BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007429
         (919 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycin...   235   1e-59
ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycin...   234   2e-59
ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, c...   233   6e-59
ref|XP_002886339.1| ribosomal protein S6 family protein [Arabido...   223   4e-56
gb|AAF19690.1|AC009519_24 F1N19.8 [Arabidopsis thaliana]              223   5e-56

>ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycine max]
           gi|255625673|gb|ACU13181.1| unknown [Glycine max]
          Length = 214

 Score =  235 bits (599), Expect = 1e-59
 Identities = 118/161 (73%), Positives = 126/161 (78%)
 Frame = -3

Query: 710 PGYQSNGFSVRALTLDXXXXXXXXXXXXEDPVSPPGGSNVALAEEKEEPQCPPGLRQYET 531
           P    +GFS+RA TLD            ED  S PGG      EEKEEPQCPPGLRQYET
Sbjct: 54  PKRNDHGFSIRAQTLDFSDSFFEGGFGSEDDPSSPGGPGFTGVEEKEEPQCPPGLRQYET 113

Query: 530 MAVLRPDMSEDERLTLTQKYEEIIIAGGGMYVEIFNRGVIPLAYGIKKKNKAGESNTYLD 351
           M VLRPDMSEDERL LTQKYEE+++AGGGMYVE+FNRGVIPLAY IKKKNKAGE+NTYLD
Sbjct: 114 MMVLRPDMSEDERLALTQKYEEVLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLD 173

Query: 350 GIYLLFTYFTKPESIVPLEARLKTDDNVIRSSSFKIRKRKY 228
           GIYLLFTYFTKPESI PLE  + TDDNVIRS S KIRKRKY
Sbjct: 174 GIYLLFTYFTKPESITPLEETMLTDDNVIRSMSSKIRKRKY 214


>ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycine max]
           gi|255628961|gb|ACU14825.1| unknown [Glycine max]
          Length = 214

 Score =  234 bits (598), Expect = 2e-59
 Identities = 118/161 (73%), Positives = 125/161 (77%)
 Frame = -3

Query: 710 PGYQSNGFSVRALTLDXXXXXXXXXXXXEDPVSPPGGSNVALAEEKEEPQCPPGLRQYET 531
           P     GFS+RA TLD            ED  S PGG      EEKEEPQCPPGLRQYET
Sbjct: 54  PKRNDYGFSIRAQTLDFSDSFFEGGFGSEDVPSSPGGPGFTAVEEKEEPQCPPGLRQYET 113

Query: 530 MAVLRPDMSEDERLTLTQKYEEIIIAGGGMYVEIFNRGVIPLAYGIKKKNKAGESNTYLD 351
           M VLRPDMSEDERL LTQKYEE+++AGGGMYVE+FNRGVIPLAY IKKKNKAGE+NTYLD
Sbjct: 114 MMVLRPDMSEDERLALTQKYEEVLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLD 173

Query: 350 GIYLLFTYFTKPESIVPLEARLKTDDNVIRSSSFKIRKRKY 228
           GIYLLFTYFTKPESI PLE  + TDDNVIRS S KIRKRKY
Sbjct: 174 GIYLLFTYFTKPESITPLEETMLTDDNVIRSMSSKIRKRKY 214


>ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic [Vitis
           vinifera]
          Length = 199

 Score =  233 bits (593), Expect = 6e-59
 Identities = 115/155 (74%), Positives = 127/155 (81%)
 Frame = -3

Query: 692 GFSVRALTLDXXXXXXXXXXXXEDPVSPPGGSNVALAEEKEEPQCPPGLRQYETMAVLRP 513
           G S+RALTLD            +D  + P G  +A  E+K+EPQCPPGLRQYETMAVLRP
Sbjct: 45  GLSIRALTLDFSGSFFEGGFGSDDDPNSPPGPGIAAVEDKDEPQCPPGLRQYETMAVLRP 104

Query: 512 DMSEDERLTLTQKYEEIIIAGGGMYVEIFNRGVIPLAYGIKKKNKAGESNTYLDGIYLLF 333
           DMSEDERL LTQKYEE+++AGGGMYVE+FNRGVIPLAY IKKKNKAGESNTYLDGIYLLF
Sbjct: 105 DMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGESNTYLDGIYLLF 164

Query: 332 TYFTKPESIVPLEARLKTDDNVIRSSSFKIRKRKY 228
           TYFTKPES+  LEA L  DD+VIRSSSFKIRKRKY
Sbjct: 165 TYFTKPESMEVLEATLTADDDVIRSSSFKIRKRKY 199


>ref|XP_002886339.1| ribosomal protein S6 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297332180|gb|EFH62598.1| ribosomal protein S6
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 211

 Score =  223 bits (569), Expect = 4e-56
 Identities = 106/132 (80%), Positives = 116/132 (87%)
 Frame = -3

Query: 623 DPVSPPGGSNVALAEEKEEPQCPPGLRQYETMAVLRPDMSEDERLTLTQKYEEIIIAGGG 444
           DP SPPG       E+K EPQCPPGLRQYETMAVLRPDMSEDERL LTQKYEE+++AGGG
Sbjct: 79  DPTSPPGSGVSTALEDKPEPQCPPGLRQYETMAVLRPDMSEDERLGLTQKYEELLVAGGG 138

Query: 443 MYVEIFNRGVIPLAYGIKKKNKAGESNTYLDGIYLLFTYFTKPESIVPLEARLKTDDNVI 264
           MYVE+FNRGVIPLAY I+KKNKAGE+NTYLDGIYLLFTYFTKPESI PLE  L  DD++I
Sbjct: 139 MYVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTKPESITPLETVLTADDDII 198

Query: 263 RSSSFKIRKRKY 228
           RSSSFKI+KRKY
Sbjct: 199 RSSSFKIKKRKY 210


>gb|AAF19690.1|AC009519_24 F1N19.8 [Arabidopsis thaliana]
          Length = 231

 Score =  223 bits (568), Expect = 5e-56
 Identities = 114/165 (69%), Positives = 131/165 (79%), Gaps = 1/165 (0%)
 Frame = -3

Query: 719 QRKPGYQSNGFSVRALTLDXXXXXXXXXXXXEDPVSPPGGSNVALA-EEKEEPQCPPGLR 543
           Q++ G Q   F V++  LD            +D  + P GS V+ A E+K EPQCPPGLR
Sbjct: 69  QKRDGSQ---FVVKSQALDFSGTFFEGGFGSDDDPTSPSGSGVSTALEDKPEPQCPPGLR 125

Query: 542 QYETMAVLRPDMSEDERLTLTQKYEEIIIAGGGMYVEIFNRGVIPLAYGIKKKNKAGESN 363
           QYETMAVLRPDMSEDERL LTQKYEE+++AGGGMYVE+FNRGVIPLAY I+KKNKAGE+N
Sbjct: 126 QYETMAVLRPDMSEDERLGLTQKYEELLVAGGGMYVEVFNRGVIPLAYSIRKKNKAGETN 185

Query: 362 TYLDGIYLLFTYFTKPESIVPLEARLKTDDNVIRSSSFKIRKRKY 228
           TYLDGIYLLFTYFTKPESIVPLE  L  DD++IRSSSFKI+KRKY
Sbjct: 186 TYLDGIYLLFTYFTKPESIVPLETVLTADDDIIRSSSFKIKKRKY 230