BLASTX nr result

ID: Coptis24_contig00007227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007227
         (865 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21105.3| unnamed protein product [Vitis vinifera]              112   1e-22
ref|XP_002519906.1| conserved hypothetical protein [Ricinus comm...    62   2e-07

>emb|CBI21105.3| unnamed protein product [Vitis vinifera]
          Length = 1012

 Score =  112 bits (279), Expect = 1e-22
 Identities = 81/236 (34%), Positives = 129/236 (54%), Gaps = 6/236 (2%)
 Frame = +2

Query: 5    FNNNQMAGPSPSVGFTSDSRLSSASTVKGKQSSYWCHSAAILH---DASDLRHSH---GK 166
            F   +  G S +    + S   S+S V  K     C+S  +L    DAS+  +S    GK
Sbjct: 726  FGFYKQMGSSGTFTGVAGSDHPSSSAVHDKS----CYSRQLLGMPPDASNASNSFNFSGK 781

Query: 167  TSFLQNNNHFDHGLLRSFNSSTLTAAPGLPLSEASTGFTSTNSVGRPSLTHMLSNNESVD 346
             S L ++   D+  ++S  S  + +   +P    STGF+S +S+  P+LT  L   ES+ 
Sbjct: 782  FSCLGSSG-LDNVFVKSI-SPPMGSGINVPSQAVSTGFSSASSLSVPNLTPSLPTKESIG 839

Query: 347  ISPHFLDENLRLLALRYALDPSKQKHPITSAEMEQQQGRLYSLSTELQQRGTTLGSLAAE 526
            +SP+ LDEN +LLALR+ L+ S ++H ITS  M Q++GR +S S++ + +G+ + +L ++
Sbjct: 840  VSPYLLDENFKLLALRHILELSNREHAITSLGMNQKEGR-FSSSSDPKVQGSVVDTLTSD 898

Query: 527  EPKEGPYNNINNGALEIAVKPLQTCSNHYVDGNYEKLGGVTGTKNWCNFSTPSRGI 694
            E K G        A E+ +K LQ+  NH + G+ EKL  V    NW + ST ++GI
Sbjct: 899  ELKHGLKLTSEQNASEVPLKLLQSGGNHRMGGDMEKLVPVADQNNWFDISTFTQGI 954


>ref|XP_002519906.1| conserved hypothetical protein [Ricinus communis]
            gi|223540952|gb|EEF42510.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 903

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 3/173 (1%)
 Frame = +2

Query: 20   MAGPSPSVGFTSDSRLSSASTVKGKQSSYWCHSAAILHDASDLRHSH---GKTSFLQNNN 190
            M  PS      +D+  S+ S +  K  + + HS+ +  D SD  +      K     N  
Sbjct: 691  MGNPSSYTRAMNDATYSNFSFMHDKNRNLY-HSSNVPPDVSDAANFSVYLQKGPCFGNGG 749

Query: 191  HFDHGLLRSFNSSTLTAAPGLPLSEASTGFTSTNSVGRPSLTHMLSNNESVDISPHFLDE 370
              DH +L S +S  + ++  +P  + S   TST     P LT  + N ES+ + P+ LD+
Sbjct: 750  LLDHAVLTSMDSRQILSSQSVP--KVSPSSTSTCI---PGLTLAMLNRESICMGPYLLDD 804

Query: 371  NLRLLALRYALDPSKQKHPITSAEMEQQQGRLYSLSTELQQRGTTLGSLAAEE 529
            N +LLAL   LD SKQ+H ++S   + +QG   + S    Q      S++ E+
Sbjct: 805  NQKLLALGQLLDLSKQQHAMSSFGRKIEQGNCSNSSNIKAQHSFVEPSVSEEQ 857


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