BLASTX nr result
ID: Coptis24_contig00007313
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00007313 (589 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280494.1| PREDICTED: arabinogalactan peptide 20 [Vitis... 59 5e-07 ref|XP_002320846.1| hypothetical protein POPTRDRAFT_572354 [Popu... 58 1e-06 ref|NP_001150489.1| AGP16 precursor [Zea mays] gi|195639584|gb|A... 58 1e-06 ref|NP_001167672.1| AGP16 precursor [Zea mays] gi|195611018|gb|A... 58 1e-06 ref|NP_001158946.1| AGP16 precursor [Zea mays] gi|195608422|gb|A... 58 1e-06 >ref|XP_002280494.1| PREDICTED: arabinogalactan peptide 20 [Vitis vinifera] gi|147812721|emb|CAN61749.1| hypothetical protein VITISV_014579 [Vitis vinifera] gi|297745395|emb|CBI40475.3| unnamed protein product [Vitis vinifera] Length = 75 Score = 59.3 bits (142), Expect = 5e-07 Identities = 28/37 (75%), Positives = 32/37 (86%) Frame = +1 Query: 238 TSDGTSIDLGIAYVLMVAALVLTYIIHPLGDASYSLF 348 TSDGT+ID GIAYVLM+ ALVLTY+IHPL +SYS F Sbjct: 39 TSDGTAIDQGIAYVLMLVALVLTYLIHPLDASSYSFF 75 >ref|XP_002320846.1| hypothetical protein POPTRDRAFT_572354 [Populus trichocarpa] gi|118483747|gb|ABK93766.1| unknown [Populus trichocarpa] gi|222861619|gb|EEE99161.1| hypothetical protein POPTRDRAFT_572354 [Populus trichocarpa] Length = 76 Score = 58.2 bits (139), Expect = 1e-06 Identities = 27/37 (72%), Positives = 32/37 (86%) Frame = +1 Query: 238 TSDGTSIDLGIAYVLMVAALVLTYIIHPLGDASYSLF 348 TSDGTSID GIAY+LM+ ALVLTY+IHPL +SY+ F Sbjct: 40 TSDGTSIDQGIAYLLMLVALVLTYLIHPLDASSYTFF 76 >ref|NP_001150489.1| AGP16 precursor [Zea mays] gi|195639584|gb|ACG39260.1| AGP16 [Zea mays] gi|413925906|gb|AFW65838.1| AGP16 [Zea mays] Length = 76 Score = 57.8 bits (138), Expect = 1e-06 Identities = 29/38 (76%), Positives = 33/38 (86%), Gaps = 1/38 (2%) Frame = +1 Query: 238 TSDGTSIDLGIAYVLMVAALVLTYIIHPLGDAS-YSLF 348 TSDGTSIDLGIAY+LM+ ALVLTY+IHPL +S Y LF Sbjct: 39 TSDGTSIDLGIAYILMLVALVLTYLIHPLDASSPYKLF 76 >ref|NP_001167672.1| AGP16 precursor [Zea mays] gi|195611018|gb|ACG27339.1| AGP16 [Zea mays] gi|195621410|gb|ACG32535.1| AGP16 [Zea mays] gi|223948207|gb|ACN28187.1| unknown [Zea mays] gi|413936452|gb|AFW71003.1| hypothetical protein ZEAMMB73_583747 [Zea mays] Length = 73 Score = 57.8 bits (138), Expect = 1e-06 Identities = 29/38 (76%), Positives = 33/38 (86%), Gaps = 1/38 (2%) Frame = +1 Query: 238 TSDGTSIDLGIAYVLMVAALVLTYIIHPLGDAS-YSLF 348 TSDGTSIDLGIAY+LM+ ALVLTY+IHPL +S Y LF Sbjct: 36 TSDGTSIDLGIAYILMLVALVLTYLIHPLDASSPYKLF 73 >ref|NP_001158946.1| AGP16 precursor [Zea mays] gi|195608422|gb|ACG26041.1| AGP16 [Zea mays] Length = 75 Score = 57.8 bits (138), Expect = 1e-06 Identities = 29/38 (76%), Positives = 33/38 (86%), Gaps = 1/38 (2%) Frame = +1 Query: 238 TSDGTSIDLGIAYVLMVAALVLTYIIHPLGDAS-YSLF 348 TSDGTSIDLGIAY+LM+ ALVLTY+IHPL +S Y LF Sbjct: 38 TSDGTSIDLGIAYILMLVALVLTYLIHPLDASSPYKLF 75