BLASTX nr result

ID: Coptis24_contig00007409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007409
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517108.1| Nonspecific lipid-transfer protein A precurs...    81   8e-14
ref|NP_001235889.1| uncharacterized protein LOC100500289 precurs...    77   2e-12
gb|AFK46793.1| unknown [Lotus japonicus]                               76   3e-12
ref|XP_002524759.1| lipid binding protein, putative [Ricinus com...    76   3e-12
ref|XP_003632312.1| PREDICTED: non-specific lipid-transfer prote...    76   3e-12

>ref|XP_002517108.1| Nonspecific lipid-transfer protein A precursor, putative [Ricinus
           communis] gi|223543743|gb|EEF45271.1| Nonspecific
           lipid-transfer protein A precursor, putative [Ricinus
           communis]
          Length = 164

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 58/143 (40%), Positives = 65/143 (45%)
 Frame = -2

Query: 434 MALKMIEMTLTAMLVTMLIYTGAVAQXXXXXXXXXXXSPCLNYITGNXXXXXXXXXXXXX 255
           MA + + M+L   +V+ML Y GAVAQ            PCLNYITGN             
Sbjct: 1   MAHRDLAMSLALAVVSML-YAGAVAQSGCTNVLISMS-PCLNYITGNSSTPSSQCCSQLS 58

Query: 254 XXXXXQPQCLCQVXXXXXXXXXXXNINQTLALQLPSACKVQTPPISQCNNXXXXXXXXXX 75
                 PQCLCQV            INQT AL LP AC VQTPPIS CN           
Sbjct: 59  SVVRSSPQCLCQVLSGGGSSLGIN-INQTQALALPGACNVQTPPISSCN--AASPAASPA 115

Query: 74  XXXXXXXSVPGNGSKTVPTTNVD 6
                  +  G GSKTVP+T VD
Sbjct: 116 GTPEIPNTPSGTGSKTVPSTEVD 138


>ref|NP_001235889.1| uncharacterized protein LOC100500289 precursor [Glycine max]
           gi|255629944|gb|ACU15324.1| unknown [Glycine max]
          Length = 170

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 52/141 (36%), Positives = 59/141 (41%)
 Frame = -2

Query: 434 MALKMIEMTLTAMLVTMLIYTGAVAQXXXXXXXXXXXSPCLNYITGNXXXXXXXXXXXXX 255
           MA   ++M L  +++ ML    A              SPCLNYITGN             
Sbjct: 1   MAHTKVDMGLVLVVMAMLCAGAAAQSQSSCTNVLVSLSPCLNYITGNSSTPSSGCCSQLA 60

Query: 254 XXXXXQPQCLCQVXXXXXXXXXXXNINQTLALQLPSACKVQTPPISQCNNXXXXXXXXXX 75
                QPQCLCQV            INQT AL LP ACKVQTPP SQCNN          
Sbjct: 61  SVVRSQPQCLCQVLSGGGSSLGIN-INQTQALALPVACKVQTPPTSQCNNAAASPPTGTV 119

Query: 74  XXXXXXXSVPGNGSKTVPTTN 12
                       GSK +PTT+
Sbjct: 120 AESPNSAPSGTGGSKNLPTTD 140


>gb|AFK46793.1| unknown [Lotus japonicus]
          Length = 169

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 53/135 (39%), Positives = 58/135 (42%), Gaps = 1/135 (0%)
 Frame = -2

Query: 416 EMTLTAMLVTMLIYTGAVAQXXXXXXXXXXXSPCLNYITGNXXXXXXXXXXXXXXXXXXQ 237
           +M +  +LV M +    VA            SPCLNYITGN                  Q
Sbjct: 5   KMNMGLILVVMAMLCAGVAAQSSCANVLVSLSPCLNYITGNSSTPSSGCCSQLAAVVRSQ 64

Query: 236 PQCLCQVXXXXXXXXXXXNINQTLALQLPSACKVQTPPISQCNNXXXXXXXXXXXXXXXX 57
           PQCLCQV            INQT AL LP ACKVQTPP SQCN                 
Sbjct: 65  PQCLCQVLGGGASSLGIN-INQTQALALPGACKVQTPPTSQCNTAATPANSPEEPAAESP 123

Query: 56  XSVP-GNGSKTVPTT 15
            S P G GSK+ PTT
Sbjct: 124 NSGPSGTGSKSTPTT 138


>ref|XP_002524759.1| lipid binding protein, putative [Ricinus communis]
           gi|223535943|gb|EEF37602.1| lipid binding protein,
           putative [Ricinus communis]
          Length = 187

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 48/109 (44%), Positives = 55/109 (50%)
 Frame = -2

Query: 434 MALKMIEMTLTAMLVTMLIYTGAVAQXXXXXXXXXXXSPCLNYITGNXXXXXXXXXXXXX 255
           MALK +EM    +LV M+ + GAVAQ            PCLNY+TGN             
Sbjct: 1   MALKRVEMIAFLVLVMMICH-GAVAQSGCTSALMGLA-PCLNYVTGNSSTPSSSCCSQLA 58

Query: 254 XXXXXQPQCLCQVXXXXXXXXXXXNINQTLALQLPSACKVQTPPISQCN 108
                QPQCLC +            INQTLAL LP AC VQTPP+SQCN
Sbjct: 59  TVVQSQPQCLCAMLNGGGSSLGIT-INQTLALSLPGACNVQTPPVSQCN 106


>ref|XP_003632312.1| PREDICTED: non-specific lipid-transfer protein-like protein
           At2g13820-like [Vitis vinifera]
           gi|296085218|emb|CBI28713.3| unnamed protein product
           [Vitis vinifera]
          Length = 163

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 57/144 (39%), Positives = 65/144 (45%)
 Frame = -2

Query: 434 MALKMIEMTLTAMLVTMLIYTGAVAQXXXXXXXXXXXSPCLNYITGNXXXXXXXXXXXXX 255
           MA   +E  LT +LV  L + GA+AQ            PCLNYITGN             
Sbjct: 1   MAEPRMETVLTMILVASL-WAGAMAQSSCTNVIISMS-PCLNYITGNSSTPSSGCCTQLA 58

Query: 254 XXXXXQPQCLCQVXXXXXXXXXXXNINQTLALQLPSACKVQTPPISQCNNXXXXXXXXXX 75
                QPQCLC+V            INQT AL LP+AC VQTPPIS+CN           
Sbjct: 59  SVVRSQPQCLCEVLNGGGSSLGIQ-INQTQALALPTACSVQTPPISRCNASSPADSPAGT 117

Query: 74  XXXXXXXSVPGNGSKTVPTTNVDS 3
                     G+ SKTVP TN DS
Sbjct: 118 PN-------SGSRSKTVPATNGDS 134


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