BLASTX nr result

ID: Coptis24_contig00007243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007243
         (2597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein lig...   841   0.0  
emb|CBI38350.3| unnamed protein product [Vitis vinifera]              841   0.0  
emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera]   831   0.0  
ref|XP_002315117.1| predicted protein [Populus trichocarpa] gi|2...   828   0.0  
ref|XP_002312201.1| predicted protein [Populus trichocarpa] gi|2...   828   0.0  

>ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Vitis
            vinifera]
          Length = 652

 Score =  841 bits (2173), Expect = 0.0
 Identities = 386/557 (69%), Positives = 453/557 (81%), Gaps = 1/557 (0%)
 Frame = +2

Query: 572  YIENNDVDFDDTIS-RKQKNYTVLSEEDIRHRQEEDITRICAVLSISRVSAAILLCNYNW 748
            +I+N+  D DD  S R Q+NYT+L+E DIR RQE+DITRI  VLSI RVSA+ILL +Y W
Sbjct: 103  FIDNDSDDSDDLTSHRYQQNYTILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYW 162

Query: 749  SVSNVHDAWFADEENVRKTVGLVEKPVVQYPKSKKVTCGICFDNYRHQEMSSAACGHLFC 928
            SVS VHD WFADEE VRK VGL+EKPVVQ+P ++++TCGICF+NY    +SSAACGH FC
Sbjct: 163  SVSKVHDEWFADEEKVRKAVGLLEKPVVQFPNARELTCGICFENYPRDRISSAACGHPFC 222

Query: 929  TTCWKGYISTSINDGPGCLILRCPDPSCGVAVGQNMISILDSDEHKDKYSRYLLRSYVEA 1108
             TCW GY ST+I DGPGCL+LRCPDP+CG AVGQ+MI++L SDE K+KYSRY LRSY+E 
Sbjct: 223  GTCWAGYTSTAITDGPGCLMLRCPDPTCGAAVGQDMINLLASDEDKEKYSRYFLRSYIED 282

Query: 1109 NRKTKWCPAPGCEYAVDFIVGSGTYDVLCNCTYTFCWNCLEEGHRPVDCDTVSKWILKNS 1288
            NRKTKWCPAPGC+YAVDFIVGSG+YDV C C+Y+FCWNC EE HRPVDC TV+KWILKNS
Sbjct: 283  NRKTKWCPAPGCDYAVDFIVGSGSYDVSCRCSYSFCWNCTEEAHRPVDCGTVAKWILKNS 342

Query: 1289 AESENVNWILANSKPCPKCKRPIEKNHGCMHMTCTPPCKFQFCWLCLGSWTDHGNRTGGY 1468
            AESEN+NWILANSKPCPKCKRPIEKN GCMH+TCTPPCKF+FCWLCLG+W+DHG RTGG+
Sbjct: 343  AESENMNWILANSKPCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGF 402

Query: 1469 YSCNRYAAAKKDGEYEESEKRREMAKKSLERYTHYYERWATNHSSRLKAVGNLQEMQTVH 1648
            Y+CNRY  AK++G Y+E+EKRR+MAK SLERYTHYYERWATN SSR KA+ +LQ+MQTV+
Sbjct: 403  YACNRYETAKQEGVYDEAEKRRDMAKNSLERYTHYYERWATNQSSRQKALADLQQMQTVN 462

Query: 1649 IEKLIDEQCQLKSQLKFITDAWLQIIECRRVLKWTYAYGYYLPEQEDVKRNFFEYLQGQA 1828
            IEKL D+QCQ +SQLKFIT+AWLQI+ECRRVLKWTYAYGYYLPE E  KR FFEYLQG+A
Sbjct: 463  IEKLSDKQCQPESQLKFITEAWLQIVECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGEA 522

Query: 1829 ESGLERLHKCAEKDLAVYLDQEGPSNDFNEFRTKLTGLTTVTRNYFENLVRALENGLADV 2008
            ESGLERLH+CAEK+L  YLD +GPS DFNEFRTKL GLT+VTRNYFENLVRALENGL+DV
Sbjct: 523  ESGLERLHQCAEKELQTYLDADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDV 582

Query: 2009 DSHSACXXXXXXXXXXXXXXXXXXXXXXXXXXXNGDGQSQENHNQDNHSQENQGSWTCEH 2188
            DS  AC                            G G S  + +  + + ++ G W+CEH
Sbjct: 583  DSRGAC--------SRTASSKSLGGGSSKARGGRGKGTSSRS-SSSSRNLDDSGHWSCEH 633

Query: 2189 CTYLNDQPATICLMCNR 2239
            CT+ N + ATIC +C +
Sbjct: 634  CTFANVRSATICQICQQ 650


>emb|CBI38350.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  841 bits (2173), Expect = 0.0
 Identities = 386/557 (69%), Positives = 453/557 (81%), Gaps = 1/557 (0%)
 Frame = +2

Query: 572  YIENNDVDFDDTIS-RKQKNYTVLSEEDIRHRQEEDITRICAVLSISRVSAAILLCNYNW 748
            +I+N+  D DD  S R Q+NYT+L+E DIR RQE+DITRI  VLSI RVSA+ILL +Y W
Sbjct: 32   FIDNDSDDSDDLTSHRYQQNYTILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYW 91

Query: 749  SVSNVHDAWFADEENVRKTVGLVEKPVVQYPKSKKVTCGICFDNYRHQEMSSAACGHLFC 928
            SVS VHD WFADEE VRK VGL+EKPVVQ+P ++++TCGICF+NY    +SSAACGH FC
Sbjct: 92   SVSKVHDEWFADEEKVRKAVGLLEKPVVQFPNARELTCGICFENYPRDRISSAACGHPFC 151

Query: 929  TTCWKGYISTSINDGPGCLILRCPDPSCGVAVGQNMISILDSDEHKDKYSRYLLRSYVEA 1108
             TCW GY ST+I DGPGCL+LRCPDP+CG AVGQ+MI++L SDE K+KYSRY LRSY+E 
Sbjct: 152  GTCWAGYTSTAITDGPGCLMLRCPDPTCGAAVGQDMINLLASDEDKEKYSRYFLRSYIED 211

Query: 1109 NRKTKWCPAPGCEYAVDFIVGSGTYDVLCNCTYTFCWNCLEEGHRPVDCDTVSKWILKNS 1288
            NRKTKWCPAPGC+YAVDFIVGSG+YDV C C+Y+FCWNC EE HRPVDC TV+KWILKNS
Sbjct: 212  NRKTKWCPAPGCDYAVDFIVGSGSYDVSCRCSYSFCWNCTEEAHRPVDCGTVAKWILKNS 271

Query: 1289 AESENVNWILANSKPCPKCKRPIEKNHGCMHMTCTPPCKFQFCWLCLGSWTDHGNRTGGY 1468
            AESEN+NWILANSKPCPKCKRPIEKN GCMH+TCTPPCKF+FCWLCLG+W+DHG RTGG+
Sbjct: 272  AESENMNWILANSKPCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGF 331

Query: 1469 YSCNRYAAAKKDGEYEESEKRREMAKKSLERYTHYYERWATNHSSRLKAVGNLQEMQTVH 1648
            Y+CNRY  AK++G Y+E+EKRR+MAK SLERYTHYYERWATN SSR KA+ +LQ+MQTV+
Sbjct: 332  YACNRYETAKQEGVYDEAEKRRDMAKNSLERYTHYYERWATNQSSRQKALADLQQMQTVN 391

Query: 1649 IEKLIDEQCQLKSQLKFITDAWLQIIECRRVLKWTYAYGYYLPEQEDVKRNFFEYLQGQA 1828
            IEKL D+QCQ +SQLKFIT+AWLQI+ECRRVLKWTYAYGYYLPE E  KR FFEYLQG+A
Sbjct: 392  IEKLSDKQCQPESQLKFITEAWLQIVECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGEA 451

Query: 1829 ESGLERLHKCAEKDLAVYLDQEGPSNDFNEFRTKLTGLTTVTRNYFENLVRALENGLADV 2008
            ESGLERLH+CAEK+L  YLD +GPS DFNEFRTKL GLT+VTRNYFENLVRALENGL+DV
Sbjct: 452  ESGLERLHQCAEKELQTYLDADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDV 511

Query: 2009 DSHSACXXXXXXXXXXXXXXXXXXXXXXXXXXXNGDGQSQENHNQDNHSQENQGSWTCEH 2188
            DS  AC                            G G S  + +  + + ++ G W+CEH
Sbjct: 512  DSRGAC--------SRTASSKSLGGGSSKARGGRGKGTSSRS-SSSSRNLDDSGHWSCEH 562

Query: 2189 CTYLNDQPATICLMCNR 2239
            CT+ N + ATIC +C +
Sbjct: 563  CTFANVRSATICQICQQ 579


>emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera]
          Length = 588

 Score =  831 bits (2146), Expect = 0.0
 Identities = 378/539 (70%), Positives = 442/539 (82%)
 Frame = +2

Query: 623  KNYTVLSEEDIRHRQEEDITRICAVLSISRVSAAILLCNYNWSVSNVHDAWFADEENVRK 802
            +NYT+L+E DIR RQE+DITRI  VLSI RVSA+ILL +Y WSVS VHD WFADEE VRK
Sbjct: 57   QNYTILTEADIRQRQEDDITRISTVLSIPRVSASILLRHYYWSVSKVHDEWFADEEKVRK 116

Query: 803  TVGLVEKPVVQYPKSKKVTCGICFDNYRHQEMSSAACGHLFCTTCWKGYISTSINDGPGC 982
             VGL+EKPVVQ+P ++++TCGICF+NY    +SSAACGH FC TCW GY ST+I DGPGC
Sbjct: 117  AVGLLEKPVVQFPNARELTCGICFENYPRDRISSAACGHPFCGTCWAGYTSTAITDGPGC 176

Query: 983  LILRCPDPSCGVAVGQNMISILDSDEHKDKYSRYLLRSYVEANRKTKWCPAPGCEYAVDF 1162
            L+LRCPDP+CG AVGQ+MI++L SDE K+KYSRY LRSY+E NRKTKWCPAPGC+YAVDF
Sbjct: 177  LMLRCPDPTCGAAVGQDMINLLASDEDKEKYSRYFLRSYIEDNRKTKWCPAPGCDYAVDF 236

Query: 1163 IVGSGTYDVLCNCTYTFCWNCLEEGHRPVDCDTVSKWILKNSAESENVNWILANSKPCPK 1342
            IVGSG+YDV C C+Y+FCWNC EE HRPVDC TV+KWILKNSAESEN+NWILANSKPCPK
Sbjct: 237  IVGSGSYDVSCRCSYSFCWNCTEEAHRPVDCGTVAKWILKNSAESENMNWILANSKPCPK 296

Query: 1343 CKRPIEKNHGCMHMTCTPPCKFQFCWLCLGSWTDHGNRTGGYYSCNRYAAAKKDGEYEES 1522
            CKRPIEKN GCMH+TCTPPCKF+FCWLCLG+W+DHG RTGG+Y+CNRY  AK++G Y+E+
Sbjct: 297  CKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGVYDEA 356

Query: 1523 EKRREMAKKSLERYTHYYERWATNHSSRLKAVGNLQEMQTVHIEKLIDEQCQLKSQLKFI 1702
            EKRR+MAK SLERYTHYYERWATN SSR KA+ +LQ+MQTV+IEKL D+QCQ +SQLKFI
Sbjct: 357  EKRRDMAKNSLERYTHYYERWATNQSSRQKALADLQQMQTVNIEKLSDKQCQPESQLKFI 416

Query: 1703 TDAWLQIIECRRVLKWTYAYGYYLPEQEDVKRNFFEYLQGQAESGLERLHKCAEKDLAVY 1882
            T+AWLQI+ECRRVLKWTYAYGYYLPE E  KR FFEYLQG+AESGLERLH+CAEK+L  Y
Sbjct: 417  TEAWLQIVECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGEAESGLERLHQCAEKELQTY 476

Query: 1883 LDQEGPSNDFNEFRTKLTGLTTVTRNYFENLVRALENGLADVDSHSACXXXXXXXXXXXX 2062
            LD +GPS DFNEFRTKL GLT+VTRNYFENLVRALENGL+DVDS  AC            
Sbjct: 477  LDADGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSRGAC--------SRTA 528

Query: 2063 XXXXXXXXXXXXXXXNGDGQSQENHNQDNHSQENQGSWTCEHCTYLNDQPATICLMCNR 2239
                            G G S  + +  + + ++ G W+CEHCT+ N + ATIC +C +
Sbjct: 529  SSKSLGGGSSKARGGRGKGTSSRS-SSSSRNLDDSGHWSCEHCTFANVRSATICQICQQ 586


>ref|XP_002315117.1| predicted protein [Populus trichocarpa] gi|222864157|gb|EEF01288.1|
            predicted protein [Populus trichocarpa]
          Length = 591

 Score =  828 bits (2139), Expect = 0.0
 Identities = 379/557 (68%), Positives = 447/557 (80%), Gaps = 1/557 (0%)
 Frame = +2

Query: 572  YIENNDVDFDDTIS-RKQKNYTVLSEEDIRHRQEEDITRICAVLSISRVSAAILLCNYNW 748
            +I+N+  D DD IS R Q+NYTVLSEEDIR RQ++D+ RI  VLSIS+V+A+ILL  YNW
Sbjct: 42   FIDNDSDDSDDLISHRHQQNYTVLSEEDIRQRQDDDVMRIATVLSISKVAASILLRYYNW 101

Query: 749  SVSNVHDAWFADEENVRKTVGLVEKPVVQYPKSKKVTCGICFDNYRHQEMSSAACGHLFC 928
            SVS VHD WFADEE VRK VGL+E+PVV +P  +++TCGICF+ Y    + +AACGH FC
Sbjct: 102  SVSKVHDEWFADEEKVRKAVGLLEEPVVPFPDGREMTCGICFETYPSDRLLAAACGHPFC 161

Query: 929  TTCWKGYISTSINDGPGCLILRCPDPSCGVAVGQNMISILDSDEHKDKYSRYLLRSYVEA 1108
             +CW GYIST+INDGPGCL+LRCPDPSC  A+GQ+MI++L SDE  +K+SRY +RSY+E 
Sbjct: 162  NSCWAGYISTAINDGPGCLMLRCPDPSCNAAIGQDMINLLTSDEDSEKHSRYFIRSYIED 221

Query: 1109 NRKTKWCPAPGCEYAVDFIVGSGTYDVLCNCTYTFCWNCLEEGHRPVDCDTVSKWILKNS 1288
            NRKTKWCPAPGC+YAVDFIVGSG+YDV C C Y+FCWNC EE HRPVDC TV+KWILKNS
Sbjct: 222  NRKTKWCPAPGCDYAVDFIVGSGSYDVTCRCAYSFCWNCTEEAHRPVDCGTVAKWILKNS 281

Query: 1289 AESENVNWILANSKPCPKCKRPIEKNHGCMHMTCTPPCKFQFCWLCLGSWTDHGNRTGGY 1468
            AESEN+NWILANSKPCPKCKRPIEKN GCMH+TCTPPCKF+FC LCLG+W+DHG RTGG+
Sbjct: 282  AESENMNWILANSKPCPKCKRPIEKNQGCMHITCTPPCKFEFCRLCLGAWSDHGERTGGF 341

Query: 1469 YSCNRYAAAKKDGEYEESEKRREMAKKSLERYTHYYERWATNHSSRLKAVGNLQEMQTVH 1648
            Y+CNRY  AK++G Y+ESEKRREMAK SLERYTHYYERWATN SSR KA+ +LQ+MQ VH
Sbjct: 342  YACNRYETAKQEGVYDESEKRREMAKNSLERYTHYYERWATNQSSRQKALADLQQMQNVH 401

Query: 1649 IEKLIDEQCQLKSQLKFITDAWLQIIECRRVLKWTYAYGYYLPEQEDVKRNFFEYLQGQA 1828
            +EKL D QCQ +SQLKFI +AWLQI+ECRRVLKWTYAYGYYLPE E  KR FFEY+QG+A
Sbjct: 402  LEKLSDIQCQPESQLKFIIEAWLQIVECRRVLKWTYAYGYYLPEHEHAKRMFFEYVQGEA 461

Query: 1829 ESGLERLHKCAEKDLAVYLDQEGPSNDFNEFRTKLTGLTTVTRNYFENLVRALENGLADV 2008
            ESGLERLH+CAEK+L +YL+ EGPS DFNEFRTKL GLT+VTRNYFENLVRALENGL+DV
Sbjct: 462  ESGLERLHQCAEKELQIYLNAEGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDV 521

Query: 2009 DSHSACXXXXXXXXXXXXXXXXXXXXXXXXXXXNGDGQSQENHNQDNHSQENQGSWTCEH 2188
            DSH  C                            G G S    +  + + ++ G W+CEH
Sbjct: 522  DSHGTC--------SRTASSKSLGGGSSRARAGRGKG-STSRSSGPSRNIDDPGHWSCEH 572

Query: 2189 CTYLNDQPATICLMCNR 2239
            CT+ N +PATIC MC +
Sbjct: 573  CTFANIKPATICAMCQQ 589


>ref|XP_002312201.1| predicted protein [Populus trichocarpa] gi|222852021|gb|EEE89568.1|
            predicted protein [Populus trichocarpa]
          Length = 591

 Score =  828 bits (2138), Expect = 0.0
 Identities = 376/557 (67%), Positives = 444/557 (79%), Gaps = 1/557 (0%)
 Frame = +2

Query: 572  YIENNDVDFDDTIS-RKQKNYTVLSEEDIRHRQEEDITRICAVLSISRVSAAILLCNYNW 748
            +I+N+  D DD IS R Q+NYT+LSE DIR RQ++DI RI  VLSIS+V+A ILL  YNW
Sbjct: 42   FIDNDSDDSDDLISHRYQQNYTILSEGDIRQRQDDDIMRIATVLSISKVAATILLRYYNW 101

Query: 749  SVSNVHDAWFADEENVRKTVGLVEKPVVQYPKSKKVTCGICFDNYRHQEMSSAACGHLFC 928
            SVS VHD WFADEE VR+ VGL+E+PVV +P  +++TCGICF+ Y    + +  CGH FC
Sbjct: 102  SVSKVHDEWFADEEKVRRAVGLLEEPVVPFPDGREMTCGICFETYPSDRLRAVVCGHAFC 161

Query: 929  TTCWKGYISTSINDGPGCLILRCPDPSCGVAVGQNMISILDSDEHKDKYSRYLLRSYVEA 1108
             +CW GYIST+INDGPGCL+LRCPDPSC  AVGQ+MI++L S+E  DKYSRY +RSY+E 
Sbjct: 162  NSCWAGYISTAINDGPGCLMLRCPDPSCNAAVGQDMINVLTSNEDSDKYSRYFIRSYIED 221

Query: 1109 NRKTKWCPAPGCEYAVDFIVGSGTYDVLCNCTYTFCWNCLEEGHRPVDCDTVSKWILKNS 1288
            NRKTKWCPAPGC+YAVDFIVGSG+YDV+C C Y+FCWNC EE HRPVDC TV+KWILKNS
Sbjct: 222  NRKTKWCPAPGCDYAVDFIVGSGSYDVICRCAYSFCWNCTEEAHRPVDCGTVAKWILKNS 281

Query: 1289 AESENVNWILANSKPCPKCKRPIEKNHGCMHMTCTPPCKFQFCWLCLGSWTDHGNRTGGY 1468
            AESEN+NWILANSKPCPKCKRPIEKN GCMH+TCTPPCKF+FCWLCLG+W+DHG RTGG+
Sbjct: 282  AESENMNWILANSKPCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGF 341

Query: 1469 YSCNRYAAAKKDGEYEESEKRREMAKKSLERYTHYYERWATNHSSRLKAVGNLQEMQTVH 1648
            Y+CNRY  AK++G Y+++EKRREMAK SLERYTHYYERWATN +SR KA+ +LQ+MQ VH
Sbjct: 342  YACNRYETAKQEGVYDDTEKRREMAKNSLERYTHYYERWATNQTSRQKALADLQQMQNVH 401

Query: 1649 IEKLIDEQCQLKSQLKFITDAWLQIIECRRVLKWTYAYGYYLPEQEDVKRNFFEYLQGQA 1828
            +EKL D QCQ +SQLKFI +AWLQI+ECRRVLKWTYAYGYYLPE E  KR FFEYLQG+A
Sbjct: 402  LEKLSDIQCQPESQLKFIIEAWLQIVECRRVLKWTYAYGYYLPEHEHAKRLFFEYLQGEA 461

Query: 1829 ESGLERLHKCAEKDLAVYLDQEGPSNDFNEFRTKLTGLTTVTRNYFENLVRALENGLADV 2008
            ESGLERLH+CAEK+L +YL+ EGPS DFNEFRTKL GLT+VTRNYFENLVRALENGL+DV
Sbjct: 462  ESGLERLHQCAEKELQIYLNAEGPSKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDV 521

Query: 2009 DSHSACXXXXXXXXXXXXXXXXXXXXXXXXXXXNGDGQSQENHNQDNHSQENQGSWTCEH 2188
            DSH AC                            G G +  +     +  E  G W+CE+
Sbjct: 522  DSHGAC--------SRMASSKSLGGGSSRARAGRGKGSTSRSSGPSRNIDE-PGHWSCEY 572

Query: 2189 CTYLNDQPATICLMCNR 2239
            CT+ N +PATIC MC +
Sbjct: 573  CTFANIKPATICAMCQQ 589


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