BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007271
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529112.1| lupus la ribonucleoprotein, putative [Ricinu...    91   2e-16
ref|XP_003632090.1| PREDICTED: uncharacterized protein LOC100259...    84   2e-14
emb|CBI24756.3| unnamed protein product [Vitis vinifera]               84   2e-14
ref|XP_002275950.1| PREDICTED: uncharacterized protein LOC100259...    84   2e-14
ref|XP_002881943.1| hypothetical protein ARALYDRAFT_322062 [Arab...    69   7e-10

>ref|XP_002529112.1| lupus la ribonucleoprotein, putative [Ricinus communis]
           gi|223531463|gb|EEF33296.1| lupus la ribonucleoprotein,
           putative [Ricinus communis]
          Length = 524

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 61/161 (37%), Positives = 82/161 (50%), Gaps = 6/161 (3%)
 Frame = -2

Query: 608 KSLQTRGRKSGNEGEGNAEDN-LSTSDQL--NKHMEDST---DMTSHEHTVDFSIPDKDG 447
           K  Q RG+K G++G+G++E+  +STS+Q    K +ED +   D  SHEH+ +  + +KDG
Sbjct: 393 KPTQARGKK-GHDGQGHSEEEEVSTSEQPPNEKQIEDPSQQYDGHSHEHSGEDHVNEKDG 451

Query: 446 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQLQNSRGSHVGTP 267
                                                             N+RG+HVGTP
Sbjct: 452 AQRKGRNRGRGKGRGRGQYH-----------------------------HNNRGNHVGTP 482

Query: 266 PASNPVNNEQLSAAKQLPGPRMPDGTKGFTMGRGKPVVSDI 144
           P++N + NEQ S AKQ PGPRMPDGTKGF MGRGKPV  +I
Sbjct: 483 PSNNLIINEQPSMAKQPPGPRMPDGTKGFAMGRGKPVAVNI 523


>ref|XP_003632090.1| PREDICTED: uncharacterized protein LOC100259405 isoform 2 [Vitis
           vinifera]
          Length = 438

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 59/157 (37%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
 Frame = -2

Query: 608 KSLQTRGRKSGNEGEGNAE-DNLSTSDQL-NKHMEDSTDMTSHEHTVDFSIPDKDGXXXX 435
           KS Q R RK G+EGE   E D+  TS+QL N    +  D+ SHEH  +  I DK+G    
Sbjct: 311 KSAQARSRK-GHEGEAICEEDDACTSEQLPNDKQPEDPDVHSHEHAGEEHINDKEGAQRK 369

Query: 434 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQLQNSRGSHVGTPPASN 255
                                                          +RG+HVGTPP S+
Sbjct: 370 GRSRGRGKGRGRGQYHH----------------------------HGNRGNHVGTPPNSS 401

Query: 254 PVNNEQLSAAKQLPGPRMPDGTKGFTMGRGKPVVSDI 144
            +N+EQ + AK  PGPRMPDGT+GF+MGRGKPV  +I
Sbjct: 402 -INHEQPAVAKPPPGPRMPDGTRGFSMGRGKPVAVNI 437


>emb|CBI24756.3| unnamed protein product [Vitis vinifera]
          Length = 325

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 59/157 (37%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
 Frame = -2

Query: 608 KSLQTRGRKSGNEGEGNAE-DNLSTSDQL-NKHMEDSTDMTSHEHTVDFSIPDKDGXXXX 435
           KS Q R RK G+EGE   E D+  TS+QL N    +  D+ SHEH  +  I DK+G    
Sbjct: 198 KSAQARSRK-GHEGEAICEEDDACTSEQLPNDKQPEDPDVHSHEHAGEEHINDKEGAQRK 256

Query: 434 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQLQNSRGSHVGTPPASN 255
                                                          +RG+HVGTPP S+
Sbjct: 257 GRSRGRGKGRGRGQYHH----------------------------HGNRGNHVGTPPNSS 288

Query: 254 PVNNEQLSAAKQLPGPRMPDGTKGFTMGRGKPVVSDI 144
            +N+EQ + AK  PGPRMPDGT+GF+MGRGKPV  +I
Sbjct: 289 -INHEQPAVAKPPPGPRMPDGTRGFSMGRGKPVAVNI 324


>ref|XP_002275950.1| PREDICTED: uncharacterized protein LOC100259405 isoform 1 [Vitis
           vinifera]
          Length = 454

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 59/157 (37%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
 Frame = -2

Query: 608 KSLQTRGRKSGNEGEGNAE-DNLSTSDQL-NKHMEDSTDMTSHEHTVDFSIPDKDGXXXX 435
           KS Q R RK G+EGE   E D+  TS+QL N    +  D+ SHEH  +  I DK+G    
Sbjct: 327 KSAQARSRK-GHEGEAICEEDDACTSEQLPNDKQPEDPDVHSHEHAGEEHINDKEGAQRK 385

Query: 434 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQLQNSRGSHVGTPPASN 255
                                                          +RG+HVGTPP S+
Sbjct: 386 GRSRGRGKGRGRGQYHH----------------------------HGNRGNHVGTPPNSS 417

Query: 254 PVNNEQLSAAKQLPGPRMPDGTKGFTMGRGKPVVSDI 144
            +N+EQ + AK  PGPRMPDGT+GF+MGRGKPV  +I
Sbjct: 418 -INHEQPAVAKPPPGPRMPDGTRGFSMGRGKPVAVNI 453


>ref|XP_002881943.1| hypothetical protein ARALYDRAFT_322062 [Arabidopsis lyrata subsp.
           lyrata] gi|297327782|gb|EFH58202.1| hypothetical protein
           ARALYDRAFT_322062 [Arabidopsis lyrata subsp. lyrata]
          Length = 534

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 5/53 (9%)
 Frame = -2

Query: 296 NSRGSH---VGTPPASNPVNN-EQLSAAKQLP-GPRMPDGTKGFTMGRGKPVV 153
           N RG+H   VGTPP++NP+NN EQ    KQ P GPRMPDGT+GF+MGRGKPV+
Sbjct: 478 NGRGNHHHQVGTPPSNNPMNNMEQPGMGKQQPPGPRMPDGTRGFSMGRGKPVM 530