BLASTX nr result

ID: Coptis24_contig00007373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007373
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69430.1| hypothetical protein VITISV_024658 [Vitis vinifera]    60   5e-07
emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]    59   1e-06
emb|CAN77850.1| hypothetical protein VITISV_020834 [Vitis vinifera]    59   1e-06
emb|CAN64220.1| hypothetical protein VITISV_014001 [Vitis vinifera]    58   1e-06
ref|XP_002273413.2| PREDICTED: TMV resistance protein N-like [Vi...    58   2e-06

>emb|CAN69430.1| hypothetical protein VITISV_024658 [Vitis vinifera]
          Length = 1998

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 28/95 (29%), Positives = 47/95 (49%)
 Frame = +1

Query: 343 MELSTIEEVERLLKAPRIEYQQAKLSLRRWRPASETIDPSWLHKRKRWIEFLGIPLHLWS 522
           +E    +E ER+L      ++     L +W+P+   +       R  W++ LG+PLHLW 
Sbjct: 353 LEFEFADEAERVLNLGEKSFRGRSFHLEKWKPSVGCLKEDNGDSRLVWVKILGLPLHLWG 412

Query: 523 VEVFRKLCSSFGRFYKVKEEIGDYRKVSRIKILVE 627
             +F++   S GRF  V E   + R +   +IL+E
Sbjct: 413 RNLFKRFGDSCGRFVXVDENTAERRNLKWARILIE 447


>emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]
          Length = 4128

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 28/105 (26%), Positives = 51/105 (48%)
 Frame = +1

Query: 313  LTCVNSRKAMMELSTIEEVERLLKAPRIEYQQAKLSLRRWRPASETIDPSWLHKRKRWIE 492
            L+ V     ++E    +E ER+  +    ++     L +W+P+   ++      R  W+ 
Sbjct: 1876 LSNVRENLMLLEFEFEDEAERVFSSGIRSFRGRSFRLEKWKPSVGCLEGDNEETRHVWVR 1935

Query: 493  FLGIPLHLWSVEVFRKLCSSFGRFYKVKEEIGDYRKVSRIKILVE 627
             LG+PLHLW   +F++   + GR+  V E   + R +   K+LVE
Sbjct: 1936 ILGLPLHLWGRSLFKQFGDACGRYVAVDENTAERRNLKWAKVLVE 1980


>emb|CAN77850.1| hypothetical protein VITISV_020834 [Vitis vinifera]
          Length = 1905

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 28/105 (26%), Positives = 51/105 (48%)
 Frame = +1

Query: 313 LTCVNSRKAMMELSTIEEVERLLKAPRIEYQQAKLSLRRWRPASETIDPSWLHKRKRWIE 492
           L+ V     ++E    +E ER+  +    ++     L +W+P+   ++      R  W+ 
Sbjct: 227 LSNVRENLMLLEFEFEDEAERVFSSXARRFRGRSFRLEKWKPSVGCLEGVNEETRHVWVR 286

Query: 493 FLGIPLHLWSVEVFRKLCSSFGRFYKVKEEIGDYRKVSRIKILVE 627
            LG+PLHLW   +F++   S GR+  V E   + R +   ++LVE
Sbjct: 287 ILGLPLHLWGRXLFKQFGDSCGRYXAVDENTAERRNLKWARVLVE 331


>emb|CAN64220.1| hypothetical protein VITISV_014001 [Vitis vinifera]
          Length = 1937

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/96 (29%), Positives = 49/96 (51%)
 Frame = +1

Query: 340 MMELSTIEEVERLLKAPRIEYQQAKLSLRRWRPASETIDPSWLHKRKRWIEFLGIPLHLW 519
           ++E    +E ER+  +    ++    SL +W+P+   ++      R  W+  LG+PLHLW
Sbjct: 236 LLEFEFEDEAERVFNSGSRCFRGRSFSLEKWKPSVGCLEGVRGDVRHVWVRILGLPLHLW 295

Query: 520 SVEVFRKLCSSFGRFYKVKEEIGDYRKVSRIKILVE 627
              +F+K   + G+F  V E   D R +   ++LVE
Sbjct: 296 DRSLFKKFGDACGKFVXVDEYTADRRNLKWARVLVE 331


>ref|XP_002273413.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1640

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
 Frame = +1

Query: 313  LTCVNSRKAMMELSTIEEVERLLKAPRIEYQQAKLSLRRWRPASETIDPSWLHKRKR--- 483
            L  +N RKA++E   +EE  R++ +    ++  ++ L  W P S      W    +R   
Sbjct: 1350 LAKLNKRKALLEFEDLEEARRVVSSGSCAWEGTQVRLEHWSPRSGC----WAEGEERRDV 1405

Query: 484  WIEFLGIPLHLWSVEVFRKLCSSFGRFYKVKEEIGDYRKVSRIKILVE 627
            W+  +G+P+ LWS E+ R++  + G F    E     R +   +ILV+
Sbjct: 1406 WVRIVGLPISLWSPEILRRVGDACGGFITADENTRSIRDLQWARILVK 1453


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