BLASTX nr result

ID: Coptis24_contig00007376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007376
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arab...   125   3e-27
ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana] ...   125   5e-27
ref|XP_003525565.1| PREDICTED: uncharacterized protein LOC100814...   124   1e-26
ref|XP_002870114.1| hypothetical protein ARALYDRAFT_493150 [Arab...   121   5e-26
ref|XP_003550904.1| PREDICTED: uncharacterized protein LOC100794...   121   7e-26

>ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arabidopsis lyrata subsp.
           lyrata] gi|297309169|gb|EFH39593.1| hypothetical protein
           ARALYDRAFT_494215 [Arabidopsis lyrata subsp. lyrata]
          Length = 748

 Score =  125 bits (315), Expect = 3e-27
 Identities = 61/129 (47%), Positives = 82/129 (63%)
 Frame = -1

Query: 388 VDTGKYASPVPFVGLYTAAATLVCLILILCDLGNGFRRRKSWFPCGYFXXXXXXXXXXXX 209
           ++  +++ P+P +G+Y A A+L+C + +  DL +GFR RK WFPC +F            
Sbjct: 12  LNDAEFSKPLPLIGIYVAVASLICGLAMAADLIHGFRHRKFWFPCKFFSLNATSLTFIAV 71

Query: 208 XSKLPVDLTTPMPSAQDQLSKLTGTVFICMSMGFLMPSLGIFGEIESYSNLVALSIFVVT 29
             KL VDL T MPS QDQL+KL+ TVF+C  MG  MPSLGI    +   NL+AL I V+T
Sbjct: 72  GIKLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLGIMDNNDLLMNLMALGILVIT 131

Query: 28  VVVNICIQM 2
            VVNICIQ+
Sbjct: 132 DVVNICIQL 140


>ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758786|dbj|BAB09084.1| unnamed protein product
           [Arabidopsis thaliana] gi|16974605|gb|AAL31205.1|
           AT5g47580/MNJ7_17 [Arabidopsis thaliana]
           gi|23506171|gb|AAN31097.1| At5g47580/MNJ7_17
           [Arabidopsis thaliana] gi|332008151|gb|AED95534.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 748

 Score =  125 bits (313), Expect = 5e-27
 Identities = 61/129 (47%), Positives = 82/129 (63%)
 Frame = -1

Query: 388 VDTGKYASPVPFVGLYTAAATLVCLILILCDLGNGFRRRKSWFPCGYFXXXXXXXXXXXX 209
           ++  +++ P+P +G+Y A A+L+C + +  DL +GFR RK WFPC +F            
Sbjct: 12  LNDAEFSKPLPSIGIYVAVASLICGLAMAADLIHGFRHRKFWFPCKFFSLNATSLTFIAV 71

Query: 208 XSKLPVDLTTPMPSAQDQLSKLTGTVFICMSMGFLMPSLGIFGEIESYSNLVALSIFVVT 29
             KL VDL T MPS QDQL+KL+ TVF+C  MG  MPSLGI    +   NL+AL I V+T
Sbjct: 72  GIKLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLGIMDNNDLLMNLMALGILVIT 131

Query: 28  VVVNICIQM 2
            VVNICIQ+
Sbjct: 132 DVVNICIQL 140


>ref|XP_003525565.1| PREDICTED: uncharacterized protein LOC100814359 [Glycine max]
          Length = 759

 Score =  124 bits (310), Expect = 1e-26
 Identities = 60/134 (44%), Positives = 84/134 (62%)
 Frame = -1

Query: 406 CLNGTMVDTGKYASPVPFVGLYTAAATLVCLILILCDLGNGFRRRKSWFPCGYFXXXXXX 227
           C +   +D  K++ P+P++G+Y AAA+L CLI +  DL +G R RK WFPC +F      
Sbjct: 6   CSSDGQMDDTKFSKPMPWIGIYIAAASLACLITMAADLIHGIRGRKLWFPCKFFCLNATS 65

Query: 226 XXXXXXXSKLPVDLTTPMPSAQDQLSKLTGTVFICMSMGFLMPSLGIFGEIESYSNLVAL 47
                   KL VDL TPMP  +DQLSKL+ +  IC  M   MP+LGI    ++  NL+A+
Sbjct: 66  LAIIAVAVKLSVDLNTPMPHRRDQLSKLSSSALICTIMANSMPTLGITENKDTMMNLMAM 125

Query: 46  SIFVVTVVVNICIQ 5
           +I V+T++VNICIQ
Sbjct: 126 AILVITMIVNICIQ 139


>ref|XP_002870114.1| hypothetical protein ARALYDRAFT_493150 [Arabidopsis lyrata subsp.
           lyrata] gi|297315950|gb|EFH46373.1| hypothetical protein
           ARALYDRAFT_493150 [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score =  121 bits (304), Expect = 5e-26
 Identities = 61/133 (45%), Positives = 84/133 (63%)
 Frame = -1

Query: 400 NGTMVDTGKYASPVPFVGLYTAAATLVCLILILCDLGNGFRRRKSWFPCGYFXXXXXXXX 221
           +G + DT +++ P+P +G+Y AAA+++C + +  DL +G R RK WFPC +F        
Sbjct: 6   HGNLSDT-EFSKPLPSIGVYVAAASVICGVAMFSDLLHGLRHRKFWFPCKFFSLNATTLT 64

Query: 220 XXXXXSKLPVDLTTPMPSAQDQLSKLTGTVFICMSMGFLMPSLGIFGEIESYSNLVALSI 41
                 KL +DL TPMPS QDQL+KL+ +VF+C  M   MPSLG     +   NLVAL I
Sbjct: 65  FISVCVKLSLDLNTPMPSRQDQLAKLSSSVFVCTVMANSMPSLGFMVTQDLLMNLVALGI 124

Query: 40  FVVTVVVNICIQM 2
            V+T VVNICIQ+
Sbjct: 125 LVITDVVNICIQL 137


>ref|XP_003550904.1| PREDICTED: uncharacterized protein LOC100794740 [Glycine max]
          Length = 760

 Score =  121 bits (303), Expect = 7e-26
 Identities = 59/134 (44%), Positives = 82/134 (61%)
 Frame = -1

Query: 406 CLNGTMVDTGKYASPVPFVGLYTAAATLVCLILILCDLGNGFRRRKSWFPCGYFXXXXXX 227
           C +   +D  K++ P+P++G+Y AAA+L CLI +  DL +G R RK WFPC +F      
Sbjct: 6   CSSDGHMDDTKFSKPMPWIGIYIAAASLACLIAMAADLIHGIRGRKLWFPCKFFCLNATS 65

Query: 226 XXXXXXXSKLPVDLTTPMPSAQDQLSKLTGTVFICMSMGFLMPSLGIFGEIESYSNLVAL 47
                   KL VDL TPMP   DQLSKL+ +  IC  M   MP+LGI    ++  N +A+
Sbjct: 66  LAIIAVAVKLSVDLNTPMPHRHDQLSKLSSSALICTIMANSMPTLGITENKDTMMNFMAM 125

Query: 46  SIFVVTVVVNICIQ 5
           +I V+T++VNICIQ
Sbjct: 126 AILVITMIVNICIQ 139


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