BLASTX nr result
ID: Coptis24_contig00007356
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00007356
(2198 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 903 0.0
ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 897 0.0
ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 897 0.0
ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl... 894 0.0
ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 893 0.0
>ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
Length = 871
Score = 903 bits (2334), Expect = 0.0
Identities = 455/536 (84%), Positives = 480/536 (89%)
Frame = +1
Query: 283 NDSVAKAGKTGGAYIPPFKLAQMMKGVEDKSSIEYQRLTWDALRKSINGLVNKVNAANIK 462
N + GK+GG YIPPFK+A MMK V+DKSS+EYQRLTWDALRKSINGLVNKVNA NIK
Sbjct: 291 NGDASNLGKSGGVYIPPFKMAMMMKEVQDKSSVEYQRLTWDALRKSINGLVNKVNATNIK 350
Query: 463 NIVPELFEENMIRGRGLFCRSCMKSQMASSRFTDVFSALVAVVNTKFPEVGELLLRRIVL 642
NI+PELF EN+IRGRGLFCRSCMKSQMAS FTDVF+ALVAVVNTKFPEVG+LLLRRIVL
Sbjct: 351 NIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVL 410
Query: 643 QLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPSDDSVEVAVGFVTE 822
QLKRAYKRNDKPQLLAAVKFIAHLVNQQ AHEIIALELLTVLLE P+DDSVEVAVGFVTE
Sbjct: 411 QLKRAYKRNDKPQLLAAVKFIAHLVNQQAAHEIIALELLTVLLEKPTDDSVEVAVGFVTE 470
Query: 823 CGSLLQDLSPKALHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDL 1002
CGS+LQDLSPK LHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDL
Sbjct: 471 CGSILQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDL 530
Query: 1003 VDQEDQLTHELSLEDEIDPETSLDIFKADPLFLENEKRYEVLKKSILGXXXXXXXXXXXX 1182
V+QEDQ+THE+SL++EIDPE SLDIFK DP FLENEKRYE LKKS+LG
Sbjct: 531 VEQEDQITHEVSLDEEIDPEISLDIFKPDPNFLENEKRYEELKKSMLGEESEDDEEGLDS 590
Query: 1183 XXXXXXXXXXXXXXXXXXQMKIKDETETDLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLE 1362
QM+IKDETET+LVNLRRTIYLTIMSSVDFEEAGHKLLKIKLE
Sbjct: 591 ESDDDDDEDDESDEEEEEQMQIKDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLE 650
Query: 1363 PGQEMELCIMLLECCSQERTYLRYYGLLGQRFCNINKIHQENFETCFVKQYSSIHQLETN 1542
PGQEMELCIMLLECCSQERTYLRYYGLLGQRFC INK+HQENFE CFV+QYS IH+LETN
Sbjct: 651 PGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETN 710
Query: 1543 KLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNER 1722
KLRNV KFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNER
Sbjct: 711 KLRNVGKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNER 770
Query: 1723 LTDPQMQESFDSIFPKDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQK 1890
L DP MQESF+SIFPKDNPKNTRF INFFTSIGLGG+TENLREYLKNMPRLIMQQ+
Sbjct: 771 LNDPTMQESFESIFPKDNPKNTRFCINFFTSIGLGGLTENLREYLKNMPRLIMQQQ 826
>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
Length = 797
Score = 897 bits (2318), Expect = 0.0
Identities = 453/538 (84%), Positives = 486/538 (90%), Gaps = 2/538 (0%)
Frame = +1
Query: 283 NDSVAKAGKTGGAYIPPFKLAQMMKGVEDKSSIEYQRLTWDALRKSINGLVNKVNAANIK 462
N + GK+GG YIPPFKLA+MMK V+DKSSIEYQRLTWDALRKSINGLVNKVNA NIK
Sbjct: 212 NPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNIK 271
Query: 463 NIVPELFEENMIRGRGLFCRSCMKSQMASSRFTDVFSALVAVVNTKFPEVGELLLRRIVL 642
NI+PELF EN+IRGRGLFCRSCMKSQMAS FTDVF+ALVAVVNTKFPEVG+LLLRRIVL
Sbjct: 272 NIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVL 331
Query: 643 QLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPSDDSVEVAVGFVTE 822
QLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENP+DDSVEVAVGFVTE
Sbjct: 332 QLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTE 391
Query: 823 CGSLLQDLSPKALHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDL 1002
CGS+L+DLSPK LHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKF+GYPAVRPELDL
Sbjct: 392 CGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPAVRPELDL 451
Query: 1003 VDQEDQLTHELSLEDEIDPETSLDIFKADPLFLENEKRYEVLKKSILG--XXXXXXXXXX 1176
V+QEDQLTHE+SL++EIDPE +LDIFK+DP FLENEKRYE LKK+ILG
Sbjct: 452 VEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENEKRYEDLKKNILGEESEDEEDRSDA 511
Query: 1177 XXXXXXXXXXXXXXXXXXXXQMKIKDETETDLVNLRRTIYLTIMSSVDFEEAGHKLLKIK 1356
QM+I DETET+LVNLRRTIYLTIMSSVDFEEAGHKLLKIK
Sbjct: 512 GSDESEDEDEEDESEEEDEEQMQINDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIK 571
Query: 1357 LEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCNINKIHQENFETCFVKQYSSIHQLE 1536
LEPGQE+ELC+MLLECCSQERTYLRYYGLLGQRFC INK++QENF+ CFV+QYS IH+LE
Sbjct: 572 LEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFDKCFVQQYSMIHRLE 631
Query: 1537 TNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLN 1716
TNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLN
Sbjct: 632 TNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLN 691
Query: 1717 ERLTDPQMQESFDSIFPKDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQK 1890
ERLTDP MQ+SF+SIFP+DNPKNTRFSINFFTSIGLGG+TENLREYLKNMPRLIMQQ+
Sbjct: 692 ERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYLKNMPRLIMQQQ 749
>ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
Length = 860
Score = 897 bits (2318), Expect = 0.0
Identities = 455/536 (84%), Positives = 481/536 (89%)
Frame = +1
Query: 283 NDSVAKAGKTGGAYIPPFKLAQMMKGVEDKSSIEYQRLTWDALRKSINGLVNKVNAANIK 462
N V+ GK+GG YIPPFK+A MMK V+DKSS+EYQRLTWDALRKSINGLVNKVNA NIK
Sbjct: 275 NGDVSNLGKSGGVYIPPFKMAMMMKEVQDKSSVEYQRLTWDALRKSINGLVNKVNATNIK 334
Query: 463 NIVPELFEENMIRGRGLFCRSCMKSQMASSRFTDVFSALVAVVNTKFPEVGELLLRRIVL 642
NI+PELF EN+IRGRGLFCRSCMKSQMAS FTDVF+ALVAVVNTKFPEVG+LLLRRIVL
Sbjct: 335 NIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVL 394
Query: 643 QLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPSDDSVEVAVGFVTE 822
QLKRAYKRNDKPQLLAAVKFIAHLVNQQ AHEIIALELLTVLLE P+DDSVEVAVGFVTE
Sbjct: 395 QLKRAYKRNDKPQLLAAVKFIAHLVNQQAAHEIIALELLTVLLEKPTDDSVEVAVGFVTE 454
Query: 823 CGSLLQDLSPKALHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDL 1002
CGS+LQDLSPK LHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDL
Sbjct: 455 CGSILQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDL 514
Query: 1003 VDQEDQLTHELSLEDEIDPETSLDIFKADPLFLENEKRYEVLKKSILGXXXXXXXXXXXX 1182
V+QEDQ+THE+SL++EIDPE SLDIFK DP FLENEKRYE LKKS+LG
Sbjct: 515 VEQEDQITHEVSLDEEIDPEISLDIFKPDPNFLENEKRYEELKKSMLG-EESEDDEEGLD 573
Query: 1183 XXXXXXXXXXXXXXXXXXQMKIKDETETDLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLE 1362
+M+IKDETET+LVNLRRTIYLTIMSSVDFEEAGHKLLKIKLE
Sbjct: 574 AESDDDDEDDDSDEEDEEEMQIKDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLE 633
Query: 1363 PGQEMELCIMLLECCSQERTYLRYYGLLGQRFCNINKIHQENFETCFVKQYSSIHQLETN 1542
PGQEMELCIMLLECCSQERTYLRYYGLLGQRFC INK+HQENFE CFV+QYS IH+LETN
Sbjct: 634 PGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETN 693
Query: 1543 KLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNER 1722
KLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNER
Sbjct: 694 KLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNER 753
Query: 1723 LTDPQMQESFDSIFPKDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQK 1890
L D MQESF+SIFPKDNPKNTRF INFFTSIGLGG+TENLREYLKNMPRLIMQQ+
Sbjct: 754 LNDLTMQESFESIFPKDNPKNTRFCINFFTSIGLGGLTENLREYLKNMPRLIMQQQ 809
>ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22
homolog, partial [Cucumis sativus]
Length = 780
Score = 894 bits (2311), Expect = 0.0
Identities = 452/538 (84%), Positives = 484/538 (89%), Gaps = 2/538 (0%)
Frame = +1
Query: 283 NDSVAKAGKTGGAYIPPFKLAQMMKGVEDKSSIEYQRLTWDALRKSINGLVNKVNAANIK 462
N + GK+GG YIPPFKLA+MMK V+DKSSIEYQRLTWDALRKSINGLVNKVNA NIK
Sbjct: 212 NPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNIK 271
Query: 463 NIVPELFEENMIRGRGLFCRSCMKSQMASSRFTDVFSALVAVVNTKFPEVGELLLRRIVL 642
NI+PELF EN+IRGRGLFCRSCMKSQMAS FTDVF+ALVAVVNTKFPEVG+LLLRRIVL
Sbjct: 272 NIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVL 331
Query: 643 QLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPSDDSVEVAVGFVTE 822
QLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENP+DDSVEVAVGFVTE
Sbjct: 332 QLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPTDDSVEVAVGFVTE 391
Query: 823 CGSLLQDLSPKALHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDL 1002
CGS+L+DLSPK LHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKF+GYPAVRPELDL
Sbjct: 392 CGSILKDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFEGYPAVRPELDL 451
Query: 1003 VDQEDQLTHELSLEDEIDPETSLDIFKADPLFLENEKRYEVLKKSILG--XXXXXXXXXX 1176
V+QEDQLTHE+SL++EIDPE +LDIFK+DP FLENEKRYE LKK ILG
Sbjct: 452 VEQEDQLTHEISLQEEIDPEITLDIFKSDPNFLENEKRYEDLKKXILGEESEDEEDRSDA 511
Query: 1177 XXXXXXXXXXXXXXXXXXXXQMKIKDETETDLVNLRRTIYLTIMSSVDFEEAGHKLLKIK 1356
QM+I DETET+LVNLRRTIYLTIMSSVDFEEAGHKLLKIK
Sbjct: 512 GSDESEDEDEEDESEEEDEEQMQINDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIK 571
Query: 1357 LEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCNINKIHQENFETCFVKQYSSIHQLE 1536
LEPGQE+ELC+MLLECCSQERTYLRYYGLLGQRFC INK++QENF+ CFV+QYS IH+LE
Sbjct: 572 LEPGQEIELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFDKCFVQQYSMIHRLE 631
Query: 1537 TNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLN 1716
TNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLN
Sbjct: 632 TNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLN 691
Query: 1717 ERLTDPQMQESFDSIFPKDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQK 1890
ERLTDP MQ+SF+SIFP+DNPKNTRFSINFFTSIGLGG+TENLREY KNMPRLIMQQ+
Sbjct: 692 ERLTDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGLTENLREYXKNMPRLIMQQQ 749
>ref|XP_002265479.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Vitis vinifera]
Length = 785
Score = 893 bits (2308), Expect = 0.0
Identities = 454/542 (83%), Positives = 483/542 (89%), Gaps = 6/542 (1%)
Frame = +1
Query: 283 NDSVAKAGKTGGAYIPPFKLAQMMKGVEDKSSIEYQRLTWDALRKSINGLVNKVNAANIK 462
N V+ G++GG YIPPFKLAQMMK V+DKSSIEYQRLTWDALRKSINGLVNKVNA NIK
Sbjct: 195 NADVSNWGRSGGVYIPPFKLAQMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATNIK 254
Query: 463 NIVPELFEENMIRGRGLFCRSCMKSQMASSRFTDVFSALVAVVNTKFPEVGELLLRRIVL 642
NI+PELF EN+IRGRGLFCRSCMKSQMAS FTDVF+ALVAVVNTKFPEVGELL+RRIVL
Sbjct: 255 NIIPELFGENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGELLMRRIVL 314
Query: 643 QLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTVLLENPSDDSVEVAVGFVTE 822
Q KRAYKRNDK QLLAAVKFIAHLVNQQVAHEIIALELL ++LENP+DDSVEVAVGFV E
Sbjct: 315 QFKRAYKRNDKHQLLAAVKFIAHLVNQQVAHEIIALELLALMLENPTDDSVEVAVGFVKE 374
Query: 823 CGSLLQDLSPKALHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDL 1002
CGS+LQDLSPK LHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQG+PAVRPELDL
Sbjct: 375 CGSILQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGHPAVRPELDL 434
Query: 1003 VDQEDQLTHELSLEDEIDPETSLDIFKADPLFLENEKRYEVLKKSILG------XXXXXX 1164
V+QEDQLTHE+SLE++IDPE +LDIFK DP FLE+EKRYE LKK+ILG
Sbjct: 435 VEQEDQLTHEISLEEKIDPEITLDIFKPDPQFLESEKRYEELKKTILGEESEDEAGSDAG 494
Query: 1165 XXXXXXXXXXXXXXXXXXXXXXXXQMKIKDETETDLVNLRRTIYLTIMSSVDFEEAGHKL 1344
QMKIKDETET+LVNLRRTIYLTIMSS+DFEEAGHKL
Sbjct: 495 SDDEDEDEDDDEDDDEDDDEEDEQQMKIKDETETNLVNLRRTIYLTIMSSIDFEEAGHKL 554
Query: 1345 LKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCNINKIHQENFETCFVKQYSSI 1524
LKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFC INK+HQENFE CFV+QYS I
Sbjct: 555 LKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQQYSMI 614
Query: 1525 HQLETNKLRNVAKFFAHLLGTDALPWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGI 1704
H+LETNKLRNVAKFFAHLLGTDALPWHVL+YIRLTEEDTTSSSRIFIKILFQELSEHLGI
Sbjct: 615 HRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGI 674
Query: 1705 RLLNERLTDPQMQESFDSIFPKDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQ 1884
RLLNERLTDP MQ+SF+SIFPKDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQ
Sbjct: 675 RLLNERLTDPSMQDSFESIFPKDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQ 734
Query: 1885 QK 1890
Q+
Sbjct: 735 QQ 736