BLASTX nr result

ID: Coptis24_contig00007412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007412
         (980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAQ58595.1| unknown protein [Vitis vinifera]                      217   4e-54
ref|XP_003617467.1| hypothetical protein MTR_5g091900 [Medicago ...   216   5e-54
ref|XP_002305896.1| predicted protein [Populus trichocarpa] gi|2...   211   2e-52
ref|XP_002528501.1| conserved hypothetical protein [Ricinus comm...   208   2e-51
emb|CAQ58602.1| unknown gene [Vitis vinifera]                         204   2e-50

>emb|CAQ58595.1| unknown protein [Vitis vinifera]
          Length = 220

 Score =  217 bits (552), Expect = 4e-54
 Identities = 113/189 (59%), Positives = 138/189 (73%)
 Frame = +2

Query: 200 SLYGVLERIFRAILSPEDDEKATSLFVRIKKSFYQNLPLIPEASRNSTRNLLIWTRQGSA 379
           +LY VL R+  AI  P D   + SL  R+K S   N+PL+ +AS+N+ RN++ WTR+GSA
Sbjct: 24  TLYHVLHRLMAAIFFP-DPTSSASLLRRVKISVADNVPLLRQASKNTARNVMHWTRRGSA 82

Query: 380 LRALLVISIGTIVLLALSGLLVFMVFFVAATVNXXXXXXXXXXXXXGGCLAIFFTCMTAI 559
           LRALL IS+GTI LLAL+GLLVFM+FF+AAT N             GG LA+FF C+TAI
Sbjct: 83  LRALLAISVGTITLLALTGLLVFMLFFLAATFNAIVISLLMSLAAAGGFLALFFACITAI 142

Query: 560 YIGALSVAVFVISSATITTIFAVLIATGWIGFFWTVWIATKKGMSLAKHSLSMTGSALSA 739
           YIGALSVAV VIS+ATI+ I AVLI TGWIGFFWTVW+ TKK    AKHSL MTGSA++A
Sbjct: 143 YIGALSVAVVVISTATISAIIAVLITTGWIGFFWTVWLVTKKSAGFAKHSLGMTGSAIAA 202

Query: 740 YSASRQTRQ 766
           YS+ R  R+
Sbjct: 203 YSSVRHVRR 211


>ref|XP_003617467.1| hypothetical protein MTR_5g091900 [Medicago truncatula]
           gi|355518802|gb|AET00426.1| hypothetical protein
           MTR_5g091900 [Medicago truncatula]
           gi|388503112|gb|AFK39622.1| unknown [Medicago
           truncatula]
          Length = 232

 Score =  216 bits (551), Expect = 5e-54
 Identities = 117/226 (51%), Positives = 154/226 (68%), Gaps = 3/226 (1%)
 Frame = +2

Query: 95  MSEQTNTNTEE---DKEVEKNQHLLQIEGQSTNKDVEESLYGVLERIFRAILSPEDDEKA 265
           M+E +N+N      + E E+ +    ++ ++T K V+++L  VL R+   IL P D    
Sbjct: 1   MAENSNSNGNSVHVEHEEEEEEETNNLKHRNT-KPVKQTLPEVLNRLASTILFP-DPADG 58

Query: 266 TSLFVRIKKSFYQNLPLIPEASRNSTRNLLIWTRQGSALRALLVISIGTIVLLALSGLLV 445
           TSL  RIK S   N PLIPEASRNS  ++L+WTR+GS LRALLVIS+GT+  ++LSGLLV
Sbjct: 59  TSLLRRIKNSVADNAPLIPEASRNSANDVLVWTRRGSPLRALLVISVGTVAFVSLSGLLV 118

Query: 446 FMVFFVAATVNXXXXXXXXXXXXXGGCLAIFFTCMTAIYIGALSVAVFVISSATITTIFA 625
           FM+FF+ ATVN             GG LAIFF C T+IYIGALS+A+FVIS  T  TI A
Sbjct: 119 FMLFFLTATVNAIVISLLISLAAAGGFLAIFFACATSIYIGALSIAIFVISVTTFWTIVA 178

Query: 626 VLIATGWIGFFWTVWIATKKGMSLAKHSLSMTGSALSAYSASRQTR 763
           +LI +GWIGFF+TVW+ T+K    AKHSLS+TG+A++ YS SR +R
Sbjct: 179 ILITSGWIGFFYTVWLITRKSFGFAKHSLSVTGAAITTYSTSRASR 224


>ref|XP_002305896.1| predicted protein [Populus trichocarpa] gi|222848860|gb|EEE86407.1|
           predicted protein [Populus trichocarpa]
          Length = 221

 Score =  211 bits (537), Expect = 2e-52
 Identities = 113/194 (58%), Positives = 139/194 (71%), Gaps = 2/194 (1%)
 Frame = +2

Query: 188 DVEESLYGVLERIFRAILSPEDDEKA--TSLFVRIKKSFYQNLPLIPEASRNSTRNLLIW 361
           D E  LY V+ R+   IL P+    A  TSL  RIK    +NLPL+ E SRNS + LL W
Sbjct: 23  DQEIDLYTVIHRVIVMILYPDPGSSASSTSLLQRIKIVLSENLPLLGEGSRNSGKKLLQW 82

Query: 362 TRQGSALRALLVISIGTIVLLALSGLLVFMVFFVAATVNXXXXXXXXXXXXXGGCLAIFF 541
           T++GS LRALLVIS+GTI LL+L+G+LVFM+FF+AAT N             GG LA+FF
Sbjct: 83  TQRGSPLRALLVISVGTIALLSLTGVLVFMLFFLAATFNAIVISLLMSLAAAGGFLALFF 142

Query: 542 TCMTAIYIGALSVAVFVISSATITTIFAVLIATGWIGFFWTVWIATKKGMSLAKHSLSMT 721
             + AIYIGALSVAVFVIS+ATI+   AVLI TGWIGFFWTVW+ TKK + +AKHSL++T
Sbjct: 143 AFLAAIYIGALSVAVFVISTATISATVAVLIVTGWIGFFWTVWLVTKKSIGVAKHSLTVT 202

Query: 722 GSALSAYSASRQTR 763
           GSA+SAYS+SR  +
Sbjct: 203 GSAISAYSSSRHAK 216


>ref|XP_002528501.1| conserved hypothetical protein [Ricinus communis]
           gi|223532061|gb|EEF33870.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 228

 Score =  208 bits (529), Expect = 2e-51
 Identities = 111/198 (56%), Positives = 142/198 (71%), Gaps = 2/198 (1%)
 Frame = +2

Query: 194 EESLYGVLERIFRAILSPEDDEKATSLFV--RIKKSFYQNLPLIPEASRNSTRNLLIWTR 367
           E +LY VL R+   I  P+    A SL V  RIK    +N PL+ +ASR++ R ++IWTR
Sbjct: 28  ELTLYSVLHRMASMIFVPDSRSDAASLPVMQRIKACVSENGPLLKDASRDTGRKIVIWTR 87

Query: 368 QGSALRALLVISIGTIVLLALSGLLVFMVFFVAATVNXXXXXXXXXXXXXGGCLAIFFTC 547
           +GS LRALLVIS+G+I  + L+GLLVFM+FF+AATVN             GG LA+FF C
Sbjct: 88  RGSPLRALLVISLGSITFVTLTGLLVFMLFFLAATVNAIVVSLLISLAAAGGFLALFFAC 147

Query: 548 MTAIYIGALSVAVFVISSATITTIFAVLIATGWIGFFWTVWIATKKGMSLAKHSLSMTGS 727
           +TA+YIGALS+AVFVIS+ATI+ I AVLIATGWIGF  TVW+ TKK +++AKHSL+MTGS
Sbjct: 148 VTAVYIGALSIAVFVISTATISAIIAVLIATGWIGFLCTVWLVTKKSLAVAKHSLNMTGS 207

Query: 728 ALSAYSASRQTRQDEPGK 781
           A+SAYS++R     E  K
Sbjct: 208 AISAYSSARHRHYHEVDK 225


>emb|CAQ58602.1| unknown gene [Vitis vinifera]
          Length = 217

 Score =  204 bits (520), Expect = 2e-50
 Identities = 109/189 (57%), Positives = 134/189 (70%)
 Frame = +2

Query: 200 SLYGVLERIFRAILSPEDDEKATSLFVRIKKSFYQNLPLIPEASRNSTRNLLIWTRQGSA 379
           +LY VL R+  AI  P D   +  L  R+K S   N+PL+ +AS+N+ RN++ WTR+G  
Sbjct: 24  TLYHVLHRLMAAIFFP-DPTSSAPLLRRVKISVADNVPLLRQASKNTARNVVHWTRRG-- 80

Query: 380 LRALLVISIGTIVLLALSGLLVFMVFFVAATVNXXXXXXXXXXXXXGGCLAIFFTCMTAI 559
            RALLVIS+GTI LLAL+GLLVFM+FF+AAT N             GG LA+FF C+TAI
Sbjct: 81  -RALLVISVGTITLLALTGLLVFMLFFLAATFNAIVISLLMSLAAAGGFLALFFACITAI 139

Query: 560 YIGALSVAVFVISSATITTIFAVLIATGWIGFFWTVWIATKKGMSLAKHSLSMTGSALSA 739
           YIGALSVAV VIS+ATI+ I A LI TGWIGFFWTVW+ TKK    AKHSL MTGSA++A
Sbjct: 140 YIGALSVAVVVISTATISAIIAALITTGWIGFFWTVWLVTKKSAGFAKHSLGMTGSAIAA 199

Query: 740 YSASRQTRQ 766
           YS+ R  R+
Sbjct: 200 YSSVRHVRR 208


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