BLASTX nr result

ID: Coptis24_contig00007306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007306
         (1935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270552.1| PREDICTED: uncharacterized protein LOC100261...   310   1e-81
ref|XP_002301615.1| predicted protein [Populus trichocarpa] gi|2...   298   3e-78
ref|XP_002529332.1| hypothetical protein RCOM_1016710 [Ricinus c...   280   1e-72
emb|CAN61787.1| hypothetical protein VITISV_006025 [Vitis vinifera]   263   1e-67
ref|XP_003628559.1| GD3A [Medicago truncatula] gi|355522581|gb|A...   227   1e-56

>ref|XP_002270552.1| PREDICTED: uncharacterized protein LOC100261856 [Vitis vinifera]
            gi|297739184|emb|CBI28835.3| unnamed protein product
            [Vitis vinifera]
          Length = 514

 Score =  310 bits (793), Expect = 1e-81
 Identities = 199/529 (37%), Positives = 280/529 (52%), Gaps = 19/529 (3%)
 Frame = +1

Query: 4    EFPTDSINKLQITLRKQANIPPYFYNLEEEDPTFQKLPSVQEAIESLYPSLPPYLRCKQC 183
            E P D + ++QI LRK AN+  Y    +  DP+   LPS  + I    PS PP+LRC  C
Sbjct: 6    EIPVDLVRQVQILLRKDANLSSY----DPHDPSLPNLPSTDQVIAEFDPS-PPHLRCANC 60

Query: 184  QGGLLRGLQSIICVFCGAQQEKQITPDPICFNTTFGYRWLLQSLDLDGSEPVGASY---- 351
            +G L RGLQSIICV+CG +Q+ ++ P+PI F  T G+RWLL++LDLDGSE +G S     
Sbjct: 61   RGRLPRGLQSIICVYCGLEQKGEVAPEPILFKNTAGFRWLLETLDLDGSEALGPSTVVKE 120

Query: 352  SNKGLNASKDAMVLSDLLNIEIKWPADSEKSVSDLANKAPNLMKNPLNVSGVDLDSFFFE 531
            +++G +A KD   LSDLL++EIKW ++SEK  + ++N+A    K+PLN++GVDLD+F  E
Sbjct: 121  ASRGRSALKDEGSLSDLLDLEIKWTSESEKLGAGVSNEASVRSKSPLNLAGVDLDNFLSE 180

Query: 532  TKKENVFSMSEEQLMTNKVVKFAEALAPPGQNNLSLFENTQSSEALSRPTAGAVDDPFSG 711
             +++ V   SEEQ    K ++  E+ A  G  NLSLFEN   SE + RP        FSG
Sbjct: 181  ARRDTVIKASEEQFAATKEIRSKESNALQGHENLSLFENVHPSETVVRPAEDKNSAAFSG 240

Query: 712  WEDEFQSAGVRTLSVESKSLDFFSEASPIEFSSSLETAVGLEAETKFGFDSIRNNVKENT 891
            WE EFQ+A   ++   SK  D F   S ++ SS ++   G       G D    +V ++T
Sbjct: 241  WEAEFQNANSESVHEGSKEFDPF-VGSTVDLSSHMDAVFG------SGKDINSAHVSDDT 293

Query: 892  TSVPHVSMNDCWVQDDQWHASSIVLSTKTAQVQIKIEGTKVGEPTDKTNSISSLDNNLFQ 1071
            T  P    ND W+QDD +      L++K      +++ T   E        SS  N+ FQ
Sbjct: 294  T--PASRTND-WIQDDLYKN----LNSKVPAHVGQVDSTIQAEDAQNLAGPSSTRNDWFQ 346

Query: 1072 DDLWQTGPEKHRE-------DDNSFDAWQDF---TXXXXXXXXXXXXXXXXXXXXXXXXX 1221
            DD W+    K  +       +DN FDAW DF   +                         
Sbjct: 347  DDQWKNSSAKSTDNKIALGKNDNLFDAWNDFPSSSTSQDPFRSSWKHNNGSSLTPSVEQT 406

Query: 1222 XXXXLVSSSHDFQEMEFGSFMSPDLFSGG--TSINDGSMAMNIVKEGSISDRLVEVNV-- 1389
                L+SS+ + QEMEFG+F   +  S G   + ND S   N++ E S S+R  + +   
Sbjct: 407  SEPNLLSSTSNLQEMEFGNFSQQEDLSSGADNNQNDSSTVSNMLPEASDSNRKADTSAED 466

Query: 1390 -GGVKSTENSNSSFDAAMWTESADNTVETLMSQMHDLSFMLDGNLSIPK 1533
             G ++ +       DA   T S    VE LMSQMHDLSFML+  LS+P+
Sbjct: 467  GGRLEQSVKDEDILDAT--TSSKAEDVEMLMSQMHDLSFMLESKLSVPQ 513


>ref|XP_002301615.1| predicted protein [Populus trichocarpa] gi|222843341|gb|EEE80888.1|
            predicted protein [Populus trichocarpa]
          Length = 518

 Score =  298 bits (763), Expect = 3e-78
 Identities = 200/535 (37%), Positives = 275/535 (51%), Gaps = 16/535 (2%)
 Frame = +1

Query: 4    EFPTDSINKLQITLRKQANIPPYFYNLEEEDPTFQKLPSVQEAIESLYPSLPPYLRCKQC 183
            E P D I +LQ++LRK+A +  Y  NLEE D           +I  + PS PPYLRCK C
Sbjct: 4    EIPDDDIRELQMSLRKEAGLSSY--NLEENDWLPDLASLNDSSISDIDPS-PPYLRCKNC 60

Query: 184  QGGLLRGLQSIICVFCGAQQEKQITPDPICFNTTFGYRWLLQSLDLDGSEPVGASYSNKG 363
            +G LLRG+ S ICVFCG Q  + I PDPI F +TFG RW LQSL LDGSE V +    K 
Sbjct: 61   KGRLLRGVNSTICVFCGRQHNQDIPPDPIKFMSTFGSRWFLQSLHLDGSEIVESIIEAKE 120

Query: 364  LN----ASKDAMVLSDLLNIEIKWPADSEKSVSDLANKAPNLMKNPLNVSGVDLDSFFFE 531
            LN     S++   LSDLL++EI+WP++SE+S + + +K P    + LN+ GVDL++FF E
Sbjct: 121  LNRRQSTSQNNFPLSDLLDLEIRWPSESERSETSVTDKTPAQNLSTLNLGGVDLNNFFGE 180

Query: 532  TKKENVFSMSEEQLMTNKVVKFAEALAPPGQNNLSLFENTQSSEALSRPTAGAVDDPFSG 711
             K ++V ++S+EQL  NK +      A  G  NLSLFEN Q SE +         D  SG
Sbjct: 181  PKVDSVPALSQEQLTLNKDMDATGGNAVQGHGNLSLFENVQPSETIGGSDKDVSGDWSSG 240

Query: 712  WEDEFQSAGVRTLSVESKSLDFFSEASPIEFSSSLETAVGLEAETKFGFDSIRNNVKENT 891
            WE EFQSA   T   ESK+ D F  +S ++ S+ +++  G         D       EN 
Sbjct: 241  WEAEFQSASSGTQHRESKTSDPFVSSSSVDLSAHMDSVFGPAK------DIFEGKTNENA 294

Query: 892  TSVPHVSMNDCWVQDDQWH--ASSIVLSTKTAQVQIKIEGTKVGEPTDKTNSISSLDNNL 1065
            TS    +      +DD W    + +    +  ++ I  EG   G     TN+ S ++ + 
Sbjct: 295  TSSASSAF-----KDDLWSIPGTGVTGQDELFKLDINDEG---GGKRGTTNNSSMMNVDW 346

Query: 1066 FQDDLWQTGPEKHR-------EDDNSFDAWQDF--TXXXXXXXXXXXXXXXXXXXXXXXX 1218
             +D+ WQT             E+D+SFDAW DF  +                        
Sbjct: 347  IEDNQWQTTTTSKSDENKTIDENDDSFDAWNDFSGSTSAQVPSNNSLKQDANHILPSVDQ 406

Query: 1219 XXXXXLVSSSHDFQEMEFGSFMSPDLFSGGTSINDGSMAMNIVK-EGSISDRLVEVNVGG 1395
                 L   S   Q+++FGSF  PD FSG  +  +GS  +N+++ E S+SDR+  VN   
Sbjct: 407  ESEINLFGGSSISQDVDFGSFSQPDFFSGTLNNQNGSSEVNVMQTETSVSDRINSVN--- 463

Query: 1396 VKSTENSNSSFDAAMWTESADNTVETLMSQMHDLSFMLDGNLSIPKKENRIDSLS 1560
                + +         T S  + VE LMSQMHDLSFML+ NLS+P+K     S S
Sbjct: 464  --QDDGNTEDLKKGENTRSKADEVEMLMSQMHDLSFMLESNLSVPQKIEPFSSSS 516


>ref|XP_002529332.1| hypothetical protein RCOM_1016710 [Ricinus communis]
            gi|223531203|gb|EEF33049.1| hypothetical protein
            RCOM_1016710 [Ricinus communis]
          Length = 467

 Score =  280 bits (715), Expect = 1e-72
 Identities = 178/469 (37%), Positives = 252/469 (53%), Gaps = 11/469 (2%)
 Frame = +1

Query: 4    EFPTDSINKLQITLRKQANIPPYFYNLEEEDPTFQKLPSVQEAIESLYPSLPPYLRCKQC 183
            E P D I +LQI+LRK+A +  Y    + EDP+   LPS+Q+AI  L PS P YLRCK C
Sbjct: 4    EMPYDQIKELQISLRKEAGLASY----DPEDPSLPNLPSLQDAISELEPS-PSYLRCKSC 58

Query: 184  QGGLLRGLQSIICVFCGAQQEKQITPDPICFNTTFGYRWLLQSLDLDGSEPV----GASY 351
             G LLRG+ S+ICVFCG QQ K + PDPI F +TFG RW   SLDLDGSE V     A+ 
Sbjct: 59   NGRLLRGVNSVICVFCGRQQNKDVPPDPIKFTSTFGCRWFFHSLDLDGSELVTPSAEANE 118

Query: 352  SNKGLNASKDAMVLSDLLNIEIKWPADSEKSVSDLANKAPNLMKNPLNVSGVDLDSFFFE 531
            SN+G N  +  + LSDLLN+EI+WP++ E+  +    K P  M   LN SG+D+D++F E
Sbjct: 119  SNRGQNTPEIHIPLSDLLNLEIRWPSEPEEFETSALEKKPIQM---LNFSGIDIDNYFTE 175

Query: 532  TKKENVFSMSEEQLMTNKVVKFAEALAPPGQNNLSLFENTQSSEALSRPTAGAVDDPFSG 711
            +K ++V + +E Q    +    AE  A  G  NLSLFE+ + SE  +R       D FSG
Sbjct: 176  SKLDSVSTSAEGQFTLKQHEDAAENNAFQGHENLSLFESVEPSETAARSKKDESGDSFSG 235

Query: 712  WEDEFQSAGVRTLSVESKSLDFFSEASPIEFSSSLETAVGLEAETKFGFDSIRNNVKENT 891
            WE +FQS+G +T   +S   D F  +S ++ SS ++   G       G +      KEN 
Sbjct: 236  WEADFQSSGAKTQHQKSNFPDPFVGSSSVDLSSHMDALFGP------GSNLSNEKTKENV 289

Query: 892  TSVPHVSMNDCWVQDDQWHASSIVLSTKTAQVQIKIEGTKVGEPTDKTNSISSLDNNLFQ 1071
            TS    +MND W + D    ++  ++ +  Q ++ +   + G   +  NS SS++ +  Q
Sbjct: 290  TSAS--NMND-WFERDTSSNANAGVAFQNDQFEVPVSDNRDGTVGNTGNS-SSMNVDWVQ 345

Query: 1072 DDLWQTGPEKHR-----EDDNSFDAWQDFT-XXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1233
            D+ WQT     +     E+D+SFD W DFT                              
Sbjct: 346  DNQWQTSSSSRKATDNDENDDSFDTWNDFTSSSNVQVPSNNSLKGDIHTVPSVEQGSEIS 405

Query: 1234 LVSSSHDFQEMEFGSFMSPDLFSGGTSINDGSMAMN-IVKEGSISDRLV 1377
              S + + ++++FGSF  PD FS   S  +GS  M+ +V E S+SDR V
Sbjct: 406  FFSGADNSKDIDFGSFSQPDFFSATFSNQNGSAEMSTMVPESSVSDRYV 454


>emb|CAN61787.1| hypothetical protein VITISV_006025 [Vitis vinifera]
          Length = 633

 Score =  263 bits (672), Expect = 1e-67
 Identities = 181/546 (33%), Positives = 260/546 (47%), Gaps = 61/546 (11%)
 Frame = +1

Query: 4    EFPTDSINKLQITLRKQANIPPYFYNLEEEDPTFQKLPSVQEAIESLYPSLPPYLRCKQC 183
            E P D + ++QI LRK AN+  Y    +  DP+   LPS  + I    PS PP+LRC  C
Sbjct: 6    EIPVDLVRQVQILLRKDANLSSY----DPHDPSLPNLPSTDQVIAEFDPS-PPHLRCANC 60

Query: 184  QGGLLRGLQSIICVFCGAQQEKQITPDPICFNTTFGYRWLLQSLDLDGSEPVGASYSN-- 357
            +G L RGLQSIICV+CG +Q+ ++ P+PI F  T G+RWLL++LDLDGS+P G    N  
Sbjct: 61   RGRLPRGLQSIICVYCGLEQKGEVAPEPILFKNTAGFRWLLETLDLDGSQPNGVLRLNFA 120

Query: 358  --------------------------------------------KGLNASKDAMVLSDLL 405
                                                        +G +A KD   LSDLL
Sbjct: 121  ILCSSSCSVLSIASGDSGVWALKFVLRRILERGLGPSTVVKEASRGRSALKDEGSLSDLL 180

Query: 406  NIEIKWPADSEKSVSDLANKAPNLMKNPLNVSGVDLDSFFFETKKENVFSMSEEQLMTNK 585
            ++EIKW ++SEK  + ++N+A    K+PLN++GVDLD+F  E +++ V   SEEQ    K
Sbjct: 181  DLEIKWTSESEKLGAGVSNEASVRSKSPLNLAGVDLDNFLSEARRDTVIKASEEQFAATK 240

Query: 586  VVKFAEALAPPGQNNLSLFENTQSSEALSRPTAGAVDDPFSGWEDEFQSAGVRTLSVESK 765
             ++  E+ A  G  NLSLFEN   SE + RP        FSGWE EFQ+A   ++   SK
Sbjct: 241  EIRSKESNALQGHENLSLFENVHPSETVVRPAEDKNSAAFSGWEAEFQNANSESVHEGSK 300

Query: 766  SLDFFSEASPIEFSSSLETAVGLEAETKFGFDSIRNNVKENTTSVPHVSMNDCWVQDDQW 945
              D F   S ++ SS ++   G       G D    +V ++TT  P    ND W+QDD +
Sbjct: 301  EFDPF-VGSTVDLSSHMDAVFG------SGKDINSAHVSDDTT--PASRTND-WIQDDLY 350

Query: 946  HASSIVLSTKTAQVQIKIEGTKVGEPTDKTNSISSLDNNLFQDDLWQTGPEKHRE----- 1110
                  L++K      +++ T   E        SS  N+ FQDD W+    K  +     
Sbjct: 351  KN----LNSKVPAHVGQVDSTIQAEDAQNLAGPSSTRNDWFQDDQWKNSSAKSTDNKIAL 406

Query: 1111 --DDNSFDAWQDF---TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSSSHDFQEMEFG 1275
              +DN FDAW DF   +                             L+SS+ + QEMEFG
Sbjct: 407  GKNDNLFDAWNDFPSSSTSQDPFRSSWKHNNGSSLTPSVEQTSEPNLLSSTSNLQEMEFG 466

Query: 1276 SFMSPDLFSGG--TSINDGSMAMNIVKEGSISDRLVEVNV---GGVKSTENSNSSFDAAM 1440
            +F   +  S G   + ND S   N++ E S S+R  + +    G ++ +       DA  
Sbjct: 467  NFSQQEDLSSGADNNQNDSSTVSNMLPEASDSNRKADTSAEDGGRLEQSVKDEDILDATT 526

Query: 1441 WTESAD 1458
             +++ D
Sbjct: 527  SSKAED 532


>ref|XP_003628559.1| GD3A [Medicago truncatula] gi|355522581|gb|AET03035.1| GD3A [Medicago
            truncatula]
          Length = 742

 Score =  227 bits (578), Expect = 1e-56
 Identities = 152/396 (38%), Positives = 218/396 (55%), Gaps = 15/396 (3%)
 Frame = +1

Query: 4    EFPTDSINKLQITLRKQANIPPYFYNLE-EEDPTFQKLPSVQEAIESLYPSLPPYLRCKQ 180
            E P D I +LQI LRK AN+   +YN E +E+     L SV E +  L PS PPYLRCK 
Sbjct: 4    ELPIDQIKQLQILLRKDANLS--WYNPENDENLPLPNLHSVAETVAKLDPS-PPYLRCKN 60

Query: 181  CQGGLLRGLQSIICVFCGAQQEKQITPDPICFNTTFGYRWLLQSLDLDGSEPVGASY--- 351
            C G LLRG+QS ICVFCGA   K + P+ I F  T GYRWLL+SL LDGSE V  +    
Sbjct: 61   CNGRLLRGVQSFICVFCGANPHKDLPPEAIKFKNTLGYRWLLESLQLDGSEMVAPTVEEH 120

Query: 352  -SNKGLNASKDAMVLSDLLNIEIKWPADSEKSVSDLANKAPNLMKNPLNVSGVDLDSFFF 528
             S++  +   D + LS+LL++EI+WP+++E+++S  ++      ++ L++SGVDLDSFF 
Sbjct: 121  ASSRTRSELNDEIPLSELLDLEIRWPSEAERALSSNSDSEAFPGESSLSLSGVDLDSFF- 179

Query: 529  ETKKENVFSMSEEQLMTNKVVKFAEALAPPGQNNLSLFENTQSSEALSRPTAGAVDD--- 699
              ++E+ F++SE+     + V  A         NLSLF+N Q+SEA    + G+V+D   
Sbjct: 180  -DRRESDFNVSEQNSAFERNVGGASDNTFQANENLSLFQNFQASEA----SGGSVEDQSG 234

Query: 700  -PFSGWEDEFQSAGVRTLSVESKSLDFFSEASPIEFSSSLETAVGLEAETKFGFDSIRNN 876
              FSGWE  F+SA    +  ES S+D               + V L+  + +G DS  + 
Sbjct: 235  GSFSGWEANFKSASSAPVHKESNSVD--------------HSKVELDTVSGYGKDS--DG 278

Query: 877  VKENTTSVPHVSMNDCWVQDDQWHASSIVLSTKTAQVQIKIEGTKVGEPTDKTNSISSLD 1056
            VKEN    P  S  D W Q D++  S+  +  +  + +   +   + +    T S S+ +
Sbjct: 279  VKENDDFNPSASGEDDWFQGDEFQTSNSKIDGQPGKSETTTDLYHMEKEEIATGS-STRN 337

Query: 1057 NNLFQDDLWQTGPEK------HREDDNSFDAWQDFT 1146
             +  QDD WQ    K        E+D+SFDAW DFT
Sbjct: 338  LDWMQDDQWQESETKIPNIGATDEEDDSFDAWNDFT 373


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