BLASTX nr result

ID: Coptis24_contig00007287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007287
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297648.1| predicted protein [Populus trichocarpa] gi|1...    55   6e-06
ref|XP_002530866.1| Disease resistance response protein, putativ...    55   8e-06
gb|ABK94138.1| unknown [Populus trichocarpa]                           55   8e-06

>ref|XP_002297648.1| predicted protein [Populus trichocarpa] gi|118484908|gb|ABK94320.1|
           unknown [Populus trichocarpa]
           gi|222844906|gb|EEE82453.1| predicted protein [Populus
           trichocarpa]
          Length = 195

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = +1

Query: 1   FARGYVQARTHSLDINSGDACVEYSVYVMHY 93
           FARGYVQARTH LD+ +GDA VEY+VYV HY
Sbjct: 165 FARGYVQARTHKLDMATGDATVEYNVYVFHY 195


>ref|XP_002530866.1| Disease resistance response protein, putative [Ricinus communis]
           gi|223529555|gb|EEF31506.1| Disease resistance response
           protein, putative [Ricinus communis]
          Length = 132

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 22/31 (70%), Positives = 28/31 (90%)
 Frame = +1

Query: 1   FARGYVQARTHSLDINSGDACVEYSVYVMHY 93
           FARGYVQA+TH LD+ +GDA VEY++YV+HY
Sbjct: 102 FARGYVQAKTHKLDLATGDAVVEYNIYVLHY 132


>gb|ABK94138.1| unknown [Populus trichocarpa]
          Length = 157

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = +1

Query: 1   FARGYVQARTHSLDINSGDACVEYSVYVMHY 93
           FARGYVQARTH +D+ +GDA VEY+VYV HY
Sbjct: 127 FARGYVQARTHMVDLKTGDATVEYNVYVFHY 157


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