BLASTX nr result

ID: Coptis24_contig00007354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007354
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264963.1| PREDICTED: auxin-induced protein AUX28 [Viti...   234   2e-59
emb|CAN72026.1| hypothetical protein VITISV_014421 [Vitis vinifera]   234   2e-59
ref|XP_002284133.1| PREDICTED: auxin-responsive protein IAA14-li...   223   6e-56
ref|XP_002520980.1| Auxin-induced protein AUX28, putative [Ricin...   220   3e-55
ref|XP_002302075.1| predicted protein [Populus trichocarpa] gi|2...   220   3e-55

>ref|XP_002264963.1| PREDICTED: auxin-induced protein AUX28 [Vitis vinifera]
           gi|313765827|gb|ADR80321.1| indole-3-acetic acid-induced
           protein 16 [Vitis vinifera]
          Length = 238

 Score =  234 bits (598), Expect = 2e-59
 Identities = 126/206 (61%), Positives = 147/206 (71%), Gaps = 3/206 (1%)
 Frame = -2

Query: 609 MTNMLGTEHDQYTMNFEETXXXXXXXXXXXXXXXXXXXXXXG---FAETIDLKLKLPAKD 439
           M +++  E D++ +N+EET                      G   F+ET+DLKL L +KD
Sbjct: 1   MASIVCAERDKFNLNYEETELRLGLGLPGGGGNDGDVSKTSGKRGFSETVDLKLNLLSKD 60

Query: 438 LEMDPSEKTKNLPKEKXXXXXXXXXXXXXXXAQVVGWPPVRSFRKNILSVQKSNTKEDTG 259
              D +EK K    EK               AQVVGWPPVRSFRKNIL+VQK++++E+  
Sbjct: 61  SVADQAEKMK----EKSALPPSNDPAKPPAKAQVVGWPPVRSFRKNILTVQKNSSEEEKA 116

Query: 258 MSSAAFVKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCGTQGMKDFMNESK 79
            SSAAFVKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCG+QGMKDFMNESK
Sbjct: 117 SSSAAFVKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESK 176

Query: 78  LMDLLNGTEYVPTYEDKDGDWMLVGD 1
           L+DLLNG++YVPTYEDKDGDWMLVGD
Sbjct: 177 LIDLLNGSDYVPTYEDKDGDWMLVGD 202


>emb|CAN72026.1| hypothetical protein VITISV_014421 [Vitis vinifera]
          Length = 285

 Score =  234 bits (598), Expect = 2e-59
 Identities = 126/206 (61%), Positives = 147/206 (71%), Gaps = 3/206 (1%)
 Frame = -2

Query: 609 MTNMLGTEHDQYTMNFEETXXXXXXXXXXXXXXXXXXXXXXG---FAETIDLKLKLPAKD 439
           M +++  E D++ +N+EET                      G   F+ET+DLKL L +KD
Sbjct: 1   MASIVCAERDKFNLNYEETELRLGLGLPGGGGNDGDVSKSSGKRGFSETVDLKLNLLSKD 60

Query: 438 LEMDPSEKTKNLPKEKXXXXXXXXXXXXXXXAQVVGWPPVRSFRKNILSVQKSNTKEDTG 259
              D +EK K    EK               AQVVGWPPVRSFRKNIL+VQK++++E+  
Sbjct: 61  SVADQAEKMK----EKSALPPSNDPAKPPAKAQVVGWPPVRSFRKNILTVQKNSSEEEKA 116

Query: 258 MSSAAFVKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCGTQGMKDFMNESK 79
            SSAAFVKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCG+QGMKDFMNESK
Sbjct: 117 SSSAAFVKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCGSQGMKDFMNESK 176

Query: 78  LMDLLNGTEYVPTYEDKDGDWMLVGD 1
           L+DLLNG++YVPTYEDKDGDWMLVGD
Sbjct: 177 LIDLLNGSDYVPTYEDKDGDWMLVGD 202


>ref|XP_002284133.1| PREDICTED: auxin-responsive protein IAA14-like isoform 1 [Vitis
           vinifera]
          Length = 243

 Score =  223 bits (567), Expect = 6e-56
 Identities = 123/210 (58%), Positives = 141/210 (67%), Gaps = 1/210 (0%)
 Frame = -2

Query: 627 MEVCRNMTNMLGTEHDQYTMNFEETXXXXXXXXXXXXXXXXXXXXXXG-FAETIDLKLKL 451
           MEV R M++MLG E      +F+ET                        F+ET+DLKL L
Sbjct: 1   MEVGRKMSSMLGAERG---FDFKETELCLGLPGGGGGEAETLKASGKRGFSETVDLKLNL 57

Query: 450 PAKDLEMDPSEKTKNLPKEKXXXXXXXXXXXXXXXAQVVGWPPVRSFRKNILSVQKSNTK 271
            +K+  +D +E  K  PKEK               AQVVGWPPVRSFRKNI++ + S+ +
Sbjct: 58  QSKESVVDLNENVKCPPKEKNLLPCTKDPAKPPAKAQVVGWPPVRSFRKNIMAQKNSSEE 117

Query: 270 EDTGMSSAAFVKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTIGNCGTQGMKDFM 91
            + G S AAFVKV MDGAPYLRKVDLKMYKSYQELSDALGKMFSSFT+GN G QGM DFM
Sbjct: 118 GEKGSSGAAFVKVCMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTMGNYGAQGMIDFM 177

Query: 90  NESKLMDLLNGTEYVPTYEDKDGDWMLVGD 1
           NESKLMDLLN +EYVPTYEDKDGDWMLVGD
Sbjct: 178 NESKLMDLLNSSEYVPTYEDKDGDWMLVGD 207


>ref|XP_002520980.1| Auxin-induced protein AUX28, putative [Ricinus communis]
           gi|223539817|gb|EEF41397.1| Auxin-induced protein AUX28,
           putative [Ricinus communis]
          Length = 244

 Score =  220 bits (561), Expect = 3e-55
 Identities = 110/162 (67%), Positives = 130/162 (80%), Gaps = 1/162 (0%)
 Frame = -2

Query: 483 FAETIDLKLKLPAKDLEMDPSEKTKNLPKEKXXXXXXXXXXXXXXXAQVVGWPPVRSFRK 304
           F+ET+DLKL L +K+  +DP++ TK + +E                 QVVGWPPVRSFRK
Sbjct: 48  FSETVDLKLNLSSKEPGIDPNDNTKTISRENNLLSADDPAKPPAKA-QVVGWPPVRSFRK 106

Query: 303 NILSVQKSNTKEDTGMS-SAAFVKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTI 127
           ++L+VQKS+ +E   +  +  FVKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTI
Sbjct: 107 HMLTVQKSSNEETEKLGLNPTFVKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTI 166

Query: 126 GNCGTQGMKDFMNESKLMDLLNGTEYVPTYEDKDGDWMLVGD 1
           GNCG+QGMKDF+NESKL+DLLNGT+YVPTYEDKDGDWMLVGD
Sbjct: 167 GNCGSQGMKDFLNESKLIDLLNGTDYVPTYEDKDGDWMLVGD 208


>ref|XP_002302075.1| predicted protein [Populus trichocarpa] gi|222843801|gb|EEE81348.1|
           predicted protein [Populus trichocarpa]
           gi|429326564|gb|AFZ78622.1| hypothetical protein
           [Populus tomentosa]
          Length = 237

 Score =  220 bits (561), Expect = 3e-55
 Identities = 113/165 (68%), Positives = 132/165 (80%), Gaps = 4/165 (2%)
 Frame = -2

Query: 483 FAETIDLKLKLPAKDLEMDPS-EKTKNLPKEKXXXXXXXXXXXXXXXAQVVGWPPVRSFR 307
           F+ET+DLKLKL +K+   DP+ EKT +L +EK                QVVGWPPVRSFR
Sbjct: 37  FSETVDLKLKLSSKESGADPNHEKTSSLQREKNLLATDPAKPPAKA--QVVGWPPVRSFR 94

Query: 306 KNILSVQKSNTKEDTGM---SSAAFVKVSMDGAPYLRKVDLKMYKSYQELSDALGKMFSS 136
           KN+L+VQKS+T ++       +A FVKVSMDGAPYLRKVDLKMYK+YQELSDALGKMFSS
Sbjct: 95  KNMLAVQKSSTDQECEKVPGGNATFVKVSMDGAPYLRKVDLKMYKTYQELSDALGKMFSS 154

Query: 135 FTIGNCGTQGMKDFMNESKLMDLLNGTEYVPTYEDKDGDWMLVGD 1
           FTIGNCG+ G+KDF+NESKL+DLLNGT+YVPTYEDKDGDWMLVGD
Sbjct: 155 FTIGNCGSHGLKDFLNESKLIDLLNGTDYVPTYEDKDGDWMLVGD 199


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