BLASTX nr result
ID: Coptis24_contig00007324
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00007324
(351 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containi... 114 6e-24
ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containi... 114 1e-23
ref|XP_002319049.1| predicted protein [Populus trichocarpa] gi|2... 112 3e-23
ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containi... 111 7e-23
ref|XP_002328376.1| predicted protein [Populus trichocarpa] gi|2... 111 7e-23
>ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 114 bits (286), Expect = 6e-24
Identities = 53/115 (46%), Positives = 83/115 (72%)
Frame = +1
Query: 7 LFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALC 186
LF+EM +G++P+V+SYS+LIHG C + + LF++M + + P++VTF++L+D LC
Sbjct: 259 LFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLC 318
Query: 187 KEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
KEGK EA ++LE+M+QRGI+P ++T+N+LI G C+ + N A EL M S+G
Sbjct: 319 KEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDG-FCMVGDLNSARELFLSMPSKG 372
Score = 80.1 bits (196), Expect = 2e-13
Identities = 37/94 (39%), Positives = 56/94 (59%)
Frame = +1
Query: 7 LFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALC 186
L + MI RG+VPN+++Y+SLI G C + L A LF M + + P+ +++T L++ C
Sbjct: 329 LLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYC 388
Query: 187 KEGKTNEALQVLELMLQRGIMPTVVTFNALIHGL 288
K K EA+ + MLQ G P V T+ L+ GL
Sbjct: 389 KTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGL 422
Score = 78.6 bits (192), Expect = 5e-13
Identities = 39/116 (33%), Positives = 64/116 (55%)
Frame = +1
Query: 1 VNLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDA 180
+ LF E+ N+ +YS LI GLC +L+ A LFE +S+ + P+VVT+ I++
Sbjct: 467 MELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHG 526
Query: 181 LCKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISR 348
CK G+ + A + E M + G P ++ +N L+ G C N + +LLH M+ +
Sbjct: 527 FCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCG-FCEGNKLEEVIKLLHKMVQK 581
Score = 72.4 bits (176), Expect = 4e-11
Identities = 39/116 (33%), Positives = 66/116 (56%)
Frame = +1
Query: 4 NLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDAL 183
+LF EM+ +GV P++V++S LI LC ++ A L E M +R I PN++T+ L+D
Sbjct: 293 HLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGF 352
Query: 184 CKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
C G N A ++ M +G+ P +++ LI+G C + +A L ++M+ G
Sbjct: 353 CMVGDLNSARELFLSMPSKGLEPDEISYTTLING-YCKTWKVKEAMNLYNEMLQVG 407
Score = 70.5 bits (171), Expect = 1e-10
Identities = 31/108 (28%), Positives = 61/108 (56%)
Frame = +1
Query: 7 LFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALC 186
LF+++ G+ P+VV+Y+ +IHG C + Q+ A LFE M + +P+++ + L+ C
Sbjct: 504 LFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFC 563
Query: 187 KEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELL 330
+ K E +++L M+Q+ + P + ++ +LC + K +LL
Sbjct: 564 EGNKLEEVIKLLHKMVQKDVSPNAASCTIVV-DMLCKDEKYKKFVDLL 610
Score = 69.3 bits (168), Expect = 3e-10
Identities = 38/116 (32%), Positives = 63/116 (54%)
Frame = +1
Query: 4 NLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDAL 183
+ F M+ +P + S++ L+ GL I SL+ +M +SP++ T +IL + L
Sbjct: 77 HFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCL 136
Query: 184 CKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
C + +EAL + +L+RG +P VVT+ LI G LC+ + ++AT L M G
Sbjct: 137 CNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKG-LCMEHRISEATRLFLRMQKLG 191
Score = 69.3 bits (168), Expect = 3e-10
Identities = 38/114 (33%), Positives = 66/114 (57%)
Frame = +1
Query: 4 NLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDAL 183
+L+ EM G+ P++ + S L + LC++ ++ A++ + +R PNVVT+T L+ L
Sbjct: 112 SLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGL 171
Query: 184 CKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMIS 345
C E + +EA ++ M + G P VT+ LI G LC + N N A +L +M++
Sbjct: 172 CMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKG-LCQTGNVNIALKLHKEMLN 224
Score = 66.6 bits (161), Expect = 2e-09
Identities = 39/115 (33%), Positives = 55/115 (47%)
Frame = +1
Query: 7 LFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALC 186
LF M GV N Y + GLC L A+ LF ++ + N+ ++ L+D LC
Sbjct: 434 LFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLC 493
Query: 187 KEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
K GK A ++ E + Q G+ P VVT+N +IHG C + A L M G
Sbjct: 494 KAGKLETAWELFEKLSQEGLQPDVVTYNIMIHG-FCKVGQVDNANILFEKMEENG 547
Score = 61.6 bits (148), Expect = 6e-08
Identities = 34/113 (30%), Positives = 65/113 (57%)
Frame = +1
Query: 7 LFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALC 186
LF M +G+ P+ +SY++LI+G C ++K A++L+ +M + SPNV T+ L+ L
Sbjct: 364 LFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLF 423
Query: 187 KEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMIS 345
++GK +A ++ +M G+ + + G LC ++ +A EL +++ S
Sbjct: 424 QKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDG-LCKNDCLFEAMELFNELKS 475
>ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 114 bits (284), Expect = 1e-23
Identities = 56/116 (48%), Positives = 80/116 (68%)
Frame = +1
Query: 4 NLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDAL 183
+LF+EM +G+ P V+SY+SLIHG C + + A LF +M + + PNVVTF +L+D L
Sbjct: 263 DLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVL 322
Query: 184 CKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
CKEGK EA +LE+M+QRGI+P ++T+N+LI G C+ + N A EL M S+G
Sbjct: 323 CKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEG-FCLVGDLNSARELFVSMPSKG 377
Score = 82.8 bits (203), Expect = 3e-14
Identities = 39/95 (41%), Positives = 59/95 (62%)
Frame = +1
Query: 4 NLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDAL 183
+L + MI RG+VPN+++Y+SLI G C + L A LF M + P+V+ +T+L++
Sbjct: 333 DLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGY 392
Query: 184 CKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGL 288
CK K EA+++ MLQ G P V T+ AL+ GL
Sbjct: 393 CKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGL 427
Score = 78.6 bits (192), Expect = 5e-13
Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Frame = +1
Query: 1 VNLFQEMI------GRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTF 162
+ L QEM+ G P V+SYS +I LC R+ A LFE+M + ++P V+++
Sbjct: 221 LKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISY 280
Query: 163 TILVDALCKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMI 342
T L+ C GK EA ++ M+ +G+ P VVTFN LI +LC +A +LL MI
Sbjct: 281 TSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLI-DVLCKEGKVIEAKDLLEVMI 339
Query: 343 SRG 351
RG
Sbjct: 340 QRG 342
Score = 77.0 bits (188), Expect = 1e-12
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 41/152 (26%)
Frame = +1
Query: 19 MIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPN---------------- 150
++ RG +P++V+Y++LI GLC ++ A LF M K +PN
Sbjct: 157 ILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGN 216
Query: 151 -------------------------VVTFTILVDALCKEGKTNEALQVLELMLQRGIMPT 255
V++++I++DALCK+ + +EA + E M +G+ PT
Sbjct: 217 ISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPT 276
Query: 256 VVTFNALIHGLLCISNNWNKATELLHDMISRG 351
V+++ +LIHG C W +A L ++M+++G
Sbjct: 277 VISYTSLIHG-FCCGGKWEEAKRLFNEMVNQG 307
Score = 72.4 bits (176), Expect = 4e-11
Identities = 40/115 (34%), Positives = 65/115 (56%)
Frame = +1
Query: 7 LFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALC 186
LF EM+ +GV PNVV+++ LI LC ++ A L E M +R I PN++T+ L++ C
Sbjct: 299 LFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFC 358
Query: 187 KEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
G N A ++ M +G P V+ + LI+G C ++ +A +L + M+ G
Sbjct: 359 LVGDLNSARELFVSMPSKGCEPDVICYTVLING-YCKTSKVEEAMKLYNGMLQVG 412
Score = 65.5 bits (158), Expect = 4e-09
Identities = 35/116 (30%), Positives = 61/116 (52%)
Frame = +1
Query: 1 VNLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDA 180
+ LF ++ + ++ ++ LI GLC +L+ A LFE + + + P+VVT+ I++
Sbjct: 472 MELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHE 531
Query: 181 LCKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISR 348
C+ G+ +A + + M + G P +T+ LI G S K ELLH M+ R
Sbjct: 532 FCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFF-ESKKLEKVVELLHMMVQR 586
Score = 63.5 bits (153), Expect = 2e-08
Identities = 37/114 (32%), Positives = 57/114 (50%)
Frame = +1
Query: 10 FQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALCK 189
F M+ P + S++ L+ GL I+ L+ M ISP+ T IL++ LC
Sbjct: 84 FHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCN 143
Query: 190 EGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
+ E L V+ +L+RG +P +VT+ LI G LC+ + +KA L M G
Sbjct: 144 VNRVGEGLAVMAGILRRGYIPDIVTYTTLIKG-LCMEHRISKAALLFTRMQKLG 196
Score = 59.3 bits (142), Expect = 3e-07
Identities = 37/115 (32%), Positives = 54/115 (46%)
Frame = +1
Query: 7 LFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALC 186
LF M G+ ++ Y ++GLC L A+ LF + +I ++ F L+D LC
Sbjct: 439 LFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLC 498
Query: 187 KEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
K GK A ++ E + Q + P VVT+N +IH C KA L M G
Sbjct: 499 KAGKLETAWELFEKLPQEELQPDVVTYNIMIHE-FCRGGQVVKANILFQKMEKNG 552
Score = 58.9 bits (141), Expect = 4e-07
Identities = 29/113 (25%), Positives = 64/113 (56%)
Frame = +1
Query: 7 LFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALC 186
L+ +M G+ P+ + + L++ LC++ ++ +++ + +R P++VT+T L+ LC
Sbjct: 118 LYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLC 177
Query: 187 KEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMIS 345
E + ++A + M + G P +T+ L+ G LC + N + A +L +M++
Sbjct: 178 MEHRISKAALLFTRMQKLGCTPNAITYGTLMKG-LCRTGNISIALKLHQEMLN 229
>ref|XP_002319049.1| predicted protein [Populus trichocarpa] gi|222857425|gb|EEE94972.1|
predicted protein [Populus trichocarpa]
Length = 585
Score = 112 bits (280), Expect = 3e-23
Identities = 53/114 (46%), Positives = 78/114 (68%)
Frame = +1
Query: 10 FQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALCK 189
F EM+ +G+ PNVV+YSS++HG C++ QL A SLF+ M R++ PN VTFTILVD LCK
Sbjct: 234 FSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCK 293
Query: 190 EGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
EG EA +V E+M + G+ P T++AL+ G C+ + ++A +L M+ +G
Sbjct: 294 EGMILEARRVFEMMTENGVEPDAYTYSALMDG-YCLQSQMDEAQKLFDIMVGKG 346
Score = 90.5 bits (223), Expect = 1e-16
Identities = 42/116 (36%), Positives = 70/116 (60%)
Frame = +1
Query: 1 VNLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDA 180
V LF E+ G P++++Y+++I GLC I A+ L + M ++ P+VV + ++D+
Sbjct: 161 VKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDS 220
Query: 181 LCKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISR 348
LCK+ + NEA+ M+ +GI P VVT+++++HG C N+AT L MI R
Sbjct: 221 LCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHG-FCNLGQLNEATSLFKQMIGR 275
Score = 84.3 bits (207), Expect = 9e-15
Identities = 41/115 (35%), Positives = 72/115 (62%)
Frame = +1
Query: 4 NLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDAL 183
+LF++MIGR V+PN V+++ L+ GLC + A +FE M++ + P+ T++ L+D
Sbjct: 267 SLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGY 326
Query: 184 CKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISR 348
C + + +EA ++ ++M+ +G P+V +N LI+G C S N+A LL +M R
Sbjct: 327 CLQSQMDEAQKLFDIMVGKGFAPSVRVYNILING-HCKSRRLNEAKTLLSEMYDR 380
Score = 80.9 bits (198), Expect = 1e-13
Identities = 38/112 (33%), Positives = 68/112 (60%)
Frame = +1
Query: 16 EMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALCKEG 195
+M G+ P V++ +L++GLCS ++ A+ LF+++ K +P+++T+T ++ LCK G
Sbjct: 131 KMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIG 190
Query: 196 KTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
T ALQ+L+ M ++G P VV +N +I LC N+A +M+ +G
Sbjct: 191 HTTNALQLLKKMEEKGCKPDVVAYNTVIDS-LCKDRRANEAMYFFSEMVDQG 241
Score = 77.4 bits (189), Expect = 1e-12
Identities = 38/115 (33%), Positives = 67/115 (58%)
Frame = +1
Query: 7 LFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALC 186
L + M + P++ Y+ LI G+C+ +L+ A LF ++ + I P+VVT+T+++ L
Sbjct: 443 LLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLL 502
Query: 187 KEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
KEG +NEA ++ M+ G +P T+N I G L + + + A L+ +M+ RG
Sbjct: 503 KEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFL-RNGDPSNAVRLIEEMVGRG 556
Score = 75.9 bits (185), Expect = 3e-12
Identities = 39/115 (33%), Positives = 65/115 (56%)
Frame = +1
Query: 7 LFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALC 186
L EM R + P+ V+YS+L+ G C + + A LF++M + P+ +T++IL+D LC
Sbjct: 373 LLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLC 432
Query: 187 KEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
K G +EA ++L+ M + I P + +N LI G +C A EL ++ +G
Sbjct: 433 KHGHLDEAFRLLKAMQESKIEPHICIYNILIQG-MCNFGKLEAARELFSNLFVKG 486
Score = 75.9 bits (185), Expect = 3e-12
Identities = 39/115 (33%), Positives = 64/115 (55%)
Frame = +1
Query: 7 LFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALC 186
LF+EM G++P+ ++YS L+ GLC L A L + M + I P++ + IL+ +C
Sbjct: 408 LFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMC 467
Query: 187 KEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
GK A ++ + +GI P+VVT+ +I GLL + N+A E+ M+ G
Sbjct: 468 NFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLS-NEACEMFRKMVVNG 521
Score = 75.1 bits (183), Expect = 6e-12
Identities = 35/96 (36%), Positives = 58/96 (60%)
Frame = +1
Query: 1 VNLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDA 180
+ L ++M +G P+VV+Y+++I LC R+ A+ F +M + I PNVVT++ ++
Sbjct: 196 LQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHG 255
Query: 181 LCKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGL 288
C G+ NEA + + M+ R +MP VTF L+ GL
Sbjct: 256 FCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGL 291
Score = 72.0 bits (175), Expect = 5e-11
Identities = 37/111 (33%), Positives = 65/111 (58%)
Frame = +1
Query: 7 LFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALC 186
LF M+G+G P+V Y+ LI+G C R+L A +L +M R ++P+ VT++ L+ C
Sbjct: 338 LFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFC 397
Query: 187 KEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDM 339
+ G+ A ++ + M G++P +T++ L+ G LC + ++A LL M
Sbjct: 398 QAGRPQVAQKLFKEMCSYGLLPDSITYSILLDG-LCKHGHLDEAFRLLKAM 447
Score = 67.8 bits (164), Expect = 9e-10
Identities = 38/115 (33%), Positives = 61/115 (53%)
Frame = +1
Query: 7 LFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALC 186
+F+ M GV P+ +YS+L+ G C Q+ A LF+ M + +P+V + IL++ C
Sbjct: 303 VFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHC 362
Query: 187 KEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
K + NEA +L M R + P VT++ L+ G C + A +L +M S G
Sbjct: 363 KSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQG-FCQAGRPQVAQKLFKEMCSYG 416
Score = 58.9 bits (141), Expect = 4e-07
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Frame = +1
Query: 10 FQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALCK 189
F +++G +P VV ++ L+ L + ISL + M +I PNV T TIL++ LC
Sbjct: 57 FNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCH 116
Query: 190 EGK--TNEALQVLELMLQRGIMPTVVTFNALIHGL 288
+ + A L M + G+ PT VTF L++GL
Sbjct: 117 SNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGL 151
Score = 54.7 bits (130), Expect = 8e-06
Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Frame = +1
Query: 1 VNLFQEMIGRGVVPNVVSYSSLIHGLCSIRQ--LKGAISLFEDMSKRSISPNVVTFTILV 174
++L ++M + PNV + + LI+ LC + + A S M K + P VTF L+
Sbjct: 89 ISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLL 148
Query: 175 DALCKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
+ LC + K +A+++ + + + G P+++T+ +I GL I + N A +LL M +G
Sbjct: 149 NGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTN-ALQLLKKMEEKG 206
>ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product
[Vitis vinifera]
Length = 627
Score = 111 bits (277), Expect = 7e-23
Identities = 56/115 (48%), Positives = 75/115 (65%)
Frame = +1
Query: 7 LFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALC 186
LF EM GRG+ P+VV+YSS+IHG+C + +GA LF +M + PNVVTF +L+DALC
Sbjct: 260 LFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALC 319
Query: 187 KEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
K GK EA +L+LM+QRG P T+N LI G C+ + A +L M S+G
Sbjct: 320 KAGKMEEANHLLKLMIQRGESPDTFTYNTLIDG-FCLEGRIDDARDLFVSMESKG 373
Score = 78.2 bits (191), Expect = 7e-13
Identities = 38/116 (32%), Positives = 64/116 (55%)
Frame = +1
Query: 1 VNLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDA 180
+ LF + P++ ++ LI GLC R+++ A LF +S + PNV+T+T+++
Sbjct: 468 MELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHG 527
Query: 181 LCKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISR 348
LCK G+ A + M ++G P +VTFN L+ G C ++ K ELL +M +
Sbjct: 528 LCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRG-FCQNDEMQKVVELLQEMAEK 582
Score = 73.9 bits (180), Expect = 1e-11
Identities = 40/114 (35%), Positives = 65/114 (57%)
Frame = +1
Query: 7 LFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALC 186
LF EM+ GV PNVV+++ LI LC +++ A L + M +R SP+ T+ L+D C
Sbjct: 295 LFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFC 354
Query: 187 KEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISR 348
EG+ ++A + M +GI V++N LI+G C S +A +L +M+ +
Sbjct: 355 LEGRIDDARDLFVSMESKGIETDAVSYNVLING-YCKSGRMVEAKKLYREMMCK 407
Score = 73.2 bits (178), Expect = 2e-11
Identities = 39/116 (33%), Positives = 67/116 (57%), Gaps = 4/116 (3%)
Frame = +1
Query: 4 NLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDAL 183
+L + MI RG P+ +Y++LI G C ++ A LF M + I + V++ +L++
Sbjct: 329 HLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGY 388
Query: 184 CKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLL---CISNNWNKATEL-LHDM 339
CK G+ EA ++ M+ + IMPTV+T+N L+ GL + + WN E+ +HD+
Sbjct: 389 CKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDL 444
Score = 72.8 bits (177), Expect = 3e-11
Identities = 37/115 (32%), Positives = 70/115 (60%)
Frame = +1
Query: 1 VNLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDA 180
++L++ M G+ P+ ++ + LI+ C++ ++ +++ +M +R SPN VTFT LV
Sbjct: 112 ISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKG 171
Query: 181 LCKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMIS 345
LC + +EA +L M++ G P VVT+ L++G LC++ N A +L +M++
Sbjct: 172 LCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNG-LCMTGNTMLAVKLHEEMLN 225
Score = 71.6 bits (174), Expect = 6e-11
Identities = 38/116 (32%), Positives = 56/116 (48%)
Frame = +1
Query: 4 NLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDAL 183
NLF EM + P +Y+ L+ GLC L A+ LF + P++ F L+D L
Sbjct: 434 NLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGL 493
Query: 184 CKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
CK K A ++ + G+ P V+T+ +IHG LC S A +L M +G
Sbjct: 494 CKARKIEIARELFNRLSHEGLEPNVITYTVMIHG-LCKSGQLENAKDLFLGMEEKG 548
Score = 71.2 bits (173), Expect = 8e-11
Identities = 38/116 (32%), Positives = 66/116 (56%)
Frame = +1
Query: 4 NLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDAL 183
++F +I P + S+++L+ + I++ ISL++ MS ++P+ +T IL++
Sbjct: 78 SVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCY 137
Query: 184 CKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
C K + L VL ML+RG P VTF +L+ G LC+ + ++AT LL M+ G
Sbjct: 138 CNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKG-LCLGSRISEATGLLRKMVRMG 192
Score = 71.2 bits (173), Expect = 8e-11
Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 6/123 (4%)
Frame = +1
Query: 1 VNLFQEMI------GRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTF 162
V L +EM+ G + PN+V Y ++I LC + LF +M R ISP+VV +
Sbjct: 217 VKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAY 276
Query: 163 TILVDALCKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMI 342
+ ++ +C G+ A + M+ G+ P VVTFN LI LC + +A LL MI
Sbjct: 277 SSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDA-LCKAGKMEEANHLLKLMI 335
Query: 343 SRG 351
RG
Sbjct: 336 QRG 338
Score = 69.3 bits (168), Expect = 3e-10
Identities = 35/115 (30%), Positives = 65/115 (56%)
Frame = +1
Query: 7 LFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALC 186
L++EM+ + ++P V++Y++L+ GL +++ A +LF +M ++P T+ IL+D LC
Sbjct: 400 LYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLC 459
Query: 187 KEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
K +EA+++ + P++ FN LI G LC + A EL + + G
Sbjct: 460 KNNHLSEAMELFHYLENHDFQPSIQIFNCLIDG-LCKARKIEIARELFNRLSHEG 513
Score = 68.9 bits (167), Expect = 4e-10
Identities = 37/110 (33%), Positives = 61/110 (55%)
Frame = +1
Query: 4 NLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDAL 183
+LF M +G+ + VSY+ LI+G C ++ A L+ +M + I P V+T+ L+ L
Sbjct: 364 DLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGL 423
Query: 184 CKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLH 333
+EGK +A + M + P T+N L+ G LC +N+ ++A EL H
Sbjct: 424 FREGKVRDAWNLFGEMKVHDLTPESCTYNILLDG-LCKNNHLSEAMELFH 472
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/115 (29%), Positives = 62/115 (53%)
Frame = +1
Query: 7 LFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALC 186
LF + G+ PNV++Y+ +IHGLC QL+ A LF M ++ +PN+VTF L+ C
Sbjct: 505 LFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFC 564
Query: 187 KEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
+ + + +++L+ M ++ P T + ++ LL + + LL ++G
Sbjct: 565 QNDEMQKVVELLQEMAEKDFSPDASTISIVV-DLLSKDEKYREYLHLLPTFPAQG 618
Score = 54.7 bits (130), Expect = 8e-06
Identities = 25/80 (31%), Positives = 48/80 (60%)
Frame = +1
Query: 4 NLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDAL 183
+LF M +G PN+V++++L+ G C +++ + L ++M+++ SP+ T +I+VD L
Sbjct: 539 DLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLL 598
Query: 184 CKEGKTNEALQVLELMLQRG 243
K+ K E L +L +G
Sbjct: 599 SKDEKYREYLHLLPTFPAQG 618
>ref|XP_002328376.1| predicted protein [Populus trichocarpa] gi|222838091|gb|EEE76456.1|
predicted protein [Populus trichocarpa]
Length = 599
Score = 111 bits (277), Expect = 7e-23
Identities = 53/117 (45%), Positives = 79/117 (67%)
Frame = +1
Query: 1 VNLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDA 180
++L EM+ RG+ P+VV+YS+++HG CS+ L A LF +M R++ PN VTFTILVD
Sbjct: 252 MDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDG 311
Query: 181 LCKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
LCKEG +EA V E M ++G P T+NAL+ G C++N ++A ++L M+ +G
Sbjct: 312 LCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDG-YCLNNQMDEAQKVLDIMVDKG 367
Score = 100 bits (249), Expect = 1e-19
Identities = 47/116 (40%), Positives = 75/116 (64%)
Frame = +1
Query: 1 VNLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDA 180
V LF EM+ RG P+V+SYS++I+GLC A+ L M ++ PN+V +T ++D+
Sbjct: 182 VGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDS 241
Query: 181 LCKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISR 348
LCK+ N+A+ +L M+ RGI P VVT++ ++HG C + N+AT L ++M+ R
Sbjct: 242 LCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHG-FCSLGHLNEATILFNEMVGR 296
Score = 84.7 bits (208), Expect = 7e-15
Identities = 42/111 (37%), Positives = 67/111 (60%)
Frame = +1
Query: 7 LFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALC 186
LF EM+GR V+PN V+++ L+ GLC + A +FE M+K+ PN T+ L+D C
Sbjct: 289 LFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYC 348
Query: 187 KEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDM 339
+ +EA +VL++M+ +G P V ++N LI+G C ++A LL +M
Sbjct: 349 LNNQMDEAQKVLDIMVDKGCAPVVHSYNILING-YCKRRRLDEAKSLLVEM 398
Score = 83.6 bits (205), Expect = 2e-14
Identities = 38/117 (32%), Positives = 73/117 (62%)
Frame = +1
Query: 1 VNLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDA 180
+++ +M G+ P+ +++++LI+G C ++K A+ LF +M +R P+V++++ +++
Sbjct: 147 ISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVING 206
Query: 181 LCKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
LCK G T+ ALQ+L M ++G P +V + +I LC N A +LL +M+ RG
Sbjct: 207 LCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDS-LCKDTLVNDAMDLLSEMVDRG 262
Score = 80.1 bits (196), Expect = 2e-13
Identities = 40/116 (34%), Positives = 72/116 (62%)
Frame = +1
Query: 4 NLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDAL 183
+L EM + + P+ V+YS+L+ GLC + + + A++LF++M + P+++T++ L+D L
Sbjct: 393 SLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGL 452
Query: 184 CKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
CK G +EAL++L+ M + I P +V +N LI G+ I+ A EL + + G
Sbjct: 453 CKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMF-IAGKLEVAKELFSKLFADG 507
Score = 78.2 bits (191), Expect = 7e-13
Identities = 39/107 (36%), Positives = 68/107 (63%)
Frame = +1
Query: 19 MIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALCKEGK 198
M+ +G P V SY+ LI+G C R+L A SL +MS++ ++P+ VT++ L+ LC+ G+
Sbjct: 363 MVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGR 422
Query: 199 TNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDM 339
EAL + + M G++P ++T++ L+ G LC + ++A +LL M
Sbjct: 423 PQEALNLFKEMCSSGLLPDLMTYSTLLDG-LCKHGHLDEALKLLKSM 468
Score = 74.7 bits (182), Expect = 7e-12
Identities = 43/117 (36%), Positives = 68/117 (58%)
Frame = +1
Query: 1 VNLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDA 180
V+L +M GV NV S + LI+ LC + + AIS+ M K I P+ +TF L++
Sbjct: 112 VSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLING 171
Query: 181 LCKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
C EG+ EA+ + M++RG P V++++ +I+G LC S N + A +LL M +G
Sbjct: 172 RCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVING-LCKSGNTSMALQLLRKMEEKG 227
Score = 74.3 bits (181), Expect = 9e-12
Identities = 34/97 (35%), Positives = 59/97 (60%)
Frame = +1
Query: 1 VNLFQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDA 180
+NLF+EM G++P++++YS+L+ GLC L A+ L + M + I P++V + IL++
Sbjct: 427 LNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEG 486
Query: 181 LCKEGKTNEALQVLELMLQRGIMPTVVTFNALIHGLL 291
+ GK A ++ + GI PT+ T+ +I GLL
Sbjct: 487 MFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLL 523
Score = 63.2 bits (152), Expect = 2e-08
Identities = 35/114 (30%), Positives = 56/114 (49%)
Frame = +1
Query: 10 FQEMIGRGVVPNVVSYSSLIHGLCSIRQLKGAISLFEDMSKRSISPNVVTFTILVDALCK 189
F M+ P+VV + + + +Q +SL M ++ NV + IL++ LC+
Sbjct: 80 FYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCR 139
Query: 190 EGKTNEALQVLELMLQRGIMPTVVTFNALIHGLLCISNNWNKATELLHDMISRG 351
A+ VL M + GI P +TFN LI+G CI +A L ++M+ RG
Sbjct: 140 LNHVVFAISVLGKMFKLGIQPDAITFNTLING-RCIEGEIKEAVGLFNEMVRRG 192