BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007253
         (1150 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276868.1| PREDICTED: nuclear cap-binding protein subun...   306   5e-81
gb|AFK38601.1| unknown [Lotus japonicus]                              305   1e-80
ref|XP_004137136.1| PREDICTED: nuclear cap-binding protein subun...   304   3e-80
ref|XP_003543324.1| PREDICTED: nuclear cap-binding protein subun...   300   3e-79
gb|ACN43580.1| nuclear cap-binding protein [Solanum tuberosum]        300   6e-79

>ref|XP_002276868.1| PREDICTED: nuclear cap-binding protein subunit 2-like isoform 1
           [Vitis vinifera] gi|359485224|ref|XP_003633238.1|
           PREDICTED: nuclear cap-binding protein subunit 2-like
           isoform 2 [Vitis vinifera]
           gi|359485226|ref|XP_003633239.1| PREDICTED: nuclear
           cap-binding protein subunit 2-like isoform 3 [Vitis
           vinifera]
          Length = 253

 Score =  306 bits (785), Expect = 5e-81
 Identities = 156/255 (61%), Positives = 181/255 (70%)
 Frame = +3

Query: 33  FQDPNKISAYRDRRFPGSQEEFDVALQTSTTVYVGNMSFYTTEEQVYELFTRAGEIKKII 212
           F+DP+K+SAYRD+RFPG+QE+F+ AL TS TVY+GNMSFYTTEEQVYELF+RAGEIKKII
Sbjct: 5   FKDPSKLSAYRDKRFPGTQEDFEHALLTSMTVYIGNMSFYTTEEQVYELFSRAGEIKKII 64

Query: 213 MGLDKNTKTPCGFCFVLYYSREDAEDSVKYISGTILDDRPIRVDFDWGFXXXXXXXXXXX 392
           MGLDKN+KTPCGFCFVLYYSR+DAED+VKYISGT+LDDRPIRVDFDWGF           
Sbjct: 65  MGLDKNSKTPCGFCFVLYYSRDDAEDAVKYISGTVLDDRPIRVDFDWGFQEGRQWGRGRS 124

Query: 393 XXXVRDEYRTDYDPGRGGYGKLVQQELEAQRQLVDYGTGSLGSFQQFVPSHYXXXXXXXX 572
              VRDEYRTDYDPGRGGYGKLVQ+ELEAQRQLVDYG+GSLGSF   +PS Y        
Sbjct: 125 GGQVRDEYRTDYDPGRGGYGKLVQRELEAQRQLVDYGSGSLGSFPPVMPSQY------GR 178

Query: 573 XXXXXXXXXSHRQNXXXXXXXXXXXXXXGPEKSRRFSGNESRRVSEHERRQEKNPRFRXX 752
                    S+R +                + S+R S ++SRR S+H+ R EKNPRFR  
Sbjct: 179 HGGSQGHGGSNRHSRDYPRKRHRDDDRHSHDFSKRTSDHDSRRNSDHDSRPEKNPRFRES 238

Query: 753 XXXXXXXXXXQKRGP 797
                     +KR P
Sbjct: 239 GDSDDEEEDDRKRRP 253


>gb|AFK38601.1| unknown [Lotus japonicus]
          Length = 253

 Score =  305 bits (781), Expect = 1e-80
 Identities = 157/238 (65%), Positives = 171/238 (71%)
 Frame = +3

Query: 33  FQDPNKISAYRDRRFPGSQEEFDVALQTSTTVYVGNMSFYTTEEQVYELFTRAGEIKKII 212
           F+D  K+SAYRDRRFPG+Q+EF+ AL  STTVYVGNMSFYTTEEQVYELF+RAGEIKKII
Sbjct: 5   FKDLTKLSAYRDRRFPGTQDEFEQALLASTTVYVGNMSFYTTEEQVYELFSRAGEIKKII 64

Query: 213 MGLDKNTKTPCGFCFVLYYSREDAEDSVKYISGTILDDRPIRVDFDWGFXXXXXXXXXXX 392
           MGLDKNTKTPCGFCFVLYYSRED ED+ KY+SGTILDDRPIRVDFDWGF           
Sbjct: 65  MGLDKNTKTPCGFCFVLYYSREDTEDACKYVSGTILDDRPIRVDFDWGFQEGRQWGRGRS 124

Query: 393 XXXVRDEYRTDYDPGRGGYGKLVQQELEAQRQLVDYGTGSLGSFQQFVPSHYXXXXXXXX 572
              VRDEYRTDYDPGRGGYGKLVQ+ELEAQRQLVDYG+GSLGSF   V + Y        
Sbjct: 125 GGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGSGSLGSFPPMVSTSY------GR 178

Query: 573 XXXXXXXXXSHRQNXXXXXXXXXXXXXXGPEKSRRFSGNESRRVSEHERRQEKNPRFR 746
                    SHR                  E S+R S +ESRR S+HE R EKNPRFR
Sbjct: 179 HGRNHGHGGSHRPGRDYHRKRHRDDDHHTNESSKRTSDHESRRNSDHESRPEKNPRFR 236


>ref|XP_004137136.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Cucumis
           sativus] gi|449476391|ref|XP_004154724.1| PREDICTED:
           nuclear cap-binding protein subunit 2-like [Cucumis
           sativus]
          Length = 251

 Score =  304 bits (778), Expect = 3e-80
 Identities = 159/238 (66%), Positives = 171/238 (71%)
 Frame = +3

Query: 33  FQDPNKISAYRDRRFPGSQEEFDVALQTSTTVYVGNMSFYTTEEQVYELFTRAGEIKKII 212
           F+DP K+S YRDRRF GSQ+EF+VALQTSTTVYVGNMSFYTTEEQVYELF+RAGEIKKII
Sbjct: 5   FKDPTKLSIYRDRRFHGSQDEFEVALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKII 64

Query: 213 MGLDKNTKTPCGFCFVLYYSREDAEDSVKYISGTILDDRPIRVDFDWGFXXXXXXXXXXX 392
           MGLDKN+KTPCGFCFVLYYSRED ED+VKYISGTILDDRPIRVDFDWGF           
Sbjct: 65  MGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQDGRQWGRGRS 124

Query: 393 XXXVRDEYRTDYDPGRGGYGKLVQQELEAQRQLVDYGTGSLGSFQQFVPSHYXXXXXXXX 572
              VRDEYRTDYDPGRGGYGKLVQ+ELEAQRQLVDYGTGSLGS    +P  Y        
Sbjct: 125 GGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGSMAPVMP-QYGKHGGSHG 183

Query: 573 XXXXXXXXXSHRQNXXXXXXXXXXXXXXGPEKSRRFSGNESRRVSEHERRQEKNPRFR 746
                     HR+                 E S+R S  ESRR S +E R EKNPRFR
Sbjct: 184 HGNRHGRDYHHRKR-------YRDDDRHAHESSKRTSDYESRRNSNYESRPEKNPRFR 234


>ref|XP_003543324.1| PREDICTED: nuclear cap-binding protein subunit 2-like [Glycine max]
          Length = 258

 Score =  300 bits (769), Expect = 3e-79
 Identities = 157/241 (65%), Positives = 170/241 (70%), Gaps = 3/241 (1%)
 Frame = +3

Query: 33  FQDPNKISAYRDRRFPGSQEEFDVALQTSTTVYVGNMSFYTTEEQVYELFTRAGEIKKII 212
           F+DP+KISAYRDRRFPG+QEEF+ AL TSTTVYVGNMSFYTTEEQVYELF+R GEIKKII
Sbjct: 5   FKDPSKISAYRDRRFPGTQEEFEHALVTSTTVYVGNMSFYTTEEQVYELFSRTGEIKKII 64

Query: 213 MGLDKNTKTPCGFCFVLYYSREDAEDSVKYISGTILDDRPIRVDFDWGFXXXXXXXXXXX 392
           MGLDKNTKTPCGFCFVLYYSRED ED+ KYISGTILDDRPIRVDFDWGF           
Sbjct: 65  MGLDKNTKTPCGFCFVLYYSREDTEDACKYISGTILDDRPIRVDFDWGFQEGRQWGRGRS 124

Query: 393 XXXVRDEYRTDYDPG---RGGYGKLVQQELEAQRQLVDYGTGSLGSFQQFVPSHYXXXXX 563
              VRDEYRTDYDP     GGYGKLVQ+ELE QRQLVDYG GSLGSF   +P+ Y     
Sbjct: 125 GGQVRDEYRTDYDPDILLLGGYGKLVQKELEVQRQLVDYGAGSLGSFPPVIPTSY----G 180

Query: 564 XXXXXXXXXXXXSHRQNXXXXXXXXXXXXXXGPEKSRRFSGNESRRVSEHERRQEKNPRF 743
                       SHR                  E S+R S +ESRR ++HE R EKNPRF
Sbjct: 181 RHGGGGGHGHGGSHRHGRDYYRKRHRDDERHTHESSKRTSDHESRRNTDHESRPEKNPRF 240

Query: 744 R 746
           R
Sbjct: 241 R 241


>gb|ACN43580.1| nuclear cap-binding protein [Solanum tuberosum]
          Length = 255

 Score =  300 bits (767), Expect = 6e-79
 Identities = 155/239 (64%), Positives = 172/239 (71%), Gaps = 1/239 (0%)
 Frame = +3

Query: 33  FQDPNKISAYRDRRFPGSQEEFDVALQTSTTVYVGNMSFYTTEEQVYELFTRAGEIKKII 212
           F+D  KISAYRDRRFPG+QEEF+ AL  S TVYVGNMSFYTTEEQVYELF+RAGEIKKI+
Sbjct: 5   FKDLAKISAYRDRRFPGTQEEFEDALLRSITVYVGNMSFYTTEEQVYELFSRAGEIKKIV 64

Query: 213 MGLDKNTKTPCGFCFVLYYSREDAEDSVKYISGTILDDRPIRVDFDWGFXXXXXXXXXXX 392
           MGLDKN+KTPCGFCF++YYSR+DAEDSVKYISGTILDDRPIRVDFDWGF           
Sbjct: 65  MGLDKNSKTPCGFCFIMYYSRDDAEDSVKYISGTILDDRPIRVDFDWGFQEGRQWGRGRS 124

Query: 393 XXXVRDEYRTDYDPGRGGYGKLVQQELEAQRQLVDYGTGSLGSFQQFVPS-HYXXXXXXX 569
              VRDEYRTDYDPGRGGYGKLVQ+ELEAQRQLVDYGTGSLG++   +PS HY       
Sbjct: 125 GGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGTGSLGAYPPVMPSPHY-----GR 179

Query: 570 XXXXXXXXXXSHRQNXXXXXXXXXXXXXXGPEKSRRFSGNESRRVSEHERRQEKNPRFR 746
                     S+R                 P+  +R    ESRR S+HE R EKNPRFR
Sbjct: 180 HNGGNHGRGGSYRHGREYHRKRHREDDHHRPDYPKRTYDRESRRNSDHESRPEKNPRFR 238