BLASTX nr result

ID: Coptis24_contig00007239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007239
         (1928 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28236.3| unnamed protein product [Vitis vinifera]              952   0.0  
ref|XP_002285365.1| PREDICTED: GTPase-activating protein gyp7-li...   900   0.0  
ref|XP_003609386.1| TBC1 domain family member [Medicago truncatu...   813   0.0  
ref|XP_004139297.1| PREDICTED: TBC1 domain family member 15-like...   807   0.0  
ref|XP_002527173.1| conserved hypothetical protein [Ricinus comm...   800   0.0  

>emb|CBI28236.3| unnamed protein product [Vitis vinifera]
          Length = 684

 Score =  952 bits (2461), Expect = 0.0
 Identities = 462/589 (78%), Positives = 511/589 (86%), Gaps = 4/589 (0%)
 Frame = -2

Query: 1900 VTEKDRNLYTIRAVPVTDIRSIRRHTPTFGWQYLIIVLSSGLAFPPLYFYNGGVREFLAT 1721
            ++EKD++LYTIRAVP TD+RSIRRHTPT GWQY+I+VLSSGLAFPPLYFYNGGVREFLAT
Sbjct: 93   LSEKDKSLYTIRAVPFTDVRSIRRHTPTLGWQYVIVVLSSGLAFPPLYFYNGGVREFLAT 152

Query: 1720 LKQHVFLVRSADDVNVFLVNDFQDPLQKSLSSLELPGAVSIANSSSTPTFANSVPPNENF 1541
            +KQH FLVRSADD NVFLVNDFQDPLQ++LSSLELP AVS+AN  ST    +  P NEN 
Sbjct: 153  IKQHAFLVRSADDANVFLVNDFQDPLQRTLSSLELPMAVSVANGPSTSVSVSEPPSNENQ 212

Query: 1540 EGADVGT----SSTSQYGGRHGLKVNDPARDLSIQVLEKFSLVTKFARLTTSNILREIQN 1373
            E AD G      +TSQY GRH  K++DPARDLSIQVLEKFSLVTKFAR TTS + RE   
Sbjct: 213  EKADGGNFDGLGATSQYNGRHRPKIHDPARDLSIQVLEKFSLVTKFARDTTSQLFRESHG 272

Query: 1372 DGFLANDRKKPSQSLPVNNHETGLDEVQSVPDTISVTPDPLEKALCRKENQGEEAATRVG 1193
            DGF +NDR+  +QSL  + H+   DE Q VPD I V  DPLEK  CRK+   EEA T VG
Sbjct: 273  DGFGSNDRRHHNQSLLDSPHKASSDE-QKVPDEIPVPSDPLEKTRCRKQYHDEEAVTNVG 331

Query: 1192 TFELVDCKEFDKITLVWGQPRQPPLGSEEWATFLDAEGRVTDSKALRKRIFYGGLEQQIR 1013
            TFEL+DCKEFDK+ LVWG+PRQPPLGSEEWATFLD+EGR+ DSKALRKRIFYGG+E  +R
Sbjct: 332  TFELIDCKEFDKLALVWGKPRQPPLGSEEWATFLDSEGRIMDSKALRKRIFYGGIEHSLR 391

Query: 1012 NEVWKFLLGYHEYDSTGAEREYLASVKKVEYETLKYQWQSVSPAQSRRFTKFRERKGLID 833
             EVW FLLGYH YDST AEREYL S+KK EYET+K QWQS+SP Q++RFTKFRERKGLI+
Sbjct: 392  KEVWTFLLGYHAYDSTSAEREYLVSIKKSEYETVKQQWQSISPEQAKRFTKFRERKGLIE 451

Query: 832  KDVVRTDRSSSFYDGDDNPNVILLRDILLTYSFYNFDLGYCQGMSDLLSPILYVMKDESE 653
            KDVVRTDRS SFYDGDDNPNV LLRDILLTYSFYNFDLGYCQGMSDLLSPIL+VMKDE+E
Sbjct: 452  KDVVRTDRSLSFYDGDDNPNVYLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMKDEAE 511

Query: 652  SFWCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDSPLHNYFRQNDCLNYFFCFRWV 473
            SFWCFVALMERLGPNFNRDQNGMH+QLFA+SKLVELLDSPLHNYF+QNDCLNYFFCFRWV
Sbjct: 512  SFWCFVALMERLGPNFNRDQNGMHTQLFAISKLVELLDSPLHNYFKQNDCLNYFFCFRWV 571

Query: 472  LIQFKREFDFEKMMRLWEVLWTHYQSEHFHLYVCVAILKKHGKKIMGEEMDFDTLLKFIN 293
            LIQFKREF++EK M+LWEVLWTHY SEH HLYVCVAILK++  KIMGE+MDFDTLLKFIN
Sbjct: 572  LIQFKREFEYEKTMKLWEVLWTHYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTLLKFIN 631

Query: 292  ELSGQIDLDATLRDAEALCICAGENGEACIPPGTPPSLPVEADLLYPLQ 146
            ELSGQIDLDATLRDAEALCICAGENG A IPPGTPPSLP+++ LL P Q
Sbjct: 632  ELSGQIDLDATLRDAEALCICAGENGAANIPPGTPPSLPIDSGLLCPQQ 680


>ref|XP_002285365.1| PREDICTED: GTPase-activating protein gyp7-like [Vitis vinifera]
          Length = 657

 Score =  900 bits (2325), Expect = 0.0
 Identities = 444/589 (75%), Positives = 491/589 (83%), Gaps = 4/589 (0%)
 Frame = -2

Query: 1900 VTEKDRNLYTIRAVPVTDIRSIRRHTPTFGWQYLIIVLSSGLAFPPLYFYNGGVREFLAT 1721
            ++EKD++LYTIRAVP TD+RSIRRHTPT GWQY+I+VLSSGLAFPPLYFYNGGVREFLAT
Sbjct: 93   LSEKDKSLYTIRAVPFTDVRSIRRHTPTLGWQYVIVVLSSGLAFPPLYFYNGGVREFLAT 152

Query: 1720 LKQHVFLVRSADDVNVFLVNDFQDPLQKSLSSLELPGAVSIANSSSTPTFANSVPPNENF 1541
            +KQH FLVRSADD NVFLVNDFQDPLQ++LSSLELP AVS+AN  ST    +  P NEN 
Sbjct: 153  IKQHAFLVRSADDANVFLVNDFQDPLQRTLSSLELPMAVSVANGPSTSVSVSEPPSNENQ 212

Query: 1540 EGADVGT----SSTSQYGGRHGLKVNDPARDLSIQVLEKFSLVTKFARLTTSNILREIQN 1373
            E AD G      +TSQY GRH  K++DPARDLSIQVLEKFSLVTKFAR TTS + RE   
Sbjct: 213  EKADGGNFDGLGATSQYNGRHRPKIHDPARDLSIQVLEKFSLVTKFARDTTSQLFRESHG 272

Query: 1372 DGFLANDRKKPSQSLPVNNHETGLDEVQSVPDTISVTPDPLEKALCRKENQGEEAATRVG 1193
            DGF +NDR+  +QSL  + H+   DE Q VPD I V  DPL                   
Sbjct: 273  DGFGSNDRRHHNQSLLDSPHKASSDE-QKVPDEIPVPSDPL------------------- 312

Query: 1192 TFELVDCKEFDKITLVWGQPRQPPLGSEEWATFLDAEGRVTDSKALRKRIFYGGLEQQIR 1013
                    EFDK+ LVWG+PRQPPLGSEEWATFLD+EGR+ DSKALRKRIFYGG+E  +R
Sbjct: 313  --------EFDKLALVWGKPRQPPLGSEEWATFLDSEGRIMDSKALRKRIFYGGIEHSLR 364

Query: 1012 NEVWKFLLGYHEYDSTGAEREYLASVKKVEYETLKYQWQSVSPAQSRRFTKFRERKGLID 833
             EVW FLLGYH YDST AEREYL S+KK EYET+K QWQS+SP Q++RFTKFRERKGLI+
Sbjct: 365  KEVWTFLLGYHAYDSTSAEREYLVSIKKSEYETVKQQWQSISPEQAKRFTKFRERKGLIE 424

Query: 832  KDVVRTDRSSSFYDGDDNPNVILLRDILLTYSFYNFDLGYCQGMSDLLSPILYVMKDESE 653
            KDVVRTDRS SFYDGDDNPNV LLRDILLTYSFYNFDLGYCQGMSDLLSPIL+VMKDE+E
Sbjct: 425  KDVVRTDRSLSFYDGDDNPNVYLLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMKDEAE 484

Query: 652  SFWCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDSPLHNYFRQNDCLNYFFCFRWV 473
            SFWCFVALMERLGPNFNRDQNGMH+QLFA+SKLVELLDSPLHNYF+QNDCLNYFFCFRWV
Sbjct: 485  SFWCFVALMERLGPNFNRDQNGMHTQLFAISKLVELLDSPLHNYFKQNDCLNYFFCFRWV 544

Query: 472  LIQFKREFDFEKMMRLWEVLWTHYQSEHFHLYVCVAILKKHGKKIMGEEMDFDTLLKFIN 293
            LIQFKREF++EK M+LWEVLWTHY SEH HLYVCVAILK++  KIMGE+MDFDTLLKFIN
Sbjct: 545  LIQFKREFEYEKTMKLWEVLWTHYLSEHLHLYVCVAILKRYRNKIMGEQMDFDTLLKFIN 604

Query: 292  ELSGQIDLDATLRDAEALCICAGENGEACIPPGTPPSLPVEADLLYPLQ 146
            ELSGQIDLDATLRDAEALCICAGENG A IPPGTPPSLP+++ LL P Q
Sbjct: 605  ELSGQIDLDATLRDAEALCICAGENGAANIPPGTPPSLPIDSGLLCPQQ 653


>ref|XP_003609386.1| TBC1 domain family member [Medicago truncatula]
            gi|355510441|gb|AES91583.1| TBC1 domain family member
            [Medicago truncatula]
          Length = 666

 Score =  813 bits (2101), Expect = 0.0
 Identities = 411/586 (70%), Positives = 471/586 (80%), Gaps = 4/586 (0%)
 Frame = -2

Query: 1900 VTEKDRNLYTIRAVPVTDIRSIRRHTPTFGWQYLIIVLSSGLAFPPLYFYNGGVREFLAT 1721
            +++KDRNLYTIRAVP TD+RSIRRHTP  GWQY+I+VLSSGLA+PPLYFY+GGV+EFLAT
Sbjct: 93   LSDKDRNLYTIRAVPFTDVRSIRRHTPALGWQYIIVVLSSGLAYPPLYFYSGGVKEFLAT 152

Query: 1720 LKQHVFLVRSADDVNVFLVNDFQDPLQKSLSSLELPGAVSIANSSSTPTFANSVPPNENF 1541
            +KQHV LVRSA+D NVFLVNDFQ  LQK+LSSLELP AV +A   S  + A+    NEN 
Sbjct: 153  IKQHVLLVRSAEDANVFLVNDFQSTLQKTLSSLELPRAVPLARGPSDMS-ADESTLNENQ 211

Query: 1540 E----GADVGTSSTSQYGGRHGLKVNDPARDLSIQVLEKFSLVTKFARLTTSNILREIQN 1373
            E    G + G+ S  Q+  R   KVNDP RDLSIQVLEKFSLVTKFAR TTS + RE Q 
Sbjct: 212  ERNDSGVNNGSVSVPQFHRRPRHKVNDPTRDLSIQVLEKFSLVTKFARETTSQLFRENQT 271

Query: 1372 DGFLANDRKKPSQSLPVNNHETGLDEVQSVPDTISVTPDPLEKALCRKENQGEEAATRVG 1193
            +GF AN+R+           ET LD     P +     DP + +    +   E +A    
Sbjct: 272  NGFRANERR--------TRIETNLDP----PKSSQTNLDPPKSSTVAGKVSDENSA---- 315

Query: 1192 TFELVDCKEFDKITLVWGQPRQPPLGSEEWATFLDAEGRVTDSKALRKRIFYGGLEQQIR 1013
                 D KEFD ++LVWG+PRQ PLGS+EW TF+D+EGRV DS+ALRKRIFYGGL+ ++R
Sbjct: 316  ---FSDSKEFDNLSLVWGKPRQSPLGSKEWITFVDSEGRVIDSEALRKRIFYGGLDHELR 372

Query: 1012 NEVWKFLLGYHEYDSTGAEREYLASVKKVEYETLKYQWQSVSPAQSRRFTKFRERKGLID 833
            NEVW  LLGY+ YDST AERE+L SVKK EYET+K QWQS+S AQ++RFTKFRERKGLI+
Sbjct: 373  NEVWGLLLGYYPYDSTYAEREFLKSVKKSEYETIKNQWQSISSAQAKRFTKFRERKGLIE 432

Query: 832  KDVVRTDRSSSFYDGDDNPNVILLRDILLTYSFYNFDLGYCQGMSDLLSPILYVMKDESE 653
            KDVVRTDRS +FY+GDDNPNV +LRDILLTYSFYNFDLGYCQGMSDLLSPIL+VM+DESE
Sbjct: 433  KDVVRTDRSLTFYEGDDNPNVNVLRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDESE 492

Query: 652  SFWCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDSPLHNYFRQNDCLNYFFCFRWV 473
            +FWCFV+LMERLGPNFNRDQNGMHSQLFALSKLVELLDSPLHNYF+Q DCLNYFFCFRW+
Sbjct: 493  AFWCFVSLMERLGPNFNRDQNGMHSQLFALSKLVELLDSPLHNYFKQRDCLNYFFCFRWI 552

Query: 472  LIQFKREFDFEKMMRLWEVLWTHYQSEHFHLYVCVAILKKHGKKIMGEEMDFDTLLKFIN 293
            LIQFKREF++EK MRLWEVLWTHY SEH HLYVCVA+LK+   KI+GEEMDFD+LLKFIN
Sbjct: 553  LIQFKREFEYEKTMRLWEVLWTHYPSEHLHLYVCVAVLKRCRGKIIGEEMDFDSLLKFIN 612

Query: 292  ELSGQIDLDATLRDAEALCICAGENGEACIPPGTPPSLPVEADLLY 155
            ELSG IDLDATLRDAEAL ICAGE G A IPPGTPPSLPV+    Y
Sbjct: 613  ELSGHIDLDATLRDAEALSICAGEEGAARIPPGTPPSLPVDDGSFY 658


>ref|XP_004139297.1| PREDICTED: TBC1 domain family member 15-like [Cucumis sativus]
          Length = 655

 Score =  807 bits (2084), Expect = 0.0
 Identities = 399/589 (67%), Positives = 467/589 (79%), Gaps = 2/589 (0%)
 Frame = -2

Query: 1915 DSVGAVTEKDRNLYTIRAVPVTDIRSIRRHTPTFGWQYLIIVLSSGLAFPPLYFYNGGVR 1736
            +S   ++E+DRNLYTIR VP T++RSIRRHTP FGWQY+IIVLSSGLAFP LYFYNGGVR
Sbjct: 88   NSNAKLSERDRNLYTIRGVPFTEVRSIRRHTPAFGWQYVIIVLSSGLAFPSLYFYNGGVR 147

Query: 1735 EFLATLKQHVFLVRSADDVNVFLVNDFQDPLQKSLSSLELPGAVSIANSSSTPTFANSVP 1556
            EFLAT+KQHVFLVRS +D N FLVNDFQ+PLQ++LSSLELP + SIA++ S+ +   S  
Sbjct: 148  EFLATVKQHVFLVRSEEDANTFLVNDFQNPLQRTLSSLELPRSGSIASAVSSASVDVSPS 207

Query: 1555 PNENFEGADVGT--SSTSQYGGRHGLKVNDPARDLSIQVLEKFSLVTKFARLTTSNILRE 1382
             +E   G D     S  S+YGG+   K  DPARDL IQ+LEKFSLVTKFAR TTS + RE
Sbjct: 208  NSERRAGEDSHDERSRISRYGGKQRHKAQDPARDLPIQILEKFSLVTKFARETTSQLFRE 267

Query: 1381 IQNDGFLANDRKKPSQSLPVNNHETGLDEVQSVPDTISVTPDPLEKALCRKENQGEEAAT 1202
              N+GF   + +  +QS  +++ +T  ++++ V D   V  DP++               
Sbjct: 268  NHNNGFSVAEMRIQNQS-SLDSPQTSSNDLEKVTDDSPVVQDPIQ--------------- 311

Query: 1201 RVGTFELVDCKEFDKITLVWGQPRQPPLGSEEWATFLDAEGRVTDSKALRKRIFYGGLEQ 1022
                        FDK+TLVWG+PRQPPLGSEEWATFLDAEGRV DS +LRKRIFYGG+E 
Sbjct: 312  ------------FDKLTLVWGKPRQPPLGSEEWATFLDAEGRVLDSTSLRKRIFYGGVEH 359

Query: 1021 QIRNEVWKFLLGYHEYDSTGAEREYLASVKKVEYETLKYQWQSVSPAQSRRFTKFRERKG 842
             +R EVW FLLG+H Y+ST AEREYL S+K+ EY T+K QWQS+SP Q++RFTKF+ERKG
Sbjct: 360  NLRKEVWAFLLGFHAYNSTYAEREYLQSIKRSEYLTIKNQWQSISPEQAKRFTKFKERKG 419

Query: 841  LIDKDVVRTDRSSSFYDGDDNPNVILLRDILLTYSFYNFDLGYCQGMSDLLSPILYVMKD 662
            LI+KDVVRTDRS SF+DGD+NPNV LL DILLTYSFYNFDLGYCQGMSD LSPIL+VM D
Sbjct: 420  LIEKDVVRTDRSLSFFDGDENPNVKLLHDILLTYSFYNFDLGYCQGMSDFLSPILFVMGD 479

Query: 661  ESESFWCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDSPLHNYFRQNDCLNYFFCF 482
            ESESFWCFVALMERLGPNFNRDQ GMH QLFA+SKLVELLD+PLHNYF Q+DCLNYFFCF
Sbjct: 480  ESESFWCFVALMERLGPNFNRDQTGMHCQLFAISKLVELLDTPLHNYFSQHDCLNYFFCF 539

Query: 481  RWVLIQFKREFDFEKMMRLWEVLWTHYQSEHFHLYVCVAILKKHGKKIMGEEMDFDTLLK 302
            RWVLIQFKREF +EK+M LWEVLWTHY SEH HLY+CVA+LK++  KIMGE+MDFDTLLK
Sbjct: 540  RWVLIQFKREFAYEKVMHLWEVLWTHYPSEHLHLYICVAVLKRYRNKIMGEQMDFDTLLK 599

Query: 301  FINELSGQIDLDATLRDAEALCICAGENGEACIPPGTPPSLPVEADLLY 155
            FINELSG IDLDA +RDAEALC+CAGENG A IPPGTPPSLP++    Y
Sbjct: 600  FINELSGHIDLDAAIRDAEALCVCAGENGAANIPPGTPPSLPLDDGSYY 648


>ref|XP_002527173.1| conserved hypothetical protein [Ricinus communis]
            gi|223533438|gb|EEF35186.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 645

 Score =  800 bits (2065), Expect = 0.0
 Identities = 410/592 (69%), Positives = 462/592 (78%), Gaps = 7/592 (1%)
 Frame = -2

Query: 1900 VTEKDRNLYTIRAVPVTDIRSIRRHTPTFGWQYLIIVLSSGLAFPPLYFYNGGVREFLAT 1721
            ++E+D NLYTIRAVP TD+RSIRRHTPT GWQY+I+VLSSGLAFPPLYFYNGGV+EFLAT
Sbjct: 96   LSERDMNLYTIRAVPFTDVRSIRRHTPTLGWQYIIVVLSSGLAFPPLYFYNGGVKEFLAT 155

Query: 1720 LKQHVFLVRSADDVNVFLVNDFQDPLQKSLSSLELPGAVSIANSSSTPTFANSVPPNENF 1541
            +KQHVF+VR+                   LSSLELP AV +A+++S    A+  P  EN 
Sbjct: 156  MKQHVFIVRT-------------------LSSLELPRAVPMASAASACPSASESPSYENQ 196

Query: 1540 EGADV----GTSSTSQYGGRHGLKVNDPARDLSIQVLEKFSLVTKFARLTTSNILREIQN 1373
            E AD     G+SS  Q+ GR   K NDPARDLSIQVLEKFSLVTKFAR TTS +  E  +
Sbjct: 197  ERADGNIHRGSSSIPQHDGRQRHKGNDPARDLSIQVLEKFSLVTKFARETTSQLFWENHS 256

Query: 1372 DGFLANDRKKPSQS-LPVNNHETGLDEVQSVPDTISVTPDPLEKALCRKENQGEEAATRV 1196
            +GF A +RK  +QS L    H+T   + + V    +V  DPLE                 
Sbjct: 257  NGFDAIERKSYNQSSLDSCPHKTPPKDTEEVSIQSAVPSDPLE----------------- 299

Query: 1195 GTFELVDCKEFDKITLVWGQPRQPPLGSEEWATFLDAEGRVTDSKALRKRIFYGGLEQQI 1016
                      FDK+TLVWG+PRQPPLG EEWATFLD+EGRVTDSKALRKRIFYGG+   +
Sbjct: 300  ----------FDKLTLVWGKPRQPPLGFEEWATFLDSEGRVTDSKALRKRIFYGGVGHTL 349

Query: 1015 RNEVWKFLLGYHEYDSTGAEREYLASVKKVEYETLKYQWQSVSPAQSRRFTKFRERKGLI 836
            R EVW FLLGYH YDST AERE L   KK+EYET+K QWQS+SP Q++RFTKFRERKGLI
Sbjct: 350  RREVWAFLLGYHAYDSTSAERECLQYTKKLEYETVKKQWQSISPEQAKRFTKFRERKGLI 409

Query: 835  DKDVVRTDRSSSFYDGDDNPNVILLRDILLTYSFYNFDLGYCQGMSDLLSPILYVMKDES 656
            DKDVVRTDRS SFYDGDDNPNV +LRDILLTYSFYNFDLGYCQGMSDLLSPIL+VM+DES
Sbjct: 410  DKDVVRTDRSLSFYDGDDNPNVNILRDILLTYSFYNFDLGYCQGMSDLLSPILFVMEDES 469

Query: 655  ESFWCFVALMERLGPNFNRDQNGMHSQLFALSKLVELLDSPLHNYFRQNDCLNYFFCFRW 476
            +SFWCFVALMERLGPNFNRDQ+GMHSQLFALSKLVELLD PLHNYF+QNDCLNYFFCFRW
Sbjct: 470  KSFWCFVALMERLGPNFNRDQSGMHSQLFALSKLVELLDGPLHNYFKQNDCLNYFFCFRW 529

Query: 475  VLIQFKREFDFEKMMRLWEVLWTHYQSEHFHLYVCVAILKKHGKKIMGEEMDFDTLLKFI 296
            +LIQFKREF++EK MRLWEVLWTHY SEH HL+ CV+ILK++  KIMGE+MDFDTLLKFI
Sbjct: 530  ILIQFKREFEYEKTMRLWEVLWTHYLSEHLHLFACVSILKRYRNKIMGEQMDFDTLLKFI 589

Query: 295  NELSGQIDLDATLRDAEALCICAGENGEACIPPGTPPSLPVEAD--LLYPLQ 146
            NELSG IDLDA LRDAEALCICAGENG ACIPPGTPPSLP+E +  LLY  Q
Sbjct: 590  NELSGHIDLDAILRDAEALCICAGENGAACIPPGTPPSLPLENENGLLYAQQ 641


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