BLASTX nr result

ID: Coptis24_contig00007313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007313
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280494.1| PREDICTED: arabinogalactan peptide 20 [Vitis...    59   5e-07
ref|XP_002320846.1| hypothetical protein POPTRDRAFT_572354 [Popu...    58   1e-06
ref|NP_001150489.1| AGP16 precursor [Zea mays] gi|195639584|gb|A...    58   1e-06
ref|NP_001167672.1| AGP16 precursor [Zea mays] gi|195611018|gb|A...    58   1e-06
ref|NP_001158946.1| AGP16 precursor [Zea mays] gi|195608422|gb|A...    58   1e-06

>ref|XP_002280494.1| PREDICTED: arabinogalactan peptide 20 [Vitis vinifera]
           gi|147812721|emb|CAN61749.1| hypothetical protein
           VITISV_014579 [Vitis vinifera]
           gi|297745395|emb|CBI40475.3| unnamed protein product
           [Vitis vinifera]
          Length = 75

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = +1

Query: 238 TSDGTSIDLGIAYVLMVAALVLTYIIHPLGDASYSLF 348
           TSDGT+ID GIAYVLM+ ALVLTY+IHPL  +SYS F
Sbjct: 39  TSDGTAIDQGIAYVLMLVALVLTYLIHPLDASSYSFF 75


>ref|XP_002320846.1| hypothetical protein POPTRDRAFT_572354 [Populus trichocarpa]
           gi|118483747|gb|ABK93766.1| unknown [Populus
           trichocarpa] gi|222861619|gb|EEE99161.1| hypothetical
           protein POPTRDRAFT_572354 [Populus trichocarpa]
          Length = 76

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/37 (72%), Positives = 32/37 (86%)
 Frame = +1

Query: 238 TSDGTSIDLGIAYVLMVAALVLTYIIHPLGDASYSLF 348
           TSDGTSID GIAY+LM+ ALVLTY+IHPL  +SY+ F
Sbjct: 40  TSDGTSIDQGIAYLLMLVALVLTYLIHPLDASSYTFF 76


>ref|NP_001150489.1| AGP16 precursor [Zea mays] gi|195639584|gb|ACG39260.1| AGP16 [Zea
           mays] gi|413925906|gb|AFW65838.1| AGP16 [Zea mays]
          Length = 76

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/38 (76%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
 Frame = +1

Query: 238 TSDGTSIDLGIAYVLMVAALVLTYIIHPLGDAS-YSLF 348
           TSDGTSIDLGIAY+LM+ ALVLTY+IHPL  +S Y LF
Sbjct: 39  TSDGTSIDLGIAYILMLVALVLTYLIHPLDASSPYKLF 76


>ref|NP_001167672.1| AGP16 precursor [Zea mays] gi|195611018|gb|ACG27339.1| AGP16 [Zea
           mays] gi|195621410|gb|ACG32535.1| AGP16 [Zea mays]
           gi|223948207|gb|ACN28187.1| unknown [Zea mays]
           gi|413936452|gb|AFW71003.1| hypothetical protein
           ZEAMMB73_583747 [Zea mays]
          Length = 73

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/38 (76%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
 Frame = +1

Query: 238 TSDGTSIDLGIAYVLMVAALVLTYIIHPLGDAS-YSLF 348
           TSDGTSIDLGIAY+LM+ ALVLTY+IHPL  +S Y LF
Sbjct: 36  TSDGTSIDLGIAYILMLVALVLTYLIHPLDASSPYKLF 73


>ref|NP_001158946.1| AGP16 precursor [Zea mays] gi|195608422|gb|ACG26041.1| AGP16 [Zea
           mays]
          Length = 75

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/38 (76%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
 Frame = +1

Query: 238 TSDGTSIDLGIAYVLMVAALVLTYIIHPLGDAS-YSLF 348
           TSDGTSIDLGIAY+LM+ ALVLTY+IHPL  +S Y LF
Sbjct: 38  TSDGTSIDLGIAYILMLVALVLTYLIHPLDASSPYKLF 75


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