAKKVEGSPPDGMEMKKWE 277
           AALNKFFR+IYQ +D+D RRAM KSFVESNGTVLSTNWKEVG KKVEGSPPDGMEM+KWE
Sbjct: 299 AALNKFFREIYQDADEDTRRAMKKSFVESNGTVLSTNWKEVGTKKVEGSPPDGMEMRKWE 358

Query: 276 Y 274
           Y
Sbjct: 359 Y 359


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