BLASTX nr result
ID: Coptis24_contig00007271
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00007271 (612 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002529112.1| lupus la ribonucleoprotein, putative [Ricinu... 91 2e-16 ref|XP_003632090.1| PREDICTED: uncharacterized protein LOC100259... 84 2e-14 emb|CBI24756.3| unnamed protein product [Vitis vinifera] 84 2e-14 ref|XP_002275950.1| PREDICTED: uncharacterized protein LOC100259... 84 2e-14 ref|XP_002881943.1| hypothetical protein ARALYDRAFT_322062 [Arab... 69 7e-10 >ref|XP_002529112.1| lupus la ribonucleoprotein, putative [Ricinus communis] gi|223531463|gb|EEF33296.1| lupus la ribonucleoprotein, putative [Ricinus communis] Length = 524 Score = 90.9 bits (224), Expect = 2e-16 Identities = 61/161 (37%), Positives = 82/161 (50%), Gaps = 6/161 (3%) Frame = -2 Query: 608 KSLQTRGRKSGNEGEGNAEDN-LSTSDQL--NKHMEDST---DMTSHEHTVDFSIPDKDG 447 K Q RG+K G++G+G++E+ +STS+Q K +ED + D SHEH+ + + +KDG Sbjct: 393 KPTQARGKK-GHDGQGHSEEEEVSTSEQPPNEKQIEDPSQQYDGHSHEHSGEDHVNEKDG 451 Query: 446 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQLQNSRGSHVGTP 267 N+RG+HVGTP Sbjct: 452 AQRKGRNRGRGKGRGRGQYH-----------------------------HNNRGNHVGTP 482 Query: 266 PASNPVNNEQLSAAKQLPGPRMPDGTKGFTMGRGKPVVSDI 144 P++N + NEQ S AKQ PGPRMPDGTKGF MGRGKPV +I Sbjct: 483 PSNNLIINEQPSMAKQPPGPRMPDGTKGFAMGRGKPVAVNI 523 >ref|XP_003632090.1| PREDICTED: uncharacterized protein LOC100259405 isoform 2 [Vitis vinifera] Length = 438 Score = 84.0 bits (206), Expect = 2e-14 Identities = 59/157 (37%), Positives = 75/157 (47%), Gaps = 2/157 (1%) Frame = -2 Query: 608 KSLQTRGRKSGNEGEGNAE-DNLSTSDQL-NKHMEDSTDMTSHEHTVDFSIPDKDGXXXX 435 KS Q R RK G+EGE E D+ TS+QL N + D+ SHEH + I DK+G Sbjct: 311 KSAQARSRK-GHEGEAICEEDDACTSEQLPNDKQPEDPDVHSHEHAGEEHINDKEGAQRK 369 Query: 434 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQLQNSRGSHVGTPPASN 255 +RG+HVGTPP S+ Sbjct: 370 GRSRGRGKGRGRGQYHH----------------------------HGNRGNHVGTPPNSS 401 Query: 254 PVNNEQLSAAKQLPGPRMPDGTKGFTMGRGKPVVSDI 144 +N+EQ + AK PGPRMPDGT+GF+MGRGKPV +I Sbjct: 402 -INHEQPAVAKPPPGPRMPDGTRGFSMGRGKPVAVNI 437 >emb|CBI24756.3| unnamed protein product [Vitis vinifera] Length = 325 Score = 84.0 bits (206), Expect = 2e-14 Identities = 59/157 (37%), Positives = 75/157 (47%), Gaps = 2/157 (1%) Frame = -2 Query: 608 KSLQTRGRKSGNEGEGNAE-DNLSTSDQL-NKHMEDSTDMTSHEHTVDFSIPDKDGXXXX 435 KS Q R RK G+EGE E D+ TS+QL N + D+ SHEH + I DK+G Sbjct: 198 KSAQARSRK-GHEGEAICEEDDACTSEQLPNDKQPEDPDVHSHEHAGEEHINDKEGAQRK 256 Query: 434 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQLQNSRGSHVGTPPASN 255 +RG+HVGTPP S+ Sbjct: 257 GRSRGRGKGRGRGQYHH----------------------------HGNRGNHVGTPPNSS 288 Query: 254 PVNNEQLSAAKQLPGPRMPDGTKGFTMGRGKPVVSDI 144 +N+EQ + AK PGPRMPDGT+GF+MGRGKPV +I Sbjct: 289 -INHEQPAVAKPPPGPRMPDGTRGFSMGRGKPVAVNI 324 >ref|XP_002275950.1| PREDICTED: uncharacterized protein LOC100259405 isoform 1 [Vitis vinifera] Length = 454 Score = 84.0 bits (206), Expect = 2e-14 Identities = 59/157 (37%), Positives = 75/157 (47%), Gaps = 2/157 (1%) Frame = -2 Query: 608 KSLQTRGRKSGNEGEGNAE-DNLSTSDQL-NKHMEDSTDMTSHEHTVDFSIPDKDGXXXX 435 KS Q R RK G+EGE E D+ TS+QL N + D+ SHEH + I DK+G Sbjct: 327 KSAQARSRK-GHEGEAICEEDDACTSEQLPNDKQPEDPDVHSHEHAGEEHINDKEGAQRK 385 Query: 434 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQLQNSRGSHVGTPPASN 255 +RG+HVGTPP S+ Sbjct: 386 GRSRGRGKGRGRGQYHH----------------------------HGNRGNHVGTPPNSS 417 Query: 254 PVNNEQLSAAKQLPGPRMPDGTKGFTMGRGKPVVSDI 144 +N+EQ + AK PGPRMPDGT+GF+MGRGKPV +I Sbjct: 418 -INHEQPAVAKPPPGPRMPDGTRGFSMGRGKPVAVNI 453 >ref|XP_002881943.1| hypothetical protein ARALYDRAFT_322062 [Arabidopsis lyrata subsp. lyrata] gi|297327782|gb|EFH58202.1| hypothetical protein ARALYDRAFT_322062 [Arabidopsis lyrata subsp. lyrata] Length = 534 Score = 68.9 bits (167), Expect = 7e-10 Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 5/53 (9%) Frame = -2 Query: 296 NSRGSH---VGTPPASNPVNN-EQLSAAKQLP-GPRMPDGTKGFTMGRGKPVV 153 N RG+H VGTPP++NP+NN EQ KQ P GPRMPDGT+GF+MGRGKPV+ Sbjct: 478 NGRGNHHHQVGTPPSNNPMNNMEQPGMGKQQPPGPRMPDGTRGFSMGRGKPVM 530