BLASTX nr result

ID: Coptis24_contig00007400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007400
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD52714.1|AF123698_1 putative NBS-LRR type disease resistanc...    96   4e-18
ref|XP_003613325.1| Resistance protein [Medicago truncatula] gi|...    95   5e-18
ref|XP_003613777.1| Resistance protein [Medicago truncatula] gi|...    93   2e-17
ref|XP_002302957.1| cc-nbs-lrr resistance protein [Populus trich...    92   6e-17
ref|XP_002302958.1| cc-nbs-lrr resistance protein [Populus trich...    91   1e-16

>gb|AAD52714.1|AF123698_1 putative NBS-LRR type disease resistance protein [Pisum sativum]
          Length = 165

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 52/113 (46%), Positives = 70/113 (61%), Gaps = 8/113 (7%)
 Frame = -1

Query: 317 KFLLVLDDVWDH--------DREKWNKIIHLLTCGDKGSSVIVTTRLPTVVESIRFQTFV 162
           ++ LVLDDVW+          +EKWNK+  +L CG KGSS++V+TR   V E +R     
Sbjct: 65  RYFLVLDDVWNKTQELESGLSQEKWNKLKSVLLCGSKGSSILVSTRDEDVAEIVR----- 119

Query: 161 DSTTCIINPTHELSFLPKHDCWLLFKQYAFGMENDEITPNLRKMGEEIISKCG 3
              TC    TH LS LP+++CWLLFKQYAFG + +E    L  +G+EI+ KCG
Sbjct: 120 ---TC---QTHHLSGLPENECWLLFKQYAFGHDKEE-RAGLVAIGKEIVKKCG 165


>ref|XP_003613325.1| Resistance protein [Medicago truncatula]
           gi|355514660|gb|AES96283.1| Resistance protein [Medicago
           truncatula]
          Length = 499

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/105 (46%), Positives = 64/105 (60%)
 Frame = -1

Query: 317 KFLLVLDDVWDHDREKWNKIIHLLTCGDKGSSVIVTTRLPTVVESIRFQTFVDSTTCIIN 138
           ++LLVLDDVWD  +E W ++  +L CG KG+SV+VTTRLP V   +              
Sbjct: 271 RYLLVLDDVWDDGQENWQRLKSVLACGGKGASVLVTTRLPKVAAIMGTM----------- 319

Query: 137 PTHELSFLPKHDCWLLFKQYAFGMENDEITPNLRKMGEEIISKCG 3
           P+H+LS L   DCW L KQ AFG   DE  P+L  +G+EI+ KCG
Sbjct: 320 PSHDLSMLSDTDCWELIKQRAFGPNEDE-RPDLVVIGKEIVKKCG 363


>ref|XP_003613777.1| Resistance protein [Medicago truncatula]
           gi|355515112|gb|AES96735.1| Resistance protein [Medicago
           truncatula]
          Length = 858

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 49/104 (47%), Positives = 65/104 (62%)
 Frame = -1

Query: 317 KFLLVLDDVWDHDREKWNKIIHLLTCGDKGSSVIVTTRLPTVVESIRFQTFVDSTTCIIN 138
           ++LLVLDD+WD ++E W K+  +L CG KG+S++VTTRLP V E       +  T     
Sbjct: 36  RYLLVLDDLWDEEQENWLKLKSVLACGGKGASILVTTRLPKVAE-------IMGTV---- 84

Query: 137 PTHELSFLPKHDCWLLFKQYAFGMENDEITPNLRKMGEEIISKC 6
           P H+LS L   DCW LFKQ AFG    E+T  L  +G+EI+ KC
Sbjct: 85  PAHKLSMLSDKDCWELFKQRAFGPNEVELT-KLVAIGKEILKKC 127


>ref|XP_002302957.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222844683|gb|EEE82230.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1085

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 48/105 (45%), Positives = 65/105 (61%)
 Frame = -1

Query: 317 KFLLVLDDVWDHDREKWNKIIHLLTCGDKGSSVIVTTRLPTVVESIRFQTFVDSTTCIIN 138
           KFLL+LDDVW+ D   W+K+   L+CG KGS+VIVTTRL T  + +       +TT    
Sbjct: 267 KFLLILDDVWEDDHGNWSKLKDALSCGAKGSAVIVTTRLGTAADKM-------ATT---- 315

Query: 137 PTHELSFLPKHDCWLLFKQYAFGMENDEITPNLRKMGEEIISKCG 3
           P   L+ L   D WLLF+Q AFGM + E    L+++G  I++KCG
Sbjct: 316 PVQHLATLSDEDSWLLFEQLAFGMRSAEERGRLKEIGVAIVNKCG 360


>ref|XP_002302958.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222844684|gb|EEE82231.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1086

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 47/105 (44%), Positives = 65/105 (61%)
 Frame = -1

Query: 317 KFLLVLDDVWDHDREKWNKIIHLLTCGDKGSSVIVTTRLPTVVESIRFQTFVDSTTCIIN 138
           KFLL+LDDVW+ D + W+K+   L+CG KGS+VIVTTRL  V + +       +TT    
Sbjct: 267 KFLLILDDVWEDDHDNWSKLKDALSCGAKGSAVIVTTRLGIVADKM-------ATT---- 315

Query: 137 PTHELSFLPKHDCWLLFKQYAFGMENDEITPNLRKMGEEIISKCG 3
           P   ++ L   D WLLF+Q AFGM + E    L+ +G  I++KCG
Sbjct: 316 PVQHMATLSDEDSWLLFEQLAFGMRSAEERGRLKGIGVAIVNKCG 360


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