BLASTX nr result

ID: Coptis24_contig00007326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007326
         (1632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525972.1| nucleic acid binding protein, putative [Rici...   259   2e-66
ref|XP_002279557.2| PREDICTED: uncharacterized protein LOC100247...   250   9e-64
emb|CBI16864.3| unnamed protein product [Vitis vinifera]              250   9e-64
ref|XP_002277668.1| PREDICTED: 42 kDa peptidyl-prolyl isomerase ...   249   1e-63
ref|XP_002299936.1| predicted protein [Populus trichocarpa] gi|2...   247   7e-63

>ref|XP_002525972.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223534704|gb|EEF36396.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 693

 Score =  259 bits (661), Expect = 2e-66
 Identities = 124/184 (67%), Positives = 149/184 (80%), Gaps = 2/184 (1%)
 Frame = +3

Query: 1083 SGVKRARMTYVDQEPSVHVVYNSLTRASKRKLEELLQHWSKWHTQQNFSTNDPNEIMETG 1262
            SGVKRAR+ Y +Q+PSVHV YNSLTRASKRKLEELLQ WS+WH Q+  S+ D NE++E+G
Sbjct: 246  SGVKRARIAYNEQQPSVHVTYNSLTRASKRKLEELLQQWSEWHVQRGSSSQDLNEVLESG 305

Query: 1263 EQTFFPALHFGVENASTVSFWIDNQTSKEQNN-FIPLDGDSVPTYDRGYAFGLTSADSST 1439
            E+T+FPAL  G E +S VSFWI+NQT K+ NN  I  D DSVP YDRG+A GLTS D  +
Sbjct: 306  EETYFPALCVGTEKSSAVSFWIENQTKKQLNNDLISSDSDSVPLYDRGFAIGLTSTDGPS 365

Query: 1440 NVEGGVE-TQEVSRCFNCGSYSHSLKDCRKPRDNAAVDNARKEHQSKRNQTVGSRSTPRY 1616
            NVEGG+E   E +RCFNCGSYSH+LK+C KPR+NAAV+NARK+H+SKRNQ  GSR+  RY
Sbjct: 366  NVEGGLEIVNEAARCFNCGSYSHALKECPKPRNNAAVNNARKQHKSKRNQNAGSRNGTRY 425

Query: 1617 YQSS 1628
            YQSS
Sbjct: 426  YQSS 429


>ref|XP_002279557.2| PREDICTED: uncharacterized protein LOC100247996 [Vitis vinifera]
          Length = 575

 Score =  250 bits (638), Expect = 9e-64
 Identities = 116/189 (61%), Positives = 149/189 (78%), Gaps = 1/189 (0%)
 Frame = +3

Query: 1065 LDESPRSGVKRARMTYVDQEPSVHVVYNSLTRASKRKLEELLQHWSKWHTQQNFSTNDPN 1244
            +D +  SGVKRAR+T  +Q+PSVHV+YNSLTR SKRKLEELLQ WS+WH +   S++DP 
Sbjct: 127  IDGTSISGVKRARLTIDEQQPSVHVIYNSLTRDSKRKLEELLQQWSEWHAKYVSSSHDPK 186

Query: 1245 EIMETGEQTFFPALHFGVENASTVSFWIDNQTSKEQNN-FIPLDGDSVPTYDRGYAFGLT 1421
              +++GE+T+FPALH G+  +S VSFW+DNQT K+Q+  FI LDGDSVP YDRG+A GL 
Sbjct: 187  GQLDSGEKTYFPALHVGLNKSSAVSFWVDNQTRKQQDKEFISLDGDSVPLYDRGFALGLV 246

Query: 1422 SADSSTNVEGGVETQEVSRCFNCGSYSHSLKDCRKPRDNAAVDNARKEHQSKRNQTVGSR 1601
            S D  +  EG +E  + SRCFNCGSY+HS+K+C KPRDN AV+NARK+H+S+RNQ  GSR
Sbjct: 247  SEDGQSKPEGALEIIDASRCFNCGSYNHSMKECPKPRDNVAVNNARKQHKSRRNQNPGSR 306

Query: 1602 STPRYYQSS 1628
            +  RYYQ+S
Sbjct: 307  NPTRYYQNS 315


>emb|CBI16864.3| unnamed protein product [Vitis vinifera]
          Length = 1165

 Score =  250 bits (638), Expect = 9e-64
 Identities = 116/189 (61%), Positives = 149/189 (78%), Gaps = 1/189 (0%)
 Frame = +3

Query: 1065 LDESPRSGVKRARMTYVDQEPSVHVVYNSLTRASKRKLEELLQHWSKWHTQQNFSTNDPN 1244
            +D +  SGVKRAR+T  +Q+PSVHV+YNSLTR SKRKLEELLQ WS+WH +   S++DP 
Sbjct: 717  IDGTSISGVKRARLTIDEQQPSVHVIYNSLTRDSKRKLEELLQQWSEWHAKYVSSSHDPK 776

Query: 1245 EIMETGEQTFFPALHFGVENASTVSFWIDNQTSKEQNN-FIPLDGDSVPTYDRGYAFGLT 1421
              +++GE+T+FPALH G+  +S VSFW+DNQT K+Q+  FI LDGDSVP YDRG+A GL 
Sbjct: 777  GQLDSGEKTYFPALHVGLNKSSAVSFWVDNQTRKQQDKEFISLDGDSVPLYDRGFALGLV 836

Query: 1422 SADSSTNVEGGVETQEVSRCFNCGSYSHSLKDCRKPRDNAAVDNARKEHQSKRNQTVGSR 1601
            S D  +  EG +E  + SRCFNCGSY+HS+K+C KPRDN AV+NARK+H+S+RNQ  GSR
Sbjct: 837  SEDGQSKPEGALEIIDASRCFNCGSYNHSMKECPKPRDNVAVNNARKQHKSRRNQNPGSR 896

Query: 1602 STPRYYQSS 1628
            +  RYYQ+S
Sbjct: 897  NPTRYYQNS 905


>ref|XP_002277668.1| PREDICTED: 42 kDa peptidyl-prolyl isomerase isoform 2 [Vitis
           vinifera] gi|225450075|ref|XP_002277645.1| PREDICTED: 42
           kDa peptidyl-prolyl isomerase isoform 1 [Vitis vinifera]
           gi|297736282|emb|CBI24920.3| unnamed protein product
           [Vitis vinifera]
          Length = 365

 Score =  249 bits (637), Expect = 1e-63
 Identities = 124/208 (59%), Positives = 158/208 (75%), Gaps = 3/208 (1%)
 Frame = -2

Query: 617 GEPSKGKEGIPKVNSRAEILHEKVKKQVIKETHGQKPSKDSTCFLNCKAWIESTQFKFKD 438
           GEP +   G PKV+S  E+LHEKV KQ++KE HGQKPSK STCFL+ +AW ESTQ KF+D
Sbjct: 30  GEPLQDGTGPPKVDSEVEVLHEKVTKQIMKEGHGQKPSKYSTCFLHYRAWTESTQHKFED 89

Query: 437 TWFERQPFXXXXXXXXXXXXGVTIGVLSMKAGERALLHVGWELGYGKKGNHSSPFVPPMA 258
           TW E++P             G+ IGV +MK+GERALLHVGWELGYGK+G+ S P VPPMA
Sbjct: 90  TWNEQRPVEIVIGKEKKEMTGLAIGVSNMKSGERALLHVGWELGYGKEGSFSFPNVPPMA 149

Query: 257 DLVYEVEVISFEKSRNGNANDGVMSMEKRVQAAEERKTEGNAFFKDGKLSEAMQQYEMAI 78
           D++YEVE+I F++++ G A  G M++E+R+ AA+ RK +GN +FK+ KL EAMQQYEMAI
Sbjct: 150 DILYEVELIGFDETKEGKAR-GDMTVEERIGAADRRKMDGNVYFKEEKLEEAMQQYEMAI 208

Query: 77  SYVGNDTNFQL---YREMGLAVKNPCHL 3
           +Y+G+D  FQL   YR+M LAVKNPCHL
Sbjct: 209 AYMGDDFMFQLFGKYRDMALAVKNPCHL 236


>ref|XP_002299936.1| predicted protein [Populus trichocarpa] gi|222847194|gb|EEE84741.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score =  247 bits (630), Expect = 7e-63
 Identities = 125/208 (60%), Positives = 155/208 (74%), Gaps = 3/208 (1%)
 Frame = -2

Query: 617 GEPSKGKEGIPKVNSRAEILHEKVKKQVIKETHGQKPSKDSTCFLNCKAWIESTQFKFKD 438
           G+P +  +  PKV+S  EIL EKV KQV+KE HGQKP K +TCFL+ +AW ESTQ KF+D
Sbjct: 30  GDPVQHGDFPPKVDSAVEILQEKVTKQVVKEGHGQKPCKYATCFLHYRAWTESTQHKFED 89

Query: 437 TWFERQPFXXXXXXXXXXXXGVTIGVLSMKAGERALLHVGWELGYGKKGNHSSPFVPPMA 258
           TW E++PF            G+ +GV SMKAGERALLHVGWELGYGK+G+ S P VPPMA
Sbjct: 90  TWHEQRPFEMVLGKEKKEMAGLAVGVSSMKAGERALLHVGWELGYGKEGSFSFPNVPPMA 149

Query: 257 DLVYEVEVISFEKSRNGNANDGVMSMEKRVQAAEERKTEGNAFFKDGKLSEAMQQYEMAI 78
           D++YEVE+I F++ R G A  G M+ E+R+ AA+ RK +GN+ FKD KL EAMQQYEMAI
Sbjct: 150 DIIYEVELIGFDEVREGKAR-GDMTAEERIGAADRRKMDGNSLFKDEKLEEAMQQYEMAI 208

Query: 77  SYVGNDTNFQL---YREMGLAVKNPCHL 3
           +Y+G+D  FQL   YR+M LAVKNPCHL
Sbjct: 209 AYLGDDFMFQLFGKYRDMALAVKNPCHL 236


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