BLASTX nr result

ID: Coptis24_contig00007294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007294
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171616.1| PREDICTED: 40S ribosomal protein S21-2-like ...   149   3e-34
gb|AEC10964.1| 40S ribosomal protein s21e [Camellia sinensis]         149   3e-34
ref|XP_002512424.1| 40S ribosomal protein S21e, putative [Ricinu...   149   3e-34
ref|XP_002273516.1| PREDICTED: 40S ribosomal protein S21-2 isofo...   149   3e-34
emb|CAN60816.1| hypothetical protein VITISV_033219 [Vitis vinifera]   148   4e-34

>ref|XP_004171616.1| PREDICTED: 40S ribosomal protein S21-2-like isoform 2 [Cucumis
           sativus]
          Length = 82

 Score =  149 bits (376), Expect = 3e-34
 Identities = 70/82 (85%), Positives = 78/82 (95%)
 Frame = +1

Query: 88  MQNEEGFNTDLYIPRKCSATNRLITSKDHASVQINVGHLDVDGLYTGKFSTFALCGYVRA 267
           MQNEEG  T+LYIPRKCSATNRLITSKDHASVQIN+GHLD +G+YTG+FSTFALCG++RA
Sbjct: 1   MQNEEGKITELYIPRKCSATNRLITSKDHASVQINIGHLDENGIYTGQFSTFALCGFIRA 60

Query: 268 QGDADSAVDRLWQKKKVEVGQQ 333
           QGDADSA+DRLWQKKKVEV QQ
Sbjct: 61  QGDADSALDRLWQKKKVEVRQQ 82


>gb|AEC10964.1| 40S ribosomal protein s21e [Camellia sinensis]
          Length = 82

 Score =  149 bits (375), Expect = 3e-34
 Identities = 70/82 (85%), Positives = 77/82 (93%)
 Frame = +1

Query: 88  MQNEEGFNTDLYIPRKCSATNRLITSKDHASVQINVGHLDVDGLYTGKFSTFALCGYVRA 267
           MQNEEG N DLYIPRKCSATNRLIT+KDHASVQINVGHLD +G+YTG+F+TFALCG+VRA
Sbjct: 1   MQNEEGQNMDLYIPRKCSATNRLITAKDHASVQINVGHLDENGIYTGQFTTFALCGFVRA 60

Query: 268 QGDADSAVDRLWQKKKVEVGQQ 333
           QGDADSAVDRLWQKKK E+ QQ
Sbjct: 61  QGDADSAVDRLWQKKKTELRQQ 82


>ref|XP_002512424.1| 40S ribosomal protein S21e, putative [Ricinus communis]
           gi|223548385|gb|EEF49876.1| 40S ribosomal protein S21e,
           putative [Ricinus communis] gi|313586443|gb|ADR71232.1|
           40S ribosomal protein S21A [Hevea brasiliensis]
          Length = 82

 Score =  149 bits (375), Expect = 3e-34
 Identities = 70/82 (85%), Positives = 77/82 (93%)
 Frame = +1

Query: 88  MQNEEGFNTDLYIPRKCSATNRLITSKDHASVQINVGHLDVDGLYTGKFSTFALCGYVRA 267
           MQNEEG N DLYIPRKCSATNRLITSKDHASVQIN+GHLD +G YTG+F+TFALCG+VRA
Sbjct: 1   MQNEEGQNMDLYIPRKCSATNRLITSKDHASVQINIGHLDANGHYTGQFTTFALCGFVRA 60

Query: 268 QGDADSAVDRLWQKKKVEVGQQ 333
           QGDADSA+DRLWQKKKVE+ QQ
Sbjct: 61  QGDADSALDRLWQKKKVELRQQ 82


>ref|XP_002273516.1| PREDICTED: 40S ribosomal protein S21-2 isoform 1 [Vitis vinifera]
           gi|147862660|emb|CAN83594.1| hypothetical protein
           VITISV_037724 [Vitis vinifera]
           gi|297736874|emb|CBI26075.3| unnamed protein product
           [Vitis vinifera]
          Length = 82

 Score =  149 bits (375), Expect = 3e-34
 Identities = 70/81 (86%), Positives = 76/81 (93%)
 Frame = +1

Query: 88  MQNEEGFNTDLYIPRKCSATNRLITSKDHASVQINVGHLDVDGLYTGKFSTFALCGYVRA 267
           MQNEEG N DLYIPRKCSATNRLITSKDHASVQIN+GH+D DG++TG+FSTFALCG+VRA
Sbjct: 1   MQNEEGQNMDLYIPRKCSATNRLITSKDHASVQINIGHVDEDGVFTGQFSTFALCGFVRA 60

Query: 268 QGDADSAVDRLWQKKKVEVGQ 330
           QGDADSAVDRLWQKKK EV Q
Sbjct: 61  QGDADSAVDRLWQKKKAEVRQ 81


>emb|CAN60816.1| hypothetical protein VITISV_033219 [Vitis vinifera]
          Length = 82

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/82 (86%), Positives = 75/82 (91%)
 Frame = +1

Query: 88  MQNEEGFNTDLYIPRKCSATNRLITSKDHASVQINVGHLDVDGLYTGKFSTFALCGYVRA 267
           MQNEEG N DLYIPRKCSATNRLITSKDHASVQINVGHLD  G YTG+F+TFALCG+VRA
Sbjct: 1   MQNEEGQNMDLYIPRKCSATNRLITSKDHASVQINVGHLDESGTYTGQFTTFALCGFVRA 60

Query: 268 QGDADSAVDRLWQKKKVEVGQQ 333
           QGDADSA+DRLWQKKK EV QQ
Sbjct: 61  QGDADSALDRLWQKKKAEVRQQ 82


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