BLASTX nr result

ID: Coptis24_contig00007388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007388
         (872 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319503.1| predicted protein [Populus trichocarpa] gi|1...   326   5e-87
emb|CBI39540.3| unnamed protein product [Vitis vinifera]              324   1e-86
ref|XP_002330175.1| predicted protein [Populus trichocarpa] gi|1...   324   2e-86
ref|NP_001147741.1| ligatin [Zea mays] gi|195613408|gb|ACG28534....   323   2e-86
ref|XP_002457755.1| hypothetical protein SORBIDRAFT_03g012920 [S...   322   9e-86

>ref|XP_002319503.1| predicted protein [Populus trichocarpa] gi|118483047|gb|ABK93433.1|
           unknown [Populus trichocarpa]
           gi|222857879|gb|EEE95426.1| predicted protein [Populus
           trichocarpa]
          Length = 181

 Score =  326 bits (835), Expect = 5e-87
 Identities = 160/181 (88%), Positives = 168/181 (92%)
 Frame = +3

Query: 33  MFKKFSSEEISGQNQVKASVQRKIRQSIAEEYPGLEPVLEDLLPKKSPLIVAKCQNHXXX 212
           MFKKFSS+E+S QNQVKASVQRKIRQSIA+EYPGLEPVL+DLLPKKSPLIV KCQNH   
Sbjct: 1   MFKKFSSDEVSSQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVVKCQNHLNL 60

Query: 213 XXXXXXPLFFNIRDGPYMPTLRLLHQYPDIMKKLRVDRGAIKFVLAGANIMCPGLTSPGG 392
                 PLFFNIRDGPYMPTLRLLHQYP+IMKKL+VDRGAIKFVL+GANIMCPGLTSPGG
Sbjct: 61  VVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLSGANIMCPGLTSPGG 120

Query: 393 ALDDEVLEETPVAIMAEGKQHALAIGFTKMSAKDIKTINKGIGVDNMHYLNDGLWKMERM 572
           ALDDEV  ETPVAIMAEGKQHALAIGFTKMSAKDIKTINKGIGVDNMHYLNDGLWKMER+
Sbjct: 121 ALDDEVDAETPVAIMAEGKQHALAIGFTKMSAKDIKTINKGIGVDNMHYLNDGLWKMERL 180

Query: 573 D 575
           D
Sbjct: 181 D 181


>emb|CBI39540.3| unnamed protein product [Vitis vinifera]
          Length = 181

 Score =  324 bits (831), Expect = 1e-86
 Identities = 157/181 (86%), Positives = 168/181 (92%)
 Frame = +3

Query: 33  MFKKFSSEEISGQNQVKASVQRKIRQSIAEEYPGLEPVLEDLLPKKSPLIVAKCQNHXXX 212
           MFKKFSSE++S QNQVKASVQRKIRQSIA+EYPGLEPVL+DLLPKKSPLIVAKCQNH   
Sbjct: 1   MFKKFSSEDVSSQNQVKASVQRKIRQSIADEYPGLEPVLDDLLPKKSPLIVAKCQNHLNL 60

Query: 213 XXXXXXPLFFNIRDGPYMPTLRLLHQYPDIMKKLRVDRGAIKFVLAGANIMCPGLTSPGG 392
                 PLFFN+RDGPYMPTLRLLHQYP+IMKKL+VDRGAIKFVLAGANIMCPGLTSPGG
Sbjct: 61  VLVNNVPLFFNVRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGG 120

Query: 393 ALDDEVLEETPVAIMAEGKQHALAIGFTKMSAKDIKTINKGIGVDNMHYLNDGLWKMERM 572
            LDD+V EE+PVAIMAEGKQHALAIGFTKMSAKDI+ INKGIGVDNMHYLNDGLWKMER+
Sbjct: 121 VLDDDVAEESPVAIMAEGKQHALAIGFTKMSAKDIRAINKGIGVDNMHYLNDGLWKMERL 180

Query: 573 D 575
           D
Sbjct: 181 D 181


>ref|XP_002330175.1| predicted protein [Populus trichocarpa] gi|118484569|gb|ABK94158.1|
           unknown [Populus trichocarpa]
           gi|222871631|gb|EEF08762.1| predicted protein [Populus
           trichocarpa]
          Length = 181

 Score =  324 bits (830), Expect = 2e-86
 Identities = 159/181 (87%), Positives = 167/181 (92%)
 Frame = +3

Query: 33  MFKKFSSEEISGQNQVKASVQRKIRQSIAEEYPGLEPVLEDLLPKKSPLIVAKCQNHXXX 212
           MFKKFSS+E+S QNQVKASVQRKIRQSIA+EYPGLEPVL+D LPKKSPLIV KCQNH   
Sbjct: 1   MFKKFSSDEVSSQNQVKASVQRKIRQSIADEYPGLEPVLDDFLPKKSPLIVVKCQNHLNL 60

Query: 213 XXXXXXPLFFNIRDGPYMPTLRLLHQYPDIMKKLRVDRGAIKFVLAGANIMCPGLTSPGG 392
                 PLFFNIRDGPYMPTLRLLHQYP+IMKKL+VDRGAIKFVLAGANIMCPGLTSPGG
Sbjct: 61  VVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKLQVDRGAIKFVLAGANIMCPGLTSPGG 120

Query: 393 ALDDEVLEETPVAIMAEGKQHALAIGFTKMSAKDIKTINKGIGVDNMHYLNDGLWKMERM 572
           ALDDEV  ETPVAIMAEGKQHALAIGFTKMSAKDIK+INKGIGVDNMHYLNDGLWKMER+
Sbjct: 121 ALDDEVDAETPVAIMAEGKQHALAIGFTKMSAKDIKSINKGIGVDNMHYLNDGLWKMERL 180

Query: 573 D 575
           D
Sbjct: 181 D 181


>ref|NP_001147741.1| ligatin [Zea mays] gi|195613408|gb|ACG28534.1| ligatin [Zea mays]
           gi|223945305|gb|ACN26736.1| unknown [Zea mays]
           gi|413947931|gb|AFW80580.1| ligatin [Zea mays]
          Length = 181

 Score =  323 bits (829), Expect = 2e-86
 Identities = 157/181 (86%), Positives = 168/181 (92%)
 Frame = +3

Query: 33  MFKKFSSEEISGQNQVKASVQRKIRQSIAEEYPGLEPVLEDLLPKKSPLIVAKCQNHXXX 212
           MFKKFSSE+ISGQNQVKASVQRKIRQSIA+EYP LEP+L+DLLPKKSP+IV KCQNH   
Sbjct: 1   MFKKFSSEDISGQNQVKASVQRKIRQSIADEYPSLEPLLDDLLPKKSPMIVVKCQNHLNL 60

Query: 213 XXXXXXPLFFNIRDGPYMPTLRLLHQYPDIMKKLRVDRGAIKFVLAGANIMCPGLTSPGG 392
                 PLFFNIRDGPYMPTLRLLHQYPDIMKK +VDRGAIKFVL+GANIMCPGLTSPGG
Sbjct: 61  VVVNNVPLFFNIRDGPYMPTLRLLHQYPDIMKKFQVDRGAIKFVLSGANIMCPGLTSPGG 120

Query: 393 ALDDEVLEETPVAIMAEGKQHALAIGFTKMSAKDIKTINKGIGVDNMHYLNDGLWKMERM 572
           ALDDEV EETPVAIMAEGKQHALAIG+TKMSAKDI+TINKGIGVDNMHYLNDGLWKMER+
Sbjct: 121 ALDDEVEEETPVAIMAEGKQHALAIGYTKMSAKDIRTINKGIGVDNMHYLNDGLWKMERL 180

Query: 573 D 575
           +
Sbjct: 181 E 181


>ref|XP_002457755.1| hypothetical protein SORBIDRAFT_03g012920 [Sorghum bicolor]
           gi|241929730|gb|EES02875.1| hypothetical protein
           SORBIDRAFT_03g012920 [Sorghum bicolor]
          Length = 181

 Score =  322 bits (824), Expect = 9e-86
 Identities = 156/181 (86%), Positives = 168/181 (92%)
 Frame = +3

Query: 33  MFKKFSSEEISGQNQVKASVQRKIRQSIAEEYPGLEPVLEDLLPKKSPLIVAKCQNHXXX 212
           MFKKFSSE+ISGQNQVKASVQRKIRQSIA+EYP LEP+L+DLLPKKSP+IV KCQNH   
Sbjct: 1   MFKKFSSEDISGQNQVKASVQRKIRQSIADEYPSLEPLLDDLLPKKSPMIVVKCQNHLNL 60

Query: 213 XXXXXXPLFFNIRDGPYMPTLRLLHQYPDIMKKLRVDRGAIKFVLAGANIMCPGLTSPGG 392
                 PLFFNIRDGPYMPTLRLLHQYP+IMKK +VDRGAIKFVL+GANIMCPGLTSPGG
Sbjct: 61  VVVNNVPLFFNIRDGPYMPTLRLLHQYPNIMKKFQVDRGAIKFVLSGANIMCPGLTSPGG 120

Query: 393 ALDDEVLEETPVAIMAEGKQHALAIGFTKMSAKDIKTINKGIGVDNMHYLNDGLWKMERM 572
           ALDDEV EETPVAIMAEGKQHALAIG+TKMSAKDI+TINKGIGVDNMHYLNDGLWKMER+
Sbjct: 121 ALDDEVEEETPVAIMAEGKQHALAIGYTKMSAKDIRTINKGIGVDNMHYLNDGLWKMERL 180

Query: 573 D 575
           +
Sbjct: 181 E 181


Top