BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007393
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16624.3| unnamed protein product [Vitis vinifera]              223   2e-56
ref|XP_002274231.1| PREDICTED: uncharacterized protein LOC100265...   223   2e-56
ref|XP_002327002.1| predicted protein [Populus trichocarpa] gi|2...   221   1e-55
ref|XP_003622549.1| Nuclear pore glycoprotein [Medicago truncatu...   217   1e-54
ref|XP_002511630.1| structural constituent of nuclear pore, puta...   217   1e-54

>emb|CBI16624.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  223 bits (569), Expect = 2e-56
 Identities = 123/187 (65%), Positives = 132/187 (70%)
 Frame = +3

Query: 39   QPQTTTASPVFSVPXXXXXXXXXXXXXKISFPGPNXXXXXXXXXXXXXXXXXXXXXXXXX 218
            Q QTTTASP+F VP              +                               
Sbjct: 547  QAQTTTASPLFGVPPSTAVAVTSSSTTAVQTSSS-----------LVVASSSGTNSTVTT 595

Query: 219  XXXPAPKLPSEITGKTVEEIIKEWNSELQERTGKFRKQAIAIADWDKRILQNRDVLLRLE 398
               PAPK+PSEITGKTVEEIIKEWN+ELQERTGKFRKQA AIA+WDK+ILQNRDVLLRLE
Sbjct: 596  AVAPAPKMPSEITGKTVEEIIKEWNTELQERTGKFRKQATAIAEWDKKILQNRDVLLRLE 655

Query: 399  IEVANVVETQATLERQLELIETHQQEVDKALQSIEEEAERVYNDERGLLLEDDAASTRDA 578
            IEVA VVETQA LERQLELIETHQQEVDKAL SIEEEAER+Y DERGLLL+D+AASTRDA
Sbjct: 656  IEVAKVVETQAQLERQLELIETHQQEVDKALLSIEEEAERIYKDERGLLLDDEAASTRDA 715

Query: 579  MYEQAEF 599
            MYEQAEF
Sbjct: 716  MYEQAEF 722


>ref|XP_002274231.1| PREDICTED: uncharacterized protein LOC100265039 [Vitis vinifera]
          Length = 775

 Score =  223 bits (569), Expect = 2e-56
 Identities = 123/187 (65%), Positives = 132/187 (70%)
 Frame = +3

Query: 39   QPQTTTASPVFSVPXXXXXXXXXXXXXKISFPGPNXXXXXXXXXXXXXXXXXXXXXXXXX 218
            Q QTTTASP+F VP              +                               
Sbjct: 514  QAQTTTASPLFGVPPSTAVAVTSSSTTAVQTSSS-----------LVVASSSGTNSTVTT 562

Query: 219  XXXPAPKLPSEITGKTVEEIIKEWNSELQERTGKFRKQAIAIADWDKRILQNRDVLLRLE 398
               PAPK+PSEITGKTVEEIIKEWN+ELQERTGKFRKQA AIA+WDK+ILQNRDVLLRLE
Sbjct: 563  AVAPAPKMPSEITGKTVEEIIKEWNTELQERTGKFRKQATAIAEWDKKILQNRDVLLRLE 622

Query: 399  IEVANVVETQATLERQLELIETHQQEVDKALQSIEEEAERVYNDERGLLLEDDAASTRDA 578
            IEVA VVETQA LERQLELIETHQQEVDKAL SIEEEAER+Y DERGLLL+D+AASTRDA
Sbjct: 623  IEVAKVVETQAQLERQLELIETHQQEVDKALLSIEEEAERIYKDERGLLLDDEAASTRDA 682

Query: 579  MYEQAEF 599
            MYEQAEF
Sbjct: 683  MYEQAEF 689


>ref|XP_002327002.1| predicted protein [Populus trichocarpa] gi|222835317|gb|EEE73752.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  221 bits (562), Expect = 1e-55
 Identities = 112/122 (91%), Positives = 117/122 (95%)
 Frame = +3

Query: 234 PKLPSEITGKTVEEIIKEWNSELQERTGKFRKQAIAIADWDKRILQNRDVLLRLEIEVAN 413
           PKLPSEITGKTVEEIIKEWNSELQERTGKFRKQA AIA+WDKRILQNRDVLLRLEIEVA 
Sbjct: 37  PKLPSEITGKTVEEIIKEWNSELQERTGKFRKQATAIAEWDKRILQNRDVLLRLEIEVAK 96

Query: 414 VVETQATLERQLELIETHQQEVDKALQSIEEEAERVYNDERGLLLEDDAASTRDAMYEQA 593
           VVETQA LER+LELIETHQQEVDKALQSIEEEAER+Y DERG LL+D+AASTRDAMYEQA
Sbjct: 97  VVETQANLERKLELIETHQQEVDKALQSIEEEAERIYKDERGSLLDDEAASTRDAMYEQA 156

Query: 594 EF 599
           EF
Sbjct: 157 EF 158


>ref|XP_003622549.1| Nuclear pore glycoprotein [Medicago truncatula]
           gi|355497564|gb|AES78767.1| Nuclear pore glycoprotein
           [Medicago truncatula]
          Length = 299

 Score =  217 bits (552), Expect = 1e-54
 Identities = 108/121 (89%), Positives = 118/121 (97%)
 Frame = +3

Query: 234 PKLPSEITGKTVEEIIKEWNSELQERTGKFRKQAIAIADWDKRILQNRDVLLRLEIEVAN 413
           PKLPSEITGKTVEEIIKEWN+ELQERTGKFRKQA AIA+WD+RILQNRDVLLRLEIEVA 
Sbjct: 92  PKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRILQNRDVLLRLEIEVAK 151

Query: 414 VVETQATLERQLELIETHQQEVDKALQSIEEEAERVYNDERGLLLEDDAASTRDAMYEQA 593
           VVETQ++LERQLELIETHQQEVDKALQS+EEEAER+Y DERGLLL+D+AASTRDAMYEQ+
Sbjct: 152 VVETQSSLERQLELIETHQQEVDKALQSVEEEAERIYKDERGLLLDDEAASTRDAMYEQS 211

Query: 594 E 596
           E
Sbjct: 212 E 212


>ref|XP_002511630.1| structural constituent of nuclear pore, putative [Ricinus communis]
           gi|223548810|gb|EEF50299.1| structural constituent of
           nuclear pore, putative [Ricinus communis]
          Length = 811

 Score =  217 bits (552), Expect = 1e-54
 Identities = 109/121 (90%), Positives = 116/121 (95%)
 Frame = +3

Query: 234 PKLPSEITGKTVEEIIKEWNSELQERTGKFRKQAIAIADWDKRILQNRDVLLRLEIEVAN 413
           PKLPSEITGKTVEEIIKEWN+ELQERTGKFRKQA AIA+WDKRIL NRDVLLRLEIEVA 
Sbjct: 604 PKLPSEITGKTVEEIIKEWNAELQERTGKFRKQAAAIAEWDKRILHNRDVLLRLEIEVAK 663

Query: 414 VVETQATLERQLELIETHQQEVDKALQSIEEEAERVYNDERGLLLEDDAASTRDAMYEQA 593
           VVETQA LERQLELIETHQQEVDKA+QS+EEEAER+Y DERGLLL+D+AASTRDAMYEQA
Sbjct: 664 VVETQANLERQLELIETHQQEVDKAVQSMEEEAERIYKDERGLLLDDEAASTRDAMYEQA 723

Query: 594 E 596
           E
Sbjct: 724 E 724