BLASTX nr result
ID: Coptis24_contig00007389
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00007389
(1216 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002510612.1| conserved hypothetical protein [Ricinus comm... 162 2e-37
emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera] 150 6e-34
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] 145 2e-32
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ... 145 2e-32
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera] 143 8e-32
>ref|XP_002510612.1| conserved hypothetical protein [Ricinus communis]
gi|223551313|gb|EEF52799.1| conserved hypothetical
protein [Ricinus communis]
Length = 402
Score = 162 bits (410), Expect = 2e-37
Identities = 115/370 (31%), Positives = 176/370 (47%), Gaps = 23/370 (6%)
Frame = +2
Query: 176 WLELPSHLTFVIAEKLFYNVKDLIQFGAVCMYWQSVFIEIRKDXXXXXXXXXXXXXXTEF 355
W ELP L VIA+K N D + AVC WQS I K +
Sbjct: 5 WAELPPELLQVIADK-HTNYVDYLVTRAVCGSWQSA---IAKRPHNHLLCQLPFLLLPYY 60
Query: 356 NSDDQTRSCYSLTEDRVSNFQFRVPHDWHCQSSSHGWLVIVRNNLDVFLFNPFLSVNNEI 535
++ R Y++++D++ + ++ C SSHGWL++V ++ +FL NP I
Sbjct: 61 QNNPDRRGFYNISDDKIYVLELPEAYEKRCCGSSHGWLIMVEDSPSIFLLNPL--TRERI 118
Query: 536 QLPPITAFTRDPRELVFHND------------------YITKAVLSANPILNPNYVVMVI 661
+LP ++ F+ P ++VF N +I KA+LS++P L+ N++ +VI
Sbjct: 119 ELPALSTFSIFPTDVVFENSRNLNENFIMREKFHIRDTFIVKAILSSDPSLDTNFMAVVI 178
Query: 662 HGGCRLLAFWRPGDKAWTSLDSKYTV---VMDIIYFKEQFYVVTHFGEVLAFDLNHPYPK 832
+G LAF R GD AWT +D + D ++ + + V G + L
Sbjct: 179 YGVNENLAFCRSGDAAWTVIDETTSPPRRYKDALFRAGKLFAVDQTGGISI--LTEENTM 236
Query: 833 VSVISPKPTDYSLTCQSKYLV-VSSGDLLQVSRRRTGTGGYFY-TRRFELFKLDTTQTEW 1006
+ P + YL S +LL V R R Y Y T RFE++KLD W
Sbjct: 237 IRFADPPLVSSRTGYKQWYLASYSEEELLIVCRYRKVVPDYEYKTERFEIYKLD--DGGW 294
Query: 1007 VEVKSLGGRILLLGDNTSLSLSASEFPKCKSNSIYFTDDFHEAYSSRVYQMESDGPVPHD 1186
+ +SLG ++L LG N SLS+SA ++ KCK N IYFTDD+ V++ HD
Sbjct: 295 KKKESLGDKMLFLGGNGSLSISALDYSKCKGNCIYFTDDYIRLCKDYVWE-------GHD 347
Query: 1187 IGVFNLEDGS 1216
G++++EDG+
Sbjct: 348 YGIYDIEDGN 357
>emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]
Length = 394
Score = 150 bits (379), Expect = 6e-34
Identities = 114/378 (30%), Positives = 172/378 (45%), Gaps = 34/378 (8%)
Frame = +2
Query: 176 WLELPSHLTFVIAEKLFYNVKDLIQFGAVCMYWQSVFIEIRKDXXXXXXXXXXXXXXTEF 355
W +LP L +I ++L + D+I+FG VC +W V +E R+
Sbjct: 6 WSKLPKELIELIFDEL-QHAGDIIRFGTVCRFWGLVALEARQQVFKPLRPLSPMLLLPP- 63
Query: 356 NSDDQTRSCYSLTEDRVSNFQFRVPHDWHCQSSSHGWLVIVRNNL--DVFLFNPFLSVNN 529
N DD Y + + Q D C +S +GWL+ + + ++ NP V
Sbjct: 64 NKDDGAHKLYDFFKKKAYKIQIPAMRDKWCCNSWNGWLITINHTFPYEICCLNPISGV-- 121
Query: 530 EIQLPPITAFTRDPREL--VFHNDYITKAVLSANPI-LNPNYVVMVIHGGCRLLAFWRPG 700
+I LPP F P +L ++ K VLS+ P N N V+M IH LAF +PG
Sbjct: 122 QIDLPPAITFEDSPPDLDETPIEFFLNKVVLSSTPSPSNANCVIMAIHSNYNKLAFCKPG 181
Query: 701 DKAWTSLDSKYTVVMDIIYFKEQFYVVTHFGEVLAFDLNHPYPKVS--VISPKPTDYSLT 874
DK W +L S+ D++Y+K+ FY + +V+ D+ P+V + PK +
Sbjct: 182 DKRWITLKSEDIQYKDLLYYKDNFYAIGR-SKVVQCDIGDD-PRVIPFALLPKMGYF--- 236
Query: 875 CQSKYLVVSSGDLLQVSRR------------RTGTGGY---------------FYTRRFE 973
Q +YLV SSG LL V R R T G+ + T F+
Sbjct: 237 -QYRYLVESSGCLLYVLRYMDLKDNEDPLKLRYETTGFKVFDLDSDKRKFSYRYETTTFK 295
Query: 974 LFKLDTTQTEWVEVKSLGGRILLLGDNTSLSLSASEFPKCKSNSIYFTDDFHEAYSSRVY 1153
++ D Q +W +K++ + LLLG N ++S+S +F KSN IYF DD+ E Y Y
Sbjct: 296 VYNFDFDQKKWKLIKNIKEKALLLGHNQAISISTKKFDGFKSNHIYFLDDYKEGYFENTY 355
Query: 1154 QMESDGPVPHDIGVFNLE 1207
HD+GVFN++
Sbjct: 356 GC-------HDMGVFNIK 366
>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
Length = 389
Score = 145 bits (367), Expect = 2e-32
Identities = 111/381 (29%), Positives = 174/381 (45%), Gaps = 34/381 (8%)
Frame = +2
Query: 176 WLELPSHLTFVIAEKLFYNVKDLIQFGAVCMYWQSVFIEIRKDXXXXXXXXXXXXXXTEF 355
W +L L IA+K F D ++F AVC W++ + +
Sbjct: 4 WSQLHPELLDFIAKK-FKIYTDYVRFRAVCHNWRASVPKT----PHHLPTQLPWLMLPQS 58
Query: 356 NSDDQTRSCYSLTEDRVSNFQF-RVPHDWHCQSSSHGWLVIVRNNLDVFLFNPFLSVNNE 532
R +SL+ ++ Q H + SSHGWL+I+ ++FL NP ++
Sbjct: 59 QPHHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPL--TRSK 116
Query: 533 IQLPPITAF-------------------------TRDPRELVFHNDYITKAVLSANPILN 637
+ LPP++ F TR +++ + +I K +LS++P
Sbjct: 117 VHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKM--RDSFIKKTILSSSPANG 174
Query: 638 PNYVVMVIHGGCRLLAFWRPGDKAWTSLDSKYTVVMDIIYFKEQFYVVTHFGEVLAFDLN 817
+++ +VI LA R D +WT L+ + D+I+ + FY V +G + D++
Sbjct: 175 SDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVS 234
Query: 818 HPYPKVSVISPKPTDYSLTCQSKYLVVSSGDLLQVSR--------RRTGTGGYFYTRRFE 973
P+VS+I P + Q YLV S +LL V+R T + T RF+
Sbjct: 235 GSSPRVSIIE-MPQQFGGDLQ--YLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQ 291
Query: 974 LFKLDTTQTEWVEVKSLGGRILLLGDNTSLSLSASEFPKCKSNSIYFTDDFHEAYSSRVY 1153
+ +LD+ W V SLG R L LG+N SLSLS+ +FP CK N IY+TDD+ E +
Sbjct: 292 VCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIG 351
Query: 1154 QMESDGPVPHDIGVFNLEDGS 1216
+ D+G+FNLEDGS
Sbjct: 352 GEQ-------DLGIFNLEDGS 365
>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
Length = 389
Score = 145 bits (366), Expect = 2e-32
Identities = 111/381 (29%), Positives = 173/381 (45%), Gaps = 34/381 (8%)
Frame = +2
Query: 176 WLELPSHLTFVIAEKLFYNVKDLIQFGAVCMYWQSVFIEIRKDXXXXXXXXXXXXXXTEF 355
W +L L IA+K F D ++F AVC W++ + +
Sbjct: 4 WSQLHPELLDFIAKK-FKIYTDYVRFRAVCHNWRASVPKT----PHHLPTQLPWLMLPQS 58
Query: 356 NSDDQTRSCYSLTEDRVSNFQF-RVPHDWHCQSSSHGWLVIVRNNLDVFLFNPFLSVNNE 532
R +SL+ ++ Q H + SSHGWL+I+ ++FL NP ++
Sbjct: 59 QPHHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPL--TRSK 116
Query: 533 IQLPPITAF-------------------------TRDPRELVFHNDYITKAVLSANPILN 637
+ LPP++ F TR +++ + +I K +LS++P
Sbjct: 117 VHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKM--RDSFIKKTILSSSPANG 174
Query: 638 PNYVVMVIHGGCRLLAFWRPGDKAWTSLDSKYTVVMDIIYFKEQFYVVTHFGEVLAFDLN 817
+++ +VI LA R D +WT L+ + D+I+ + FY V +G + D++
Sbjct: 175 SDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVS 234
Query: 818 HPYPKVSVISPKPTDYSLTCQSKYLVVSSGDLLQVSR--------RRTGTGGYFYTRRFE 973
P+VS+I P + Q YLV S +LL V+R T + T RF+
Sbjct: 235 GSSPRVSIIE-MPQQFGGDLQ--YLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQ 291
Query: 974 LFKLDTTQTEWVEVKSLGGRILLLGDNTSLSLSASEFPKCKSNSIYFTDDFHEAYSSRVY 1153
+ +LD W V SLG R L LG+N SLSLS+ +FP CK N IY+TDD+ E +
Sbjct: 292 VCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIG 351
Query: 1154 QMESDGPVPHDIGVFNLEDGS 1216
+ D+G+FNLEDGS
Sbjct: 352 GEQ-------DLGIFNLEDGS 365
>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
Length = 1290
Score = 143 bits (361), Expect = 8e-32
Identities = 110/337 (32%), Positives = 162/337 (48%), Gaps = 20/337 (5%)
Frame = +2
Query: 176 WLELPSHLTFVIAEKLFYNVKDLIQFGAVCMYWQSVFIEIRKDXXXXXXXXXXXXXXTEF 355
W ++P +IAEKL ++V+D ++FG VC W S+F +D
Sbjct: 922 WSKMPDDPLKLIAEKL-HSVEDYVRFGGVCKSWYSIF----EDKECCCPSSKSPWLMLAE 976
Query: 356 NSDDQTRSCYSLTEDRVSNFQFRVPH---DWHCQSSSHGWLVIVRNNLDVFLFNPFLSVN 526
+ + R YS +V ++ R+P W C S +GWLV + +LD+ L NP V
Sbjct: 977 KENSEIRGFYSPLSGKV--YEIRLPEVVGKW-CWGSPYGWLVTIGTDLDMCLLNPLTRV- 1032
Query: 527 NEIQLPPITAF----------TRDPRELVFHNDYITKAVLSANPILNPNYVVMVIHGGCR 676
+I LP + A T+ R + +I KAVLS+ P +P+ VM+I+
Sbjct: 1033 -QILLPSLRACPNLNTLIDSSTQGSRS---KDIFIYKAVLSSAPS-SPDCAVMIIYSDYG 1087
Query: 677 LLAFWRPGDKAWTSLDSKYTVVMDIIYFKEQFYVVTHFGEVLAFDLNHPYPKVSVISPKP 856
LAF +PG + WT L+S+ V DIIYF F V EV D++ K + P
Sbjct: 1088 RLAFTKPGHQTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISGSQLKTIRFAAAP 1147
Query: 857 TDYS---LTCQSKYLVVSSGDLLQVSRRRTGTGG----YFYTRRFELFKLDTTQTEWVEV 1015
+ ++KYLV S G++ V+R T Y T F + KLD W EV
Sbjct: 1148 ALQDVDEIEYEAKYLVESGGEIYMVTRNLYDTARRDIPYMRTWTFSVLKLDMCNKRWEEV 1207
Query: 1016 KSLGGRILLLGDNTSLSLSASEFPKCKSNSIYFTDDF 1126
++L LG+N S S AS++P+ + NSIYFTDD+
Sbjct: 1208 ENLDHCSFFLGNNHSFSTWASDYPEFRKNSIYFTDDY 1244