BLASTX nr result

ID: Coptis24_contig00007410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007410
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237161.1| uncharacterized protein LOC100306588 precurs...   110   4e-22
ref|NP_001235889.1| uncharacterized protein LOC100500289 precurs...   108   9e-22
ref|XP_002524760.1| lipid binding protein, putative [Ricinus com...   104   2e-20
ref|XP_002524759.1| lipid binding protein, putative [Ricinus com...   103   4e-20
ref|XP_003632312.1| PREDICTED: non-specific lipid-transfer prote...   103   4e-20

>ref|NP_001237161.1| uncharacterized protein LOC100306588 precursor [Glycine max]
           gi|255628983|gb|ACU14836.1| unknown [Glycine max]
          Length = 168

 Score =  110 bits (274), Expect = 4e-22
 Identities = 75/186 (40%), Positives = 93/186 (50%), Gaps = 2/186 (1%)
 Frame = -2

Query: 662 IEMTLTAMLVTMLICTGAVAQSSSCTNMIISMSPCLNYITGNXXXXXXXXXXXXXXXXXS 483
           +EM L  +++ ML C GAVAQSS CTN+++S+SPCLNYITGN                 S
Sbjct: 6   MEMGLVLVVMAML-CAGAVAQSS-CTNVLVSLSPCLNYITGNSSTPSSGCCSQLASVVRS 63

Query: 482 QPQCLCQVLNSGG-SLGLNINQTLALQLPSACRVQTPPIXXXXXXXXXXXXXXXXXXXXX 306
           QPQCLCQVL+ GG SLGLNINQT AL LP AC VQTPP                      
Sbjct: 64  QPQCLCQVLSGGGSSLGLNINQTQALALPGACEVQTPP---------------------T 102

Query: 305 SQCNNXXXXXXXXXXXXXXXXXSVPGNGSKTVPTT-SGFTKRKFCHIALYYTLLLSLHCI 129
           SQCNN                      GSK +PTT +G +      +++   L+L+   +
Sbjct: 103 SQCNNAAASPPTGTVAESPNSAPSGTGGSKNLPTTDNGSSSGNSIKLSIPLILILAATYV 162

Query: 128 IRLT*Y 111
              T Y
Sbjct: 163 STFTSY 168


>ref|NP_001235889.1| uncharacterized protein LOC100500289 precursor [Glycine max]
           gi|255629944|gb|ACU15324.1| unknown [Glycine max]
          Length = 170

 Score =  108 bits (271), Expect = 9e-22
 Identities = 73/187 (39%), Positives = 94/187 (50%), Gaps = 3/187 (1%)
 Frame = -2

Query: 662 IEMTLTAMLVTMLICTGAVAQS-SSCTNMIISMSPCLNYITGNXXXXXXXXXXXXXXXXX 486
           ++M L  +++ ML C GA AQS SSCTN+++S+SPCLNYITGN                 
Sbjct: 6   VDMGLVLVVMAML-CAGAAAQSQSSCTNVLVSLSPCLNYITGNSSTPSSGCCSQLASVVR 64

Query: 485 SQPQCLCQVLNSGG-SLGLNINQTLALQLPSACRVQTPPIXXXXXXXXXXXXXXXXXXXX 309
           SQPQCLCQVL+ GG SLG+NINQT AL LP AC+VQTPP                     
Sbjct: 65  SQPQCLCQVLSGGGSSLGININQTQALALPVACKVQTPP--------------------- 103

Query: 308 XSQCNNXXXXXXXXXXXXXXXXXSVPGNGSKTVPTT-SGFTKRKFCHIALYYTLLLSLHC 132
            SQCNN                      GSK +PTT +G +      +++   L+L+   
Sbjct: 104 TSQCNNAAASPPTGTVAESPNSAPSGTGGSKNLPTTDNGSSSGNSIKLSIPLILILAATY 163

Query: 131 IIRLT*Y 111
           +   T Y
Sbjct: 164 VSTFTTY 170


>ref|XP_002524760.1| lipid binding protein, putative [Ricinus communis]
           gi|223535944|gb|EEF37603.1| lipid binding protein,
           putative [Ricinus communis]
          Length = 170

 Score =  104 bits (260), Expect = 2e-20
 Identities = 56/102 (54%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
 Frame = -2

Query: 668 KMIEMTLTAMLVTMLICTGAV-AQSSSCTNMIISMSPCLNYITGNXXXXXXXXXXXXXXX 492
           + +E+ L    V    C G V AQSSSCTN++ISMSPCLNYITGN               
Sbjct: 4   RRMEIILITFAVAATWCAGGVKAQSSSCTNVLISMSPCLNYITGNSSTPSSQCCTQLASV 63

Query: 491 XXSQPQCLCQVLNSG-GSLGLNINQTLALQLPSACRVQTPPI 369
             SQPQCLC+VLN G  SLG+N+NQT AL LP+ C VQTPPI
Sbjct: 64  VRSQPQCLCEVLNGGASSLGINVNQTQALALPTTCNVQTPPI 105


>ref|XP_002524759.1| lipid binding protein, putative [Ricinus communis]
           gi|223535943|gb|EEF37602.1| lipid binding protein,
           putative [Ricinus communis]
          Length = 187

 Score =  103 bits (257), Expect = 4e-20
 Identities = 56/103 (54%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
 Frame = -2

Query: 674 ALKMIEMTLTAMLVTMLICTGAVAQSSSCTNMIISMSPCLNYITGNXXXXXXXXXXXXXX 495
           ALK +EM    +LV M+IC GAVAQS  CT+ ++ ++PCLNY+TGN              
Sbjct: 2   ALKRVEMIAFLVLV-MMICHGAVAQSG-CTSALMGLAPCLNYVTGNSSTPSSSCCSQLAT 59

Query: 494 XXXSQPQCLCQVLNSGGS-LGLNINQTLALQLPSACRVQTPPI 369
              SQPQCLC +LN GGS LG+ INQTLAL LP AC VQTPP+
Sbjct: 60  VVQSQPQCLCAMLNGGGSSLGITINQTLALSLPGACNVQTPPV 102


>ref|XP_003632312.1| PREDICTED: non-specific lipid-transfer protein-like protein
           At2g13820-like [Vitis vinifera]
           gi|296085218|emb|CBI28713.3| unnamed protein product
           [Vitis vinifera]
          Length = 163

 Score =  103 bits (257), Expect = 4e-20
 Identities = 60/99 (60%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
 Frame = -2

Query: 662 IEMTLTAMLVTMLICTGAVAQSSSCTNMIISMSPCLNYITGNXXXXXXXXXXXXXXXXXS 483
           +E  LT +LV  L   GA+AQSS CTN+IISMSPCLNYITGN                 S
Sbjct: 6   METVLTMILVASL-WAGAMAQSS-CTNVIISMSPCLNYITGNSSTPSSGCCTQLASVVRS 63

Query: 482 QPQCLCQVLNSGG-SLGLNINQTLALQLPSACRVQTPPI 369
           QPQCLC+VLN GG SLG+ INQT AL LP+AC VQTPPI
Sbjct: 64  QPQCLCEVLNGGGSSLGIQINQTQALALPTACSVQTPPI 102


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