BLASTX nr result
ID: Coptis24_contig00007232
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00007232 (2507 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003636168.1| Heterogeneous nuclear ribonucleoprotein Q [M... 308 5e-81 ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232... 307 1e-80 ref|XP_002526479.1| RNA binding protein, putative [Ricinus commu... 306 2e-80 dbj|BAK02672.1| predicted protein [Hordeum vulgare subsp. vulgare] 300 2e-78 emb|CBI34075.3| unnamed protein product [Vitis vinifera] 299 2e-78 >ref|XP_003636168.1| Heterogeneous nuclear ribonucleoprotein Q [Medicago truncatula] gi|355502103|gb|AES83306.1| Heterogeneous nuclear ribonucleoprotein Q [Medicago truncatula] Length = 824 Score = 308 bits (789), Expect = 5e-81 Identities = 218/559 (38%), Positives = 290/559 (51%), Gaps = 42/559 (7%) Frame = -1 Query: 2165 QKEYEVFVGGLDRDADEEDLRKVFKNMGEIVEVRLVKNKFSQKNKGFAFVRFATVEQAKR 1986 +KE+EVFVGGLD+DA E+DLRKVF +G + EVRL+ N ++KNKGFAF+RF VEQAKR Sbjct: 212 RKEFEVFVGGLDKDATEDDLRKVFSEVGVVTEVRLMMNPQTKKNKGFAFLRFENVEQAKR 271 Query: 1985 AAAELNYTQVRGKVCEVTRNNDNETLHLGNVCTTWTKDTLVEKLQPYELENLEDVHVIED 1806 A AEL + GK C VT + D++TL+LGN+C TWTK+ L EKL+ Y + N+ED+ ++ED Sbjct: 272 AVAELKNPVINGKQCGVTPSQDSDTLYLGNICKTWTKEALKEKLKHYGVTNVEDITLVED 331 Query: 1805 PKDRKRNRGYAFLNFSTHMDAVAACNKLQKGSLYLGTTVRADVAFAKSAVEPDEQIMSQV 1626 D+ NRG+AFL FS+ DA+ A +LQK + G A V+FA S ++P ++IMSQV Sbjct: 332 SNDKGTNRGFAFLEFSSRSDAMDAFKRLQKRDVTFGVDKPAKVSFADSFIDPGDEIMSQV 391 Query: 1625 KSVFLDGLPASWDESQVQKQFQKYGEIEHVQLARNMPSAKRKDFGFVYFRTREAALTCID 1446 K+VF+D LP SWDE V+ +KYGE+E ++LARNMP+A+RKD+GFV F + +AA+ C D Sbjct: 392 KTVFIDALPPSWDEDYVRNLLKKYGEVEKIELARNMPAARRKDYGFVTFGSHDAAIRCAD 451 Query: 1445 AVNKDGIGD-VRKVFLRATLKRPLQRRVPSAVGGW-----RGYDTDDYNGWSTRPS---- 1296 ++ +G+ +K +RA L RPLQR VG RG WS+RP+ Sbjct: 452 SITGTELGEGDKKAKVRARLSRPLQRGRGKHVGRGDYRPSRGSAIMSRPSWSSRPAPRSF 511 Query: 1295 ------GIG------RSYSNRENREVESFGRGHSPDHRIPGYNRYSTRGAVLETATSPV- 1155 GIG RS S R+ R V S P P Y R A + S V Sbjct: 512 SSRGVRGIGSRAPPIRSISARDRRPVMSIPVRSRP--LPPPARSYDRRPADAAYSKSSVK 569 Query: 1154 -------DIYGGRSR----YSTRTSFETRYTPVEEYSSQFRRGSVRQAPTSATSHSRPRA 1008 D+ RSR Y +R + E R T Y RGS P +T+ + PR Sbjct: 570 RDYGRRDDLPPPRSRVAVDYGSRMTSERRPT----YRDYPPRGSDYSDPPRSTARAAPRR 625 Query: 1007 PYFEXXXXXXXXXRNYEDFPVTYSRSHVPSRGEXXXXXXXXXXXXYENNSVDTYDYPTPS 828 Y + + YE P SH PS E DY + S Sbjct: 626 GYVD-----DGYSQRYERPPPPPPPSH-PSYREGRPR-----------------DYDSLS 662 Query: 827 RLKRPYSAVDD--------DRIVSRPLTRRSRSGGVDRDMGSYPVRVFSSFEEYSRSTQD 672 KR Y+AVDD SR G + +Y RV S Y ++ Sbjct: 663 GSKRSYAAVDDVPPRYADTGARQSRARLEYDYGGSASQYGDAYGDRVGRSSLGYGSGSRS 722 Query: 671 VHHGYDSVGHERRYSSGRG 615 G DS G YSS +G Sbjct: 723 SISGQDSHG---VYSSRQG 738 >ref|XP_002270340.2| PREDICTED: uncharacterized protein LOC100232913 [Vitis vinifera] gi|297734640|emb|CBI16691.3| unnamed protein product [Vitis vinifera] Length = 812 Score = 307 bits (786), Expect = 1e-80 Identities = 215/559 (38%), Positives = 284/559 (50%), Gaps = 54/559 (9%) Frame = -1 Query: 2165 QKEYEVFVGGLDRDADEEDLRKVFKNMGEIVEVRLVKNKFSQKNKGFAFVRFATVEQAKR 1986 +KE+EVFVGGLD+DA E+DLRKVF +GE+ EVRL+ N ++KNKGFAF+RFATVEQAKR Sbjct: 229 RKEFEVFVGGLDKDATEDDLRKVFSQVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKR 288 Query: 1985 AAAELNYTQVRGKVCEVTRNNDNETLHLGNVCTTWTKDTLVEKLQPYELENLEDVHVIED 1806 A EL V GK C VT + D++TL LGN+C TWTK+ L EKL+ Y +EN+ED+ ++ED Sbjct: 289 AVTELKNPVVNGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVEDLTLVED 348 Query: 1805 PKDRKRNRGYAFLNFSTHMDAVAACNKLQKGSLYLGTTVRADVAFAKSAVEPDEQIMSQV 1626 + NRG+AFL FS+ DA+ A +LQK + G A V+FA S ++P ++IM+QV Sbjct: 349 SNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVVFGVDRTAKVSFADSFIDPGDEIMAQV 408 Query: 1625 KSVFLDGLPASWDESQVQKQFQKYGEIEHVQLARNMPSAKRKDFGFVYFRTREAALTCID 1446 K+VF+DGLPASWDE +V++ +KYGEIE ++LARNMPSAKRKDFGFV F T +AA+TC Sbjct: 409 KTVFIDGLPASWDEDRVRELLKKYGEIEKIELARNMPSAKRKDFGFVTFDTHDAAVTCAK 468 Query: 1445 AVNKDGIGD-VRKVFLRATLKRPLQR-----------------RVPSAVGGWRGYDTDDY 1320 ++N +G+ K +RA L RPLQR V G W + Sbjct: 469 SINNAELGEGENKAKVRARLSRPLQRGKGKHISRGDFRPGRGGPVRGVRGSWARPALRSF 528 Query: 1319 NGWSTR-------PSGIGRSYSNRENREVESF---GRGHSPDHR-------IPGYNR--- 1200 G R P+ + R R+ R V + GR P R +P Y + Sbjct: 529 PGRGARGLGPRLPPAAVKRPIGFRDRRPVMAMPPRGRPLPPPSRSYDRRAPVPAYPKPNL 588 Query: 1199 ---YSTRGAVLETATSPVDIYGGRSRYSTRTSFETRYTPVEEYSSQFRRGSVRQAPTSAT 1029 Y R V + VD YG R R S+ Y RGS T Sbjct: 589 KRDYGRREEVPLRSRPAVD-YGSRVAPERRPSYRDDYA---------TRGSGYSDIPRNT 638 Query: 1028 SHSRPRAPYFEXXXXXXXXXRNYEDFPVTYSRSHVPSRGEXXXXXXXXXXXXYENNSVDT 849 S + R Y + + + + R PS E Sbjct: 639 SRTAARRTYED------------DAYGQRFERPPPPSYREGRPR---------------- 670 Query: 848 YDYPTPSRLKRPYSAVDD------DRIV--SRPLTRRSRSGGVDRDMGSYPVRVFSSFEE 693 DY + + KRPY A+DD D V SR S G + +Y R+ S Sbjct: 671 -DYDSIAGSKRPYGALDDVPPRYADASVRQSRARLDYEMSAGASQYGDAYGDRLGRSNLG 729 Query: 692 Y-----SRSTQDVHHGYDS 651 Y S S+QD H Y S Sbjct: 730 YGGSRSSMSSQDSHGLYSS 748 >ref|XP_002526479.1| RNA binding protein, putative [Ricinus communis] gi|223534154|gb|EEF35870.1| RNA binding protein, putative [Ricinus communis] Length = 784 Score = 306 bits (784), Expect = 2e-80 Identities = 207/551 (37%), Positives = 284/551 (51%), Gaps = 46/551 (8%) Frame = -1 Query: 2165 QKEYEVFVGGLDRDADEEDLRKVFKNMGEIVEVRLVKNKFSQKNKGFAFVRFATVEQAKR 1986 +KE+EVFVGGLD+DA E+DLRKVF +GE+ EVRL+ N ++KNKGFAF+RF+TVEQAK+ Sbjct: 210 RKEFEVFVGGLDKDATEDDLRKVFTRVGEVTEVRLMMNPQTKKNKGFAFLRFSTVEQAKK 269 Query: 1985 AAAELNYTQVRGKVCEVTRNNDNETLHLGNVCTTWTKDTLVEKLQPYELENLEDVHVIED 1806 A EL + GK C VT + D++TL LGN+C TWTK+ L EKL+ Y +EN+EDV ++ED Sbjct: 270 AVTELKNPVINGKQCGVTPSQDSDTLFLGNICKTWTKEALKEKLKHYGVENVEDVTLVED 329 Query: 1805 PKDRKRNRGYAFLNFSTHMDAVAACNKLQKGSLYLGTTVRADVAFAKSAVEPDEQIMSQV 1626 + NRG+AFL FS+ DA+ A +LQK + G A V+FA S ++P ++IM+QV Sbjct: 330 SNNEGMNRGFAFLEFSSRSDAMDAFKRLQKRDVLFGVDRPAKVSFADSFIDPGDEIMAQV 389 Query: 1625 KSVFLDGLPASWDESQVQKQFQKYGEIEHVQLARNMPSAKRKDFGFVYFRTREAALTCID 1446 K+VF+DGLPASWDE +V++ +K+GEIE ++LARNMPSAKRKDFGFV F + +AA+TC Sbjct: 390 KTVFVDGLPASWDEDRVRELLKKFGEIEKIELARNMPSAKRKDFGFVTFDSHDAAVTCAK 449 Query: 1445 AVNKDGIGD-VRKVFLRATLKRPLQRRVPSAVGGWRGYDTDDYNGW-------------- 1311 ++N +G+ K +RA L RPLQR G + D+ W Sbjct: 450 SINNAELGEGDNKAKVRARLSRPLQR------GKGKHASRADFRSWYGGRTARGPWVRPV 503 Query: 1310 -----STRPSGIGRSYSNRENR----EVESFGRGHSPDHR-------IPGYNRYSTRGAV 1179 P+ + R R+ R + GR P +R P Y + S + Sbjct: 504 RGIASRAAPTSVKRHVGLRDRRPPVMSMPVRGRPLPPPNRTYDRRAPAPSYPKSSLKRDY 563 Query: 1178 LETATSPVDIYGGRSRYSTRTSFETRYTPVEEYSSQFRRGSVRQAPTSATSHSRPRAPYF 999 P YS+R+ E R + ++YSS RGS TS S R Y Sbjct: 564 GRREELPPPRSRAPVDYSSRSVAERRQSYRDDYSS---RGSGYSDIPRGTSRSSARRAYV 620 Query: 998 EXXXXXXXXXRNYEDFPVTYSRSHVPSRGEXXXXXXXXXXXXYENNSVDTYDYPTPSRLK 819 + + E P +Y DY + S K Sbjct: 621 D-----DGYGQRLERHPPSYREGR-------------------------ARDYDSISGSK 650 Query: 818 RPYSAVDD--DRIVSRPLTRRSRSGGVDRDMG--------SYPVRVFSSFEEY-----SR 684 RPYSA+DD R R +D ++G +Y R+ S Y S Sbjct: 651 RPYSAMDDVPPRYADGGAGTRHSRARLDYELGPSASQYGDAYGDRIGRSSVGYGGSRSSL 710 Query: 683 STQDVHHGYDS 651 S+QD H Y S Sbjct: 711 SSQDSHGLYTS 721 >dbj|BAK02672.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 682 Score = 300 bits (767), Expect = 2e-78 Identities = 175/379 (46%), Positives = 236/379 (62%), Gaps = 3/379 (0%) Frame = -1 Query: 2165 QKEYEVFVGGLDRDADEEDLRKVFKNMGEIVEVRLVKNKFS-QKNKGFAFVRFATVEQAK 1989 +KEYEVFV GL R+A E+D+ GE+ EVRLV++ Q NKGFAF RFA V QA+ Sbjct: 99 RKEYEVFVFGLPREAMEDDVAAALTEAGEVEEVRLVRDPAQPQLNKGFAFARFAEVWQAR 158 Query: 1988 RAAAELNYTQVRGKVCEVTRNNDNETLHLGNVCTTWTKDTLVEKLQPYELENLEDVHVIE 1809 AA +L ++GK C + +NNDNETLHL N+C W+K+ L EKL+ +ELENLED+++IE Sbjct: 159 WAANDLRTAMIKGKACGICKNNDNETLHLRNICFDWSKEDLAEKLKTFELENLEDINLIE 218 Query: 1808 DPKDRKRNRGYAFLNFSTHMDAVAACNKLQKGSLYLGTTVRADVAFAKSAVEPDEQIMSQ 1629 P + RNRGYAFL+FS+H+DAVA KLQK L+LGT VRA ++F+ + + D+++M + Sbjct: 219 HPDRKGRNRGYAFLDFSSHVDAVAGFLKLQKRDLFLGTDVRAQISFS-NTISQDDKVMEK 277 Query: 1628 VKSVFLDGLPASWDESQVQKQFQKYGEIEHVQLARNMPSAKRKDFGFVYFRTREAALTCI 1449 VKSVFLDGLP WDE V+++F K+GEI+++QLARNM +AKRKDFGF+ F TR+AAL CI Sbjct: 278 VKSVFLDGLPPHWDEDDVREKFGKFGEIDNIQLARNMFTAKRKDFGFISFTTRQAALGCI 337 Query: 1448 DAVNKDGIGD-VRKVFLRATLKRPLQR-RVPSAVGGWRGYDTDDYNGWSTRPSGIGRSYS 1275 D VNK G+ K+ ++ATL+RP + PS W+G D + R IG+SY Sbjct: 338 DMVNKGRFGEGSGKIRMKATLQRPKPTFKKPS----WQG----DTHMLGVRRGFIGKSYG 389 Query: 1274 NRENREVESFGRGHSPDHRIPGYNRYSTRGAVLETATSPVDIYGGRSRYSTRTSFETRYT 1095 +RE H R P N + R + P+ + G S R Sbjct: 390 DREPHPNRF---RHLGPERRPYSNHSNYRHQPMVGRLPPMAVDDGERPVSGR-------- 438 Query: 1094 PVEEYSSQFRRGSVRQAPT 1038 EY S +RR S P+ Sbjct: 439 ---EYRSYYRRDSTVPDPS 454 >emb|CBI34075.3| unnamed protein product [Vitis vinifera] Length = 783 Score = 299 bits (766), Expect = 2e-78 Identities = 201/544 (36%), Positives = 281/544 (51%), Gaps = 21/544 (3%) Frame = -1 Query: 2165 QKEYEVFVGGLDRDADEEDLRKVFKNMGEIVEVRLVKNKFSQKNKGFAFVRFATVEQAKR 1986 +KE+EVFVGGLDRD E+DL F+ +G+I EVRL+KN +QKNKGFAF+RFATVEQA+R Sbjct: 183 RKEFEVFVGGLDRDVTEDDLFHFFRQVGDITEVRLMKNALTQKNKGFAFIRFATVEQARR 242 Query: 1985 AAAELNYTQVRGKVCEVTRNNDNETLHLGNVCTTWTKDTLVEKLQPYELENLEDVHVIED 1806 A EL + + GK C V + D++TL +GN+C TWTK + +KL Y ++ ED+ ++ED Sbjct: 243 AVNELKHPVINGKQCGVAPSQDSDTLFVGNICKTWTKVAVKDKLAYYGVDKYEDLTLVED 302 Query: 1805 PKDRKRNRGYAFLNFSTHMDAVAACNKLQKGSLYLGTTVRADVAFAKSAVEPDEQIMSQV 1626 K+ NRG+AFL+FS+ DA+ AC +LQK + GT A VAFA + +EPD++IMSQV Sbjct: 303 TKNEGMNRGFAFLDFSSRADALEACKRLQKRDVVFGTDRTARVAFADTFIEPDDEIMSQV 362 Query: 1625 KSVFLDGLPASWDESQVQKQFQKYGEIEHVQLARNMPSAKRKDFGFVYFRTREAALTCID 1446 +++FLDGLPA+WDE +V+ +K+G IE ++LARNMP+AKR DFGFV F T ++A+ C+D Sbjct: 363 RTIFLDGLPATWDEDRVRDYLKKFGRIEKIELARNMPAAKRTDFGFVTFDTHDSAVACVD 422 Query: 1445 AVNKDGIGD-VRKVFLRATLKRPLQRRVPSAVGGWRGYDTDDYNGWSTRPSGIGRSYSNR 1269 ++N + D R V +RA L RP Q RG G G GR + Sbjct: 423 SINNSELVDGERLVKVRARLSRPRQ----------RGKSAKHARGGYLVAQGSGRGFKAP 472 Query: 1268 ENREVESFGRGHSPDHRIPGYNRYSTRGAVLETATSPVDIYGGRSRYSTRTSFETRYTPV 1089 S R S G TRGA PV G R R+S TR Sbjct: 473 WG---SSSSRMDSWKFTGRGGRSMQTRGAYDGGLKRPV---GPRDRHSMMEMVPTRV--- 523 Query: 1088 EEYSSQFRRGSVRQAPTSATSHSRPRAPYFEXXXXXXXXXRNYEDF--PVTYSR------ 933 GS R+ P+ +S R R+P +E + E F P ++R Sbjct: 524 ---------GSRRRFPSPESSFGR-RSPVYEKSSTKREYIQRDESFSRPAVFARDPTERR 573 Query: 932 ---SHVPSRGEXXXXXXXXXXXXYENNSVDTYDYPTPSR-LKRPYSAVDDDRIVSRPLTR 765 + SRG + Y+ R L+RP + D R ++ Sbjct: 574 YYKDNYSSRGSEYLDSPPRNVSRAAGHRAPLYEDDDYDRYLERPTNYHDGHRHDYGSISS 633 Query: 764 RSRSGGVDRDMGSY----PVRVFSSFEEYSRSTQ----DVHHGYDSVGHERRYSSGRGAP 609 RS ++ S P+R + +Y S D H+G +S R GRG+ Sbjct: 634 SKRSHSAMEEVHSRYAEPPIRHSRARFDYGGSNSGLPYDDHYGSESTSERR---MGRGSR 690 Query: 608 RSYE 597 Y+ Sbjct: 691 LGYD 694