BLASTX nr result

ID: Coptis24_contig00007380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007380
         (1380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81438.1| hypothetical protein VITISV_014972 [Vitis vinifera]    59   2e-06
emb|CAN81970.1| hypothetical protein VITISV_017457 [Vitis vinifera]    58   5e-06
emb|CAN70257.1| hypothetical protein VITISV_024386 [Vitis vinifera]    58   7e-06

>emb|CAN81438.1| hypothetical protein VITISV_014972 [Vitis vinifera]
          Length = 395

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 28/69 (40%), Positives = 41/69 (59%)
 Frame = +1

Query: 1174 PLAAVVRSTEVPRRFTQPRFDRFDGKGDPVHHIQHFRQQLALWQEDKFNGLWCMLFPASL 1353
            P ++ +   E PR F  P+F  +DG  DP +HI H+RQ + L  E   + L C +FPA+L
Sbjct: 5    PFSSHIIDYEPPREFIVPKFSAYDGSSDPFNHIMHYRQLMTL--EIGNDMLLCKVFPANL 62

Query: 1354 KDGASDWFY 1380
            +D A  WF+
Sbjct: 63   QDQALSWFH 71


>emb|CAN81970.1| hypothetical protein VITISV_017457 [Vitis vinifera]
          Length = 986

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 28/82 (34%), Positives = 46/82 (56%)
 Frame = +1

Query: 1135 GTANQVIAALSHNPLAAVVRSTEVPRRFTQPRFDRFDGKGDPVHHIQHFRQQLALWQEDK 1314
            G+ ++ +  +   P ++++   E PR F  P+F  +DG  DP  HI H+RQ + L  +  
Sbjct: 394  GSISRCLDDMLSTPFSSLIIKYEPPRGFIVPKFSTYDGSSDPFDHIMHYRQLMTL--DIG 451

Query: 1315 FNGLWCMLFPASLKDGASDWFY 1380
             + L C +FPASL+  A  WF+
Sbjct: 452  NDMLLCKVFPASLQGQALSWFH 473


>emb|CAN70257.1| hypothetical protein VITISV_024386 [Vitis vinifera]
          Length = 1032

 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 29/82 (35%), Positives = 43/82 (52%)
 Frame = +1

Query: 1135 GTANQVIAALSHNPLAAVVRSTEVPRRFTQPRFDRFDGKGDPVHHIQHFRQQLALWQEDK 1314
            G+ N+ +  +   P    +   E PR F  P+F  +DG  DP  HI H+RQ + L   + 
Sbjct: 560  GSINKRLDDMLSTPFCYHIIHYEPPRGFLVPKFSTYDGSSDPFDHIMHYRQLMTLDMGN- 618

Query: 1315 FNGLWCMLFPASLKDGASDWFY 1380
             + L C +FPASL+  A  WF+
Sbjct: 619  -DALLCKIFPASLQGQALSWFH 639


Top