BLASTX nr result
ID: Coptis24_contig00007392
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00007392
(2477 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280705.1| PREDICTED: uncharacterized protein LOC100266... 229 e-104
emb|CAN61069.1| hypothetical protein VITISV_006590 [Vitis vinifera] 218 e-100
ref|XP_002275184.1| PREDICTED: uncharacterized protein LOC100256... 218 e-100
ref|XP_002511116.1| conserved hypothetical protein [Ricinus comm... 197 4e-92
ref|XP_002318158.1| predicted protein [Populus trichocarpa] gi|2... 174 8e-84
>ref|XP_002280705.1| PREDICTED: uncharacterized protein LOC100266395 [Vitis vinifera]
Length = 765
Score = 229 bits (584), Expect(2) = e-104
Identities = 154/434 (35%), Positives = 222/434 (51%), Gaps = 9/434 (2%)
Frame = +2
Query: 431 MGLPQVPSE-FADEAALSLSTLVQNPPRVADTTSSDRDGSHGGSTQNKLSGDFQCTCHVD 607
MGLPQV S A+E SLST VQ P R +S D G HGG+ N+++ + C+ D
Sbjct: 1 MGLPQVSSSAVAEEVTTSLSTFVQTPSRFVGVSSCDLSGLHGGNPGNRMAMELPCSSLGD 60
Query: 608 IQ----LKLPEDCTGL-VKNKGASDIAICVHGMPIGFKNKNVWFLNKSGRDVQSPLSRVV 772
Q L+LP+D GL N+G S++ H + IG KN F KS R++QSP+SR+V
Sbjct: 61 FQRKTILELPQDPGGLDTHNEGTSNL----HRLKIGSTEKNGLFTRKSSRNIQSPVSRIV 116
Query: 773 GFGSGESDSFLNKFEGTSGTCVIVSPSIEDNNNNIELNGPQVRKRLLSSLNDILCLDKKN 952
GF S S N FEG + V+ + + + +G QVRKRLLS L+ +L D+ +
Sbjct: 117 GFESRALSSPANIFEGNQPSSVVACIT----GDATDASGLQVRKRLLSPLSGMLLPDQFD 172
Query: 953 GDTQEIPKGGFKIDXXXXXXXXXXXXXQDHRKCELGNLNHVKTSVWSIPRLANWDDSLDG 1132
GD + + QDH+K + + N+ +WS P W +S D
Sbjct: 173 GDAHDTRHLIHQTAPQGCSDNYNVSESQDHKKANIESSNYFSPPIWSAPGSPEWQNSPDD 232
Query: 1133 NSCTRSLCFTDGPVLENMETLH---CLSLPELDPSRRISKVRMQTGAIAISPEKVIXXXX 1303
S+ TDGP+L L LS P L+ +++ + AIAIS KV+
Sbjct: 233 TYGANSIFLTDGPLLGKKGLLSHNPVLSSPGLNYFGETAELGSHSEAIAISSIKVLSPPL 292
Query: 1304 XXXXXGPKFSERMKAARVCRDAMKEVREGFLNFRSTQKSLNGAVSDFVIAQKEEEFRIPC 1483
GPKF ER+KAA C+D +E+ + +L + ++SL+ VS + +QKEE F +
Sbjct: 293 SLSPLGPKFPERIKAAGRCKDNREELDDDYLTLKDVEQSLDRTVSGLLSSQKEEYFGLSS 352
Query: 1484 MSFENLEVSRAEFDAFTPVSITRIGRHWDTDSEPSPQCGKCTXXXXXXXXXXXXXXXFEE 1663
SFE++++ + + + FTP I+ +G H DS +PQC K FEE
Sbjct: 353 KSFEDIDLLQKKLNLFTPEIISSMGEHCGHDSTINPQCIKYVRILSGLHVRRSLVGSFEE 412
Query: 1664 SLLSGRFSSCKLSQ 1705
SLLSGR SS K+SQ
Sbjct: 413 SLLSGRLSSGKVSQ 426
Score = 177 bits (450), Expect(2) = e-104
Identities = 86/112 (76%), Positives = 101/112 (90%)
Frame = +1
Query: 1786 QRIDGFLAVLNVTGGSFSPSSQKLPFAVTSVDGDSCLLYYASIDLSGNSSSNKWKEPKLK 1965
Q+IDGFLAVLNVTGG+FSP +KLPFAVTSVDGD+ LLYY+SIDL+GN S+K++ PK+K
Sbjct: 426 QKIDGFLAVLNVTGGNFSPKPKKLPFAVTSVDGDNYLLYYSSIDLAGNFPSDKYRGPKMK 485
Query: 1966 RSLSNDDSLASKSRLRIPMKGCIQLVLSNPEKTPLHTFFCNYNLSDMPAGTK 2121
RSLS +DS A K+RLRIPMKG IQLVLSNPEKTP+HTF CNY+LSDMP+GTK
Sbjct: 486 RSLSINDSRAEKNRLRIPMKGRIQLVLSNPEKTPIHTFLCNYDLSDMPSGTK 537
>emb|CAN61069.1| hypothetical protein VITISV_006590 [Vitis vinifera]
Length = 767
Score = 218 bits (556), Expect(2) = e-100
Identities = 152/430 (35%), Positives = 221/430 (51%), Gaps = 5/430 (1%)
Frame = +2
Query: 431 MGLPQVPS-EFADEAALSLSTLVQNPPRVADTTSSDRDGSHGGSTQNKLSGDFQCTCHVD 607
MGLPQV S + A+E A S+ST +Q+P + A ++ D DG GS +++ GD C+ D
Sbjct: 1 MGLPQVSSIKTAEEVAESISTFLQSP-QFAGLSTCDLDGMSRGSP-SRMGGDSICSPSGD 58
Query: 608 IQ----LKLPEDCTGLVKNKGASDIAICVHGMPIGFKNKNVWFLNKSGRDVQSPLSRVVG 775
Q L+ P+ L + KG D+ V + I ++ WF K RD+Q+P+SR+VG
Sbjct: 59 FQRKSSLEPPKISDDLFEQKGTVDVTSTV--LKISSMDEVAWFPPKHRRDIQTPVSRIVG 116
Query: 776 FGSGESDSFLNKFEGTSGTCVIVSPSIEDNNNNIELNGPQVRKRLLSSLNDILCLDKKNG 955
F SG +S EG S + + N + +G RKR+LS LN +L ++ NG
Sbjct: 117 FESGGMNSMSTGLEGDSVDHGHSTAPVGSTVNESKSSGSLARKRMLSPLNGMLFPEQFNG 176
Query: 956 DTQEIPKGGFKIDXXXXXXXXXXXXXQDHRKCELGNLNHVKTSVWSIPRLANWDDSLDGN 1135
D +I F ++ QDH+K +G + + +WSI + ++ N
Sbjct: 177 DPLDIGCSNFSMNTPAFNGGFGGVMAQDHKKANIGCKKNFTSPIWSISNCSEHNNIFYDN 236
Query: 1136 SCTRSLCFTDGPVLENMETLHCLSLPELDPSRRISKVRMQTGAIAISPEKVIXXXXXXXX 1315
S S+ TDG N + C+S PEL+ R SKVR +TG+I ISP+KV+
Sbjct: 237 SRATSIFQTDGL---NQDHNTCVSSPELNHFRESSKVRSKTGSIMISPKKVVSPPLSLSP 293
Query: 1316 XGPKFSERMKAARVCRDAMKEVREGFLNFRSTQKSLNGAVSDFVIAQKEEEFRIPCMSFE 1495
GPKFSERM+ A CR+ +E+ +L ++ +KSLNGAVSD Q+EE FR SF+
Sbjct: 294 LGPKFSERMRTAGGCRNVTEEMHSDYLTLKNMEKSLNGAVSDIFFTQEEEVFRTTRKSFD 353
Query: 1496 NLEVSRAEFDAFTPVSITRIGRHWDTDSEPSPQCGKCTXXXXXXXXXXXXXXXFEESLLS 1675
+E+ EF + + + T I +S P+PQ K FEESLLS
Sbjct: 354 GVELLHKEFYS-SSLESTGISWPLSQNSAPTPQYMKLVRNLSRLPVRRSLVGSFEESLLS 412
Query: 1676 GRFSSCKLSQ 1705
GRFS K +Q
Sbjct: 413 GRFSYGKFNQ 422
Score = 175 bits (444), Expect(2) = e-100
Identities = 86/112 (76%), Positives = 98/112 (87%)
Frame = +1
Query: 1786 QRIDGFLAVLNVTGGSFSPSSQKLPFAVTSVDGDSCLLYYASIDLSGNSSSNKWKEPKLK 1965
QRIDGFLAVL+VTGG FSP S+KLPF+V+SVDGDS LLYYASIDL+GN S +++ KL
Sbjct: 422 QRIDGFLAVLSVTGGDFSPKSRKLPFSVSSVDGDSYLLYYASIDLAGNLLSKRFRAQKLN 481
Query: 1966 RSLSNDDSLASKSRLRIPMKGCIQLVLSNPEKTPLHTFFCNYNLSDMPAGTK 2121
R LSNDDS +KS LRIPMKG IQLVLSNPEKTPLH+FFCNY+LSDMP+GTK
Sbjct: 482 RGLSNDDSQTAKSHLRIPMKGRIQLVLSNPEKTPLHSFFCNYDLSDMPSGTK 533
>ref|XP_002275184.1| PREDICTED: uncharacterized protein LOC100256630 [Vitis vinifera]
Length = 759
Score = 218 bits (556), Expect(2) = e-100
Identities = 152/430 (35%), Positives = 221/430 (51%), Gaps = 5/430 (1%)
Frame = +2
Query: 431 MGLPQVPS-EFADEAALSLSTLVQNPPRVADTTSSDRDGSHGGSTQNKLSGDFQCTCHVD 607
MGLPQV S + A+E A S+ST +Q+P + A ++ D DG GS +++ GD C+ D
Sbjct: 1 MGLPQVSSIKTAEEVAESISTFLQSP-QFAGLSTCDLDGMSRGSP-SRMGGDSICSPSGD 58
Query: 608 IQ----LKLPEDCTGLVKNKGASDIAICVHGMPIGFKNKNVWFLNKSGRDVQSPLSRVVG 775
Q L+ P+ L + KG D+ V + I ++ WF K RD+Q+P+SR+VG
Sbjct: 59 FQRKSSLEPPKISDDLFEQKGTVDVTSTV--LKISSMDEVAWFPPKHRRDIQTPVSRIVG 116
Query: 776 FGSGESDSFLNKFEGTSGTCVIVSPSIEDNNNNIELNGPQVRKRLLSSLNDILCLDKKNG 955
F SG +S EG S + + N + +G RKR+LS LN +L ++ NG
Sbjct: 117 FESGGMNSMSTGLEGDSVDHGHSTAPVGSTVNESKSSGSLARKRMLSPLNGMLFPEQFNG 176
Query: 956 DTQEIPKGGFKIDXXXXXXXXXXXXXQDHRKCELGNLNHVKTSVWSIPRLANWDDSLDGN 1135
D +I F ++ QDH+K +G + + +WSI + ++ N
Sbjct: 177 DPLDIGCSNFSMNTPAFNGGFGGVMAQDHKKANIGCKKNFTSPIWSISNCSEHNNIFYDN 236
Query: 1136 SCTRSLCFTDGPVLENMETLHCLSLPELDPSRRISKVRMQTGAIAISPEKVIXXXXXXXX 1315
S S+ TDG N + C+S PEL+ R SKVR +TG+I ISP+KV+
Sbjct: 237 SRATSIFQTDGL---NQDHNTCVSSPELNHFRESSKVRSKTGSIMISPKKVVSPPLSLSP 293
Query: 1316 XGPKFSERMKAARVCRDAMKEVREGFLNFRSTQKSLNGAVSDFVIAQKEEEFRIPCMSFE 1495
GPKFSERM+ A CR+ +E+ +L ++ +KSLNGAVSD Q+EE FR SF+
Sbjct: 294 LGPKFSERMRTAGGCRNVTEEMHSDYLTLKNMEKSLNGAVSDIFFTQEEEVFRTTRKSFD 353
Query: 1496 NLEVSRAEFDAFTPVSITRIGRHWDTDSEPSPQCGKCTXXXXXXXXXXXXXXXFEESLLS 1675
+E+ EF + + + T I +S P+PQ K FEESLLS
Sbjct: 354 GVELLHKEFYS-SSLESTGISWPLSQNSAPTPQYMKLVRNLSRLPVRRSLVGSFEESLLS 412
Query: 1676 GRFSSCKLSQ 1705
GRFS K +Q
Sbjct: 413 GRFSYGKFNQ 422
Score = 175 bits (444), Expect(2) = e-100
Identities = 86/112 (76%), Positives = 98/112 (87%)
Frame = +1
Query: 1786 QRIDGFLAVLNVTGGSFSPSSQKLPFAVTSVDGDSCLLYYASIDLSGNSSSNKWKEPKLK 1965
QRIDGFLAVL+VTGG FSP S+KLPF+V+SVDGDS LLYYASIDL+GN S +++ KL
Sbjct: 422 QRIDGFLAVLSVTGGDFSPKSRKLPFSVSSVDGDSYLLYYASIDLAGNLLSKRFRAQKLN 481
Query: 1966 RSLSNDDSLASKSRLRIPMKGCIQLVLSNPEKTPLHTFFCNYNLSDMPAGTK 2121
R LSNDDS +KS LRIPMKG IQLVLSNPEKTPLH+FFCNY+LSDMP+GTK
Sbjct: 482 RGLSNDDSQTAKSHLRIPMKGRIQLVLSNPEKTPLHSFFCNYDLSDMPSGTK 533
>ref|XP_002511116.1| conserved hypothetical protein [Ricinus communis]
gi|223550231|gb|EEF51718.1| conserved hypothetical
protein [Ricinus communis]
Length = 692
Score = 197 bits (502), Expect(2) = 4e-92
Identities = 139/429 (32%), Positives = 209/429 (48%), Gaps = 4/429 (0%)
Frame = +2
Query: 431 MGLPQVPSE-FADEAALSLSTLVQNPPRVADTTSSDRDGSHGGSTQNKLSGDFQCTCHVD 607
MGLPQV S +E A+SLSTLV NPPR+ +S D G GG+ N++
Sbjct: 1 MGLPQVSSSSIVEEMAVSLSTLVANPPRIVGVSSCDLSGMQGGNVGNRM----------- 49
Query: 608 IQLKLPEDCTGLVKNKGASDIAICVHGMPIGFKNKNVWFLNKSGRDVQSPLSRVVGFGSG 787
Q+ LP G ++ K + +KN W NK+G+++Q+P+ R+VGF S
Sbjct: 50 -QMDLPRSSFGDIQKKTIVE-------------HKNDWLTNKNGQNIQTPIPRIVGFESR 95
Query: 788 ESDSFLNKFEGTSGTCVIVSPSIEDNNNNIELNGPQVRKRLLSSLNDILCLDKKNGDTQE 967
++ +N F G ++S S ++ IE G VRKRLLS L+ +L DK NGD+ +
Sbjct: 96 GLNTPVNLFNGKQSASTVLSSS----DDAIESTGSLVRKRLLSPLSGMLLPDKFNGDSLD 151
Query: 968 IPKGGFKIDXXXXXXXXXXXXXQDHRKCELGNLNHVKTSVWSIPRLANWDDSLDGNSCTR 1147
I + ++ + Q+H+K +G+ N++ +S W W++ D N T
Sbjct: 152 IGENIYRSNFWSGKGNHKVSVSQEHKKAHIGSSNYLISSKWC----PEWNNLQDDNYQTN 207
Query: 1148 SLCFTDGPVLENMETL---HCLSLPELDPSRRISKVRMQTGAIAISPEKVIXXXXXXXXX 1318
S +DG L+ E +S L S +KVR QTGAIAI KV+
Sbjct: 208 STFVSDGFALDKKELKPQNQFVSPVGLSYSGETTKVRSQTGAIAIPVNKVLSSTLSLSPL 267
Query: 1319 GPKFSERMKAARVCRDAMKEVREGFLNFRSTQKSLNGAVSDFVIAQKEEEFRIPCMSFEN 1498
GPK ER+K+ A K + + +L F+ ++SL+G S + +QK+++ S E+
Sbjct: 268 GPKLQERVKSVGFPSCAAKNLNDEYLTFKDIEQSLDGTFSRILSSQKDKDSSRLQKSLED 327
Query: 1499 LEVSRAEFDAFTPVSITRIGRHWDTDSEPSPQCGKCTXXXXXXXXXXXXXXXFEESLLSG 1678
+ + EFD FTP + + + DS P+ C K FEESLLSG
Sbjct: 328 FDNLQKEFDVFTPEITAGMVQPLEEDSSPTRPCVKLGRTLIGLPVKRSLVGSFEESLLSG 387
Query: 1679 RFSSCKLSQ 1705
R S K+SQ
Sbjct: 388 RLLSGKVSQ 396
Score = 169 bits (429), Expect(2) = 4e-92
Identities = 83/112 (74%), Positives = 99/112 (88%)
Frame = +1
Query: 1786 QRIDGFLAVLNVTGGSFSPSSQKLPFAVTSVDGDSCLLYYASIDLSGNSSSNKWKEPKLK 1965
QRIDGFLAVLNVTGG+FSP ++KLPFA TSV+GD+ LLYY+SIDL+G+ SN+ K++
Sbjct: 396 QRIDGFLAVLNVTGGNFSPQTKKLPFAATSVEGDNYLLYYSSIDLAGHLLSNECSGAKMR 455
Query: 1966 RSLSNDDSLASKSRLRIPMKGCIQLVLSNPEKTPLHTFFCNYNLSDMPAGTK 2121
RSLS +DS A KSRLRIP+KG IQLVLSNPEKTP+HTFFCNY+L+DMPAGTK
Sbjct: 456 RSLSINDSHAEKSRLRIPVKGRIQLVLSNPEKTPIHTFFCNYDLNDMPAGTK 507
>ref|XP_002318158.1| predicted protein [Populus trichocarpa] gi|222858831|gb|EEE96378.1|
predicted protein [Populus trichocarpa]
Length = 700
Score = 174 bits (441), Expect(2) = 8e-84
Identities = 82/112 (73%), Positives = 100/112 (89%)
Frame = +1
Query: 1786 QRIDGFLAVLNVTGGSFSPSSQKLPFAVTSVDGDSCLLYYASIDLSGNSSSNKWKEPKLK 1965
QRIDGFLAVLN+TGG+FSP +QKLPF VTS+DG++ LLYYASIDL+GN +NK+ + ++
Sbjct: 395 QRIDGFLAVLNITGGNFSPKTQKLPFTVTSMDGNNYLLYYASIDLAGNVQANKYSDQNMR 454
Query: 1966 RSLSNDDSLASKSRLRIPMKGCIQLVLSNPEKTPLHTFFCNYNLSDMPAGTK 2121
RSLS DDS + +SRLRIPMKG +QLVLSNPEKTP+HTFFC+Y+LSDMPAGTK
Sbjct: 455 RSLSIDDSRSERSRLRIPMKGRMQLVLSNPEKTPIHTFFCSYDLSDMPAGTK 506
Score = 165 bits (418), Expect(2) = 8e-84
Identities = 132/428 (30%), Positives = 196/428 (45%), Gaps = 3/428 (0%)
Frame = +2
Query: 431 MGLPQVPSE-FADEAALSLSTLVQNPPRVADTTSSDRDGSHGGSTQNKLSGDFQCTCHVD 607
MGLPQ S A+E A SLST+VQ PR+ +S D G HGG+ ++ + CT D
Sbjct: 1 MGLPQFSSSSIAEEVATSLSTIVQTSPRIVGVSSCDLSGMHGGNLGHRRQIEMPCTSFTD 60
Query: 608 IQLKLPEDCTGLVKNKGASDIAICVHGMPIGFKNKNVWFLNKSGRDVQSPLSRVVGFGSG 787
++ K + NK+ +KSG++VQ+P+ R++GF S
Sbjct: 61 LKKKTIVE-------------------------NKDGLLSHKSGQNVQTPVPRIIGFESK 95
Query: 788 ESDSFLNKFEGTSGTCVIVSPSIEDNNNNIELNGPQVRKRLLSSLNDILCLDKKNGDTQE 967
+S + F G +V+ +N E +G +KRLLS L+ +L ++ NG + +
Sbjct: 96 GLNSPVGVFNGNQTASSVVTI----RSNAFESSGSD-KKRLLSPLSGMLHPEQFNGASLD 150
Query: 968 IPKGGFKIDXXXXXXXXXXXXXQDHRKCELGNLNHVKTSVWSIPRLANWDDSLDGNSCTR 1147
I G + Q+H+K +GN ++ S WS L W +S D
Sbjct: 151 IGDGICMNNLWGSKDNYKVSMSQEHKKAHIGNSSY---SNWSASCLQEWKNSPDDTCREN 207
Query: 1148 SLCFTDGPVLEN-METLHCLSLPE-LDPSRRISKVRMQTGAIAISPEKVIXXXXXXXXXG 1321
SL F DGPVLE ++ P L+ KV+ Q AIAI K G
Sbjct: 208 SLFFFDGPVLETELKPPDQFFYPHGLNYFEETMKVKHQISAIAIPLIKAASPPLSLSPLG 267
Query: 1322 PKFSERMKAARVCRDAMKEVREGFLNFRSTQKSLNGAVSDFVIAQKEEEFRIPCMSFENL 1501
PK SE +K+ + E+ + +L F ++SLNG VS + ++K+ F++ S +N
Sbjct: 268 PKLSEGIKSPGTGTNITTELDDDYLAFTDIEQSLNGTVSGILSSRKDGGFKMLDESLDNF 327
Query: 1502 EVSRAEFDAFTPVSITRIGRHWDTDSEPSPQCGKCTXXXXXXXXXXXXXXXFEESLLSGR 1681
+ R +FD FTP + IG+ W DS + FEESLLSGR
Sbjct: 328 DNLRTKFDVFTPEITSGIGQPWCEDSNLGSLNVRSFRSFTGVPVRRSLVGSFEESLLSGR 387
Query: 1682 FSSCKLSQ 1705
SS K+SQ
Sbjct: 388 LSSGKVSQ 395