BLASTX nr result
ID: Coptis24_contig00007429
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00007429 (919 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycin... 235 1e-59 ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycin... 234 2e-59 ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 233 6e-59 ref|XP_002886339.1| ribosomal protein S6 family protein [Arabido... 223 4e-56 gb|AAF19690.1|AC009519_24 F1N19.8 [Arabidopsis thaliana] 223 5e-56 >ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycine max] gi|255625673|gb|ACU13181.1| unknown [Glycine max] Length = 214 Score = 235 bits (599), Expect = 1e-59 Identities = 118/161 (73%), Positives = 126/161 (78%) Frame = -3 Query: 710 PGYQSNGFSVRALTLDXXXXXXXXXXXXEDPVSPPGGSNVALAEEKEEPQCPPGLRQYET 531 P +GFS+RA TLD ED S PGG EEKEEPQCPPGLRQYET Sbjct: 54 PKRNDHGFSIRAQTLDFSDSFFEGGFGSEDDPSSPGGPGFTGVEEKEEPQCPPGLRQYET 113 Query: 530 MAVLRPDMSEDERLTLTQKYEEIIIAGGGMYVEIFNRGVIPLAYGIKKKNKAGESNTYLD 351 M VLRPDMSEDERL LTQKYEE+++AGGGMYVE+FNRGVIPLAY IKKKNKAGE+NTYLD Sbjct: 114 MMVLRPDMSEDERLALTQKYEEVLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLD 173 Query: 350 GIYLLFTYFTKPESIVPLEARLKTDDNVIRSSSFKIRKRKY 228 GIYLLFTYFTKPESI PLE + TDDNVIRS S KIRKRKY Sbjct: 174 GIYLLFTYFTKPESITPLEETMLTDDNVIRSMSSKIRKRKY 214 >ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycine max] gi|255628961|gb|ACU14825.1| unknown [Glycine max] Length = 214 Score = 234 bits (598), Expect = 2e-59 Identities = 118/161 (73%), Positives = 125/161 (77%) Frame = -3 Query: 710 PGYQSNGFSVRALTLDXXXXXXXXXXXXEDPVSPPGGSNVALAEEKEEPQCPPGLRQYET 531 P GFS+RA TLD ED S PGG EEKEEPQCPPGLRQYET Sbjct: 54 PKRNDYGFSIRAQTLDFSDSFFEGGFGSEDVPSSPGGPGFTAVEEKEEPQCPPGLRQYET 113 Query: 530 MAVLRPDMSEDERLTLTQKYEEIIIAGGGMYVEIFNRGVIPLAYGIKKKNKAGESNTYLD 351 M VLRPDMSEDERL LTQKYEE+++AGGGMYVE+FNRGVIPLAY IKKKNKAGE+NTYLD Sbjct: 114 MMVLRPDMSEDERLALTQKYEEVLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLD 173 Query: 350 GIYLLFTYFTKPESIVPLEARLKTDDNVIRSSSFKIRKRKY 228 GIYLLFTYFTKPESI PLE + TDDNVIRS S KIRKRKY Sbjct: 174 GIYLLFTYFTKPESITPLEETMLTDDNVIRSMSSKIRKRKY 214 >ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic [Vitis vinifera] Length = 199 Score = 233 bits (593), Expect = 6e-59 Identities = 115/155 (74%), Positives = 127/155 (81%) Frame = -3 Query: 692 GFSVRALTLDXXXXXXXXXXXXEDPVSPPGGSNVALAEEKEEPQCPPGLRQYETMAVLRP 513 G S+RALTLD +D + P G +A E+K+EPQCPPGLRQYETMAVLRP Sbjct: 45 GLSIRALTLDFSGSFFEGGFGSDDDPNSPPGPGIAAVEDKDEPQCPPGLRQYETMAVLRP 104 Query: 512 DMSEDERLTLTQKYEEIIIAGGGMYVEIFNRGVIPLAYGIKKKNKAGESNTYLDGIYLLF 333 DMSEDERL LTQKYEE+++AGGGMYVE+FNRGVIPLAY IKKKNKAGESNTYLDGIYLLF Sbjct: 105 DMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGESNTYLDGIYLLF 164 Query: 332 TYFTKPESIVPLEARLKTDDNVIRSSSFKIRKRKY 228 TYFTKPES+ LEA L DD+VIRSSSFKIRKRKY Sbjct: 165 TYFTKPESMEVLEATLTADDDVIRSSSFKIRKRKY 199 >ref|XP_002886339.1| ribosomal protein S6 family protein [Arabidopsis lyrata subsp. lyrata] gi|297332180|gb|EFH62598.1| ribosomal protein S6 family protein [Arabidopsis lyrata subsp. lyrata] Length = 211 Score = 223 bits (569), Expect = 4e-56 Identities = 106/132 (80%), Positives = 116/132 (87%) Frame = -3 Query: 623 DPVSPPGGSNVALAEEKEEPQCPPGLRQYETMAVLRPDMSEDERLTLTQKYEEIIIAGGG 444 DP SPPG E+K EPQCPPGLRQYETMAVLRPDMSEDERL LTQKYEE+++AGGG Sbjct: 79 DPTSPPGSGVSTALEDKPEPQCPPGLRQYETMAVLRPDMSEDERLGLTQKYEELLVAGGG 138 Query: 443 MYVEIFNRGVIPLAYGIKKKNKAGESNTYLDGIYLLFTYFTKPESIVPLEARLKTDDNVI 264 MYVE+FNRGVIPLAY I+KKNKAGE+NTYLDGIYLLFTYFTKPESI PLE L DD++I Sbjct: 139 MYVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTKPESITPLETVLTADDDII 198 Query: 263 RSSSFKIRKRKY 228 RSSSFKI+KRKY Sbjct: 199 RSSSFKIKKRKY 210 >gb|AAF19690.1|AC009519_24 F1N19.8 [Arabidopsis thaliana] Length = 231 Score = 223 bits (568), Expect = 5e-56 Identities = 114/165 (69%), Positives = 131/165 (79%), Gaps = 1/165 (0%) Frame = -3 Query: 719 QRKPGYQSNGFSVRALTLDXXXXXXXXXXXXEDPVSPPGGSNVALA-EEKEEPQCPPGLR 543 Q++ G Q F V++ LD +D + P GS V+ A E+K EPQCPPGLR Sbjct: 69 QKRDGSQ---FVVKSQALDFSGTFFEGGFGSDDDPTSPSGSGVSTALEDKPEPQCPPGLR 125 Query: 542 QYETMAVLRPDMSEDERLTLTQKYEEIIIAGGGMYVEIFNRGVIPLAYGIKKKNKAGESN 363 QYETMAVLRPDMSEDERL LTQKYEE+++AGGGMYVE+FNRGVIPLAY I+KKNKAGE+N Sbjct: 126 QYETMAVLRPDMSEDERLGLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKKNKAGETN 185 Query: 362 TYLDGIYLLFTYFTKPESIVPLEARLKTDDNVIRSSSFKIRKRKY 228 TYLDGIYLLFTYFTKPESIVPLE L DD++IRSSSFKI+KRKY Sbjct: 186 TYLDGIYLLFTYFTKPESIVPLETVLTADDDIIRSSSFKIKKRKY 230