BLASTX nr result

ID: Coptis24_contig00007416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007416
         (953 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22103.3| unnamed protein product [Vitis vinifera]              204   3e-50
ref|XP_002300875.1| predicted protein [Populus trichocarpa] gi|2...   183   6e-44
gb|ABK96557.1| unknown [Populus trichocarpa x Populus deltoides]      179   7e-43
dbj|BAK02178.1| predicted protein [Hordeum vulgare subsp. vulgare]    132   9e-29
emb|CAN71458.1| hypothetical protein VITISV_007604 [Vitis vinifera]   128   2e-27

>emb|CBI22103.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  204 bits (519), Expect = 3e-50
 Identities = 113/278 (40%), Positives = 164/278 (58%), Gaps = 30/278 (10%)
 Frame = -2

Query: 937 NESLTFDQMSKCFNMPIADAAANLGVCSSLLKKLCRDNGLVRWPYRKFLAGKTIEEIQKD 758
           ++SL+FD +S CF++PI++AA  LGVC+S+LKK+CR+NGL RWPYRKF +G ++EEI+K 
Sbjct: 10  DKSLSFDDVSNCFSLPISEAANALGVCTSVLKKICRENGLQRWPYRKFQSGTSVEEIKKY 69

Query: 757 AAREKKREMIELARAARQKDXXXXXXXXXXT--------------------------IFQ 656
           AARE+ +E+ +L++   Q +                                     + Q
Sbjct: 70  AARERNKELAQLSKVDVQGNDALTSSAVSAAFGSQPQNDTKSSLWKMSKLHGAIPPHMLQ 129

Query: 655 HQGNSVSQDGLTNDTPHASLLRNIAC-LDEFKQGFPTTGLATVTMRWWGGRGSDGNEDEI 479
            QG+   Q+G   + P+ASL + IA  LDEFK GFPT+GLAT + +WWG    DG E  I
Sbjct: 130 QQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASNKWWGSSSPDGYEGTI 189

Query: 478 FGEEPAVDEVSKQQPHDLADNDVEFLE---EETDPLAKKIDMGPQGAALLSSVRKAATAE 308
            G    +DE  K+Q   LADN    L    E+ +   ++  +GPQG  LL++VRK    E
Sbjct: 190 -GNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQGTGLLTAVRKTTVEE 248

Query: 307 GREALKLGVFGDHGLFKPDRQEKLMLLKVFKSSMSCQW 194
           GR+ LK+GV  DHG+ K  ++E+ +LL++F SS+  QW
Sbjct: 249 GRKILKIGVGRDHGVLKAGKKERRLLLQIFGSSLPSQW 286


>ref|XP_002300875.1| predicted protein [Populus trichocarpa] gi|222842601|gb|EEE80148.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  183 bits (464), Expect = 6e-44
 Identities = 108/255 (42%), Positives = 154/255 (60%), Gaps = 6/255 (2%)
 Frame = -2

Query: 940 PNESL--TFDQMSKCFNMPIADAAANLGVCSSLLKKLCRDNGLVRWPYRKFLAGKTIEEI 767
           PN+S   +++ +SK F++P++DAA NLGVC S+LKK+CRDNGL RWPYRK+LAGK+IE+I
Sbjct: 9   PNQSKPPSWEAISKHFSLPLSDAANNLGVCVSVLKKICRDNGLDRWPYRKYLAGKSIEDI 68

Query: 766 QKDAAREKKREMIELARAARQKD-XXXXXXXXXXTIFQHQGNSVSQDGLTNDTPHASLLR 590
           ++ AAREK + + +LA+AA +                Q QG      G  + T    L +
Sbjct: 69  RRYAAREKIKAIADLAKAANKSGIQQQNNENSKPHKLQQQGTKDVLVGRQHITLTPGLAK 128

Query: 589 NIACLDEFKQGFPTTGLATVTMRWWGGRGSDGNE-DEIFGEEPAVDEVSKQQPHDLADND 413
            +  LDEFK GFP+ GL+T T +WWG   SD     +  G E   D+  + +    A   
Sbjct: 129 GLMGLDEFKYGFPSDGLSTATNKWWGSSLSDTQRATDRAGIETDEDDGRQSEEKVDAGTS 188

Query: 412 VEFLEEETDPLAK--KIDMGPQGAALLSSVRKAATAEGREALKLGVFGDHGLFKPDRQEK 239
           V  ++EE     K    ++ PQG  LL+SVRK A  EGREALKLGV+  +G+ K  R+++
Sbjct: 189 VVIVDEEKGENGKMESNEIDPQGTGLLTSVRKRAAEEGREALKLGVYRTYGVNKLGRKQR 248

Query: 238 LMLLKVFKSSMSCQW 194
            +LL++F SS+  QW
Sbjct: 249 ALLLRIFGSSLPKQW 263


>gb|ABK96557.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 274

 Score =  179 bits (455), Expect = 7e-43
 Identities = 109/264 (41%), Positives = 156/264 (59%), Gaps = 6/264 (2%)
 Frame = -2

Query: 940 PNESL--TFDQMSKCFNMPIADAAANLGVCSSLLKKLCRDNGLVRWPYRKFLAGKTIEEI 767
           PN+S   +++ +SK F++P++DAA NLGVC S+LKK+CR+NGL RWPYRK+LAGK+IE+I
Sbjct: 9   PNQSKPPSWEAISKHFSLPLSDAANNLGVCVSVLKKICRENGLDRWPYRKYLAGKSIEDI 68

Query: 766 QKDAAREKKREMIELARAARQKD-XXXXXXXXXXTIFQHQGNSVSQDGLTNDTPHASLLR 590
           ++ AAREK + + +LA+AA +                Q QG      G  +      L +
Sbjct: 69  RRYAAREKIKAIADLAKAANKSGIQQQNNENSKPHKLQQQGTKDVLVGRQHIMLTPGLAK 128

Query: 589 NIACLDEFKQGFPTTGLATVTMRWWGGRGSDGNE-DEIFGEEPAVDEVSKQQPHDLADND 413
            +  LDEFK GFP+ GL+T T +WWG   SD     +  G E   D+  + +    A   
Sbjct: 129 GLMGLDEFKYGFPSDGLSTATNKWWGSSLSDTQRATDRAGIETDEDDGHQSEEKVDAGTS 188

Query: 412 VEFLEEETDPLAK--KIDMGPQGAALLSSVRKAATAEGREALKLGVFGDHGLFKPDRQEK 239
           V  ++EE     K    ++ PQG  LL+SVRK A  EGREALKLGV+  +G+ K  R+++
Sbjct: 189 VVIVDEEKGENGKMESNEIDPQGTGLLTSVRKRAVEEGREALKLGVYRTYGVNKLGRKQR 248

Query: 238 LMLLKVFKSSMSCQWKFDSF*TRV 167
            +LL++F SS+  QW  D    RV
Sbjct: 249 ALLLRIFGSSLPKQWIQDFSSNRV 272


>dbj|BAK02178.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score =  132 bits (333), Expect = 9e-29
 Identities = 81/268 (30%), Positives = 153/268 (57%), Gaps = 17/268 (6%)
 Frame = -2

Query: 943 PPNESLTFDQMSKCFNMPIADAAANLGVCSSLLKKLCRDNGLVRWPYRKFLAGKTIEEIQ 764
           P   SL+++++SK F++PIA+AA+ LGVC+S+LK++CR +G+VRWPYRK ++GK   +  
Sbjct: 81  PTRVSLSYEEISKLFSLPIAEAASILGVCTSVLKRICRTHGIVRWPYRKIVSGK--GDDV 138

Query: 763 KDAAREKKREMIELARAARQKD-XXXXXXXXXXTIFQ----------HQGNSVSQDGLTN 617
           K+A REK  +++EL++ A+QK              FQ            G+++ +  + +
Sbjct: 139 KNAEREKAMQLLELSKIAKQKAISSSGSLTTSSGAFQAVSKAQQGSAKAGSAIGRQNVPS 198

Query: 616 DTPHASLLRNIACLDEFKQGFPTTGLATVTMRWWGGRGSDGNEDEIFGEEPAVD--EVSK 443
            +  +        +D+FK GFP++GL+T TM+WW    +D + + +  ++   +  E + 
Sbjct: 199 LSQFSQAKDIPTYMDDFKYGFPSSGLSTETMKWW---ATDSHTETVAVKDDNREGSESTN 255

Query: 442 QQPHDLADNDVEFLEEETDPLAKKIDMGPQGAALLSSVRKAATAEGREALKLGVFGDHG- 266
           +    + D+++++  +E +  A  +D     +A L S+R+ A  +GR  L     GD G 
Sbjct: 256 EASKGMTDDELDWGADEPEADADGMDAATDPSAQLCSLRRKAAGDGRRLLN----GDTGR 311

Query: 265 ---LFKPDRQEKLMLLKVFKSSMSCQWK 191
              L + ++++K++L +VF +S+  QW+
Sbjct: 312 VQQLCRLNKRQKIVLAQVFGASLPEQWR 339


>emb|CAN71458.1| hypothetical protein VITISV_007604 [Vitis vinifera]
          Length = 302

 Score =  128 bits (321), Expect = 2e-27
 Identities = 70/161 (43%), Positives = 98/161 (60%), Gaps = 4/161 (2%)
 Frame = -2

Query: 664 IFQHQGNSVSQDGLTNDTPHASLLRNIAC-LDEFKQGFPTTGLATVTMRWWGGRGSDGNE 488
           + Q QG+   Q+G   + P+ASL + IA  LDEFK GFPT+GLAT + +WWG    DG E
Sbjct: 138 MLQQQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASNKWWGSSSPDGYE 197

Query: 487 DEIFGEEPAVDEVSKQQPHDLADNDVEFLE---EETDPLAKKIDMGPQGAALLSSVRKAA 317
             I G    +DE  K+Q   LADN    L    E+ +   ++  +GPQG  LL++VRK  
Sbjct: 198 GTI-GNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQGTGLLTAVRKTT 256

Query: 316 TAEGREALKLGVFGDHGLFKPDRQEKLMLLKVFKSSMSCQW 194
             EGR+ LK+GV  DHG+ K  ++E+ +LL++F SS+  QW
Sbjct: 257 VEEGRKILKIGVGRDHGVLKAGKKERRLLLQIFGSSLPSQW 297


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