BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007426
         (969 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271632.1| PREDICTED: 40S ribosomal protein S6 isoform ...   385   e-105
ref|XP_002273865.1| PREDICTED: 40S ribosomal protein S6 isoform ...   383   e-104
ref|XP_002285752.1| PREDICTED: 40S ribosomal protein S6 [Vitis v...   381   e-103
ref|XP_002309965.1| predicted protein [Populus trichocarpa] gi|2...   381   e-103
gb|ACF06626.1| S6 ribosomal protein [Elaeis guineensis]               380   e-103

>ref|XP_002271632.1| PREDICTED: 40S ribosomal protein S6 isoform 1 [Vitis vinifera]
           gi|296087487|emb|CBI34076.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  385 bits (989), Expect = e-105
 Identities = 199/249 (79%), Positives = 205/249 (82%)
 Frame = +1

Query: 13  MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFRGYVFKIMGGCDKQG 192
           MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEV+GDALGEEF+GYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVNGDALGEEFKGYVFKIMGGCDKQG 60

Query: 193 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVLNLVIVKKGE 372
           FPMKQGVLTPGRV LLLHRGTPCF                 CIVSQDLSVLNLVIVKKGE
Sbjct: 61  FPMKQGVLTPGRVSLLLHRGTPCFRGYGRRNGERRRKAVRGCIVSQDLSVLNLVIVKKGE 120

Query: 373 SDLPGLTDIEMPRMRGPKRAPKIRRLFNLSKEDDVRKYVNTYRRTFTNKAGKKCSKAPKI 552
           SDLPGLTD E PRMRGPKRA KIR+LFNLSKEDDVRKYVNTYRRTFT K+GKKCSKAPKI
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKCSKAPKI 180

Query: 553 QRLVTPLTLQRXXXXXXXXXXXXXXXXXXXXXYQKLLNTRLKEQRERRSESIAKKRSRLS 732
           QRLVTPLTLQR                     YQKLL TRLKEQRERRSES+AK+RSRLS
Sbjct: 181 QRLVTPLTLQRKRARIAEKKKRIAKAKSEAAEYQKLLATRLKEQRERRSESLAKRRSRLS 240

Query: 733 AASKPSVAA 759
           AASKPSVAA
Sbjct: 241 AASKPSVAA 249


>ref|XP_002273865.1| PREDICTED: 40S ribosomal protein S6 isoform 1 [Vitis vinifera]
           gi|297741825|emb|CBI33138.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  383 bits (984), Expect = e-104
 Identities = 196/249 (78%), Positives = 205/249 (82%)
 Frame = +1

Query: 13  MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFRGYVFKIMGGCDKQG 192
           MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGDALGEEF+GYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 193 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVLNLVIVKKGE 372
           FPMKQGVLTPGRV+LLLHRGTPCF                 CIVSQDLSVLNLVIVKKGE
Sbjct: 61  FPMKQGVLTPGRVQLLLHRGTPCFRGYGRRNGERRRKAVRGCIVSQDLSVLNLVIVKKGE 120

Query: 373 SDLPGLTDIEMPRMRGPKRAPKIRRLFNLSKEDDVRKYVNTYRRTFTNKAGKKCSKAPKI 552
            +LPGLTD+E PRMRGPKRA KIR+LFNLSKEDDVRKYVNTYRRTFT K+GKKCSKAPKI
Sbjct: 121 GELPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKCSKAPKI 180

Query: 553 QRLVTPLTLQRXXXXXXXXXXXXXXXXXXXXXYQKLLNTRLKEQRERRSESIAKKRSRLS 732
           QRLVTPLTLQR                     YQKLL TRLKEQRERRSES+AKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARIAEKKKRIAKAKSEAAEYQKLLATRLKEQRERRSESLAKKRSRLS 240

Query: 733 AASKPSVAA 759
           AASKPS+ A
Sbjct: 241 AASKPSIVA 249


>ref|XP_002285752.1| PREDICTED: 40S ribosomal protein S6 [Vitis vinifera]
           gi|302141988|emb|CBI19191.3| unnamed protein product
           [Vitis vinifera]
          Length = 249

 Score =  381 bits (979), Expect = e-103
 Identities = 197/249 (79%), Positives = 204/249 (81%)
 Frame = +1

Query: 13  MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFRGYVFKIMGGCDKQG 192
           MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGDALGEEF GYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFNGYVFKIMGGCDKQG 60

Query: 193 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVLNLVIVKKGE 372
           FPMKQGVLTPGRV LLLHRGTPCF                 CIVSQDLSVLNLVIVKKGE
Sbjct: 61  FPMKQGVLTPGRVSLLLHRGTPCFRGYGRRNGERRRKAVRGCIVSQDLSVLNLVIVKKGE 120

Query: 373 SDLPGLTDIEMPRMRGPKRAPKIRRLFNLSKEDDVRKYVNTYRRTFTNKAGKKCSKAPKI 552
           SDLPGLTD E PRMRGPKRA KIR+LFNLSK+DDVRKYVNTYRR+FT K+GKKCSKAPKI
Sbjct: 121 SDLPGLTDTEKPRMRGPKRASKIRKLFNLSKDDDVRKYVNTYRRSFTTKSGKKCSKAPKI 180

Query: 553 QRLVTPLTLQRXXXXXXXXXXXXXXXXXXXXXYQKLLNTRLKEQRERRSESIAKKRSRLS 732
           QRLVTPLTLQR                     YQKLL TRLKEQRERRSES+AK+RSRLS
Sbjct: 181 QRLVTPLTLQRKRARIAEKKKRIAKAKSEAAEYQKLLATRLKEQRERRSESLAKRRSRLS 240

Query: 733 AASKPSVAA 759
           AASKPSVAA
Sbjct: 241 AASKPSVAA 249


>ref|XP_002309965.1| predicted protein [Populus trichocarpa] gi|222852868|gb|EEE90415.1|
           predicted protein [Populus trichocarpa]
          Length = 249

 Score =  381 bits (978), Expect = e-103
 Identities = 197/249 (79%), Positives = 203/249 (81%)
 Frame = +1

Query: 13  MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFRGYVFKIMGGCDKQG 192
           MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGDALGEEF GYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFNGYVFKIMGGCDKQG 60

Query: 193 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVLNLVIVKKGE 372
           FPMKQGVLTPGRVRLLLHRGTPCF                 CIVSQDLSVLNLVIVKKGE
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGE 120

Query: 373 SDLPGLTDIEMPRMRGPKRAPKIRRLFNLSKEDDVRKYVNTYRRTFTNKAGKKCSKAPKI 552
           +DLPGLTD+E PRMRGPKRA KIR+LFNLSKEDDVRKYVNTYRRTFT K+GKK SKAPKI
Sbjct: 121 NDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKI 180

Query: 553 QRLVTPLTLQRXXXXXXXXXXXXXXXXXXXXXYQKLLNTRLKEQRERRSESIAKKRSRLS 732
           QRLVTPLTLQR                     YQKLL TRLKEQRERRSES+AKKRSRLS
Sbjct: 181 QRLVTPLTLQRKRARISDKKKRITKAKAEAAEYQKLLATRLKEQRERRSESLAKKRSRLS 240

Query: 733 AASKPSVAA 759
            ASKPSV A
Sbjct: 241 VASKPSVVA 249


>gb|ACF06626.1| S6 ribosomal protein [Elaeis guineensis]
          Length = 249

 Score =  380 bits (977), Expect = e-103
 Identities = 197/249 (79%), Positives = 205/249 (82%)
 Frame = +1

Query: 13  MKFNIANPTTGCQKKLEIDDDQKLRAFYDKRISQEVSGDALGEEFRGYVFKIMGGCDKQG 192
           MKFNIANPTTGCQKKLEIDDDQKLRAF+DKRISQEVSGDALGEEF+GYVFKIMGGCDKQG
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQG 60

Query: 193 FPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSQDLSVLNLVIVKKGE 372
           FPMKQGVLTPGRVRLLLHRGTPCF                 CIVS DLSVLNLVIVKKGE
Sbjct: 61  FPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGE 120

Query: 373 SDLPGLTDIEMPRMRGPKRAPKIRRLFNLSKEDDVRKYVNTYRRTFTNKAGKKCSKAPKI 552
           +DLPGLTDIE PRMRGPKRA KIR+LFNLSKEDDVRKYVNTYRRTFT K+GKKCSKAPKI
Sbjct: 121 NDLPGLTDIEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKCSKAPKI 180

Query: 553 QRLVTPLTLQRXXXXXXXXXXXXXXXXXXXXXYQKLLNTRLKEQRERRSESIAKKRSRLS 732
           QRLVTPLTLQR                     YQKLL TRLKEQRERRSES+AK+RS+LS
Sbjct: 181 QRLVTPLTLQRKRARIAEKKKRIAKAKAEAAEYQKLLATRLKEQRERRSESLAKRRSKLS 240

Query: 733 AASKPSVAA 759
           AASK SVAA
Sbjct: 241 AASKLSVAA 249