BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007226
         (1327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote...   220   7e-55
ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|2...   204   5e-50
ref|XP_002532469.1| double-stranded RNA binding protein, putativ...   173   8e-41
ref|XP_003544264.1| PREDICTED: uncharacterized protein LOC100798...   154   5e-35
ref|XP_004161611.1| PREDICTED: uncharacterized LOC101213863 [Cuc...   153   8e-35

>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4-like [Vitis
           vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
           product [Vitis vinifera]
          Length = 333

 Score =  220 bits (560), Expect = 7e-55
 Identities = 138/320 (43%), Positives = 181/320 (56%), Gaps = 34/320 (10%)
 Frame = +2

Query: 77  DECMHKNRLQQYAQKSKLPLPTYTT--ESFGKMPQFRSSVLVDGVNYMSAETFLHKKEAE 250
           +  MHKNRLQ+Y Q+S +PLP Y T  E F   P+FRS+VLVDG  Y S  TF H+K AE
Sbjct: 19  EHLMHKNRLQEYTQRSAIPLPIYQTVNEGFQHAPKFRSTVLVDGATYTSPNTFSHRKAAE 78

Query: 251 QNVAKVALESILKKIKDEGCLIIDEDMTYCKSILNEFAVKIGLEMPIYTTTESNGLIPVF 430
           Q+VA++ALE I KKIKDEGC +I ED  +CKSILNEFAVK+ LE P YTT +  GL+PVF
Sbjct: 79  QDVARLALEFISKKIKDEGCPLIREDTVFCKSILNEFAVKMNLEKPTYTTVQPEGLLPVF 138

Query: 431 TSTLDFHGKTYTGTPARSKKEAEQMGARSVIQFILGTEAE-SILSQIIKSKRKFFDAL-- 601
            S+L F+G TYTG   R+KKEAEQ+ AR+VI  ILG     ++LS+IIKSK K + AL  
Sbjct: 139 VSSLVFNGVTYTGDAGRNKKEAEQLAARTVILSILGNSGSGTLLSEIIKSKVKLYAALHR 198

Query: 602 ---PKVSKNAMLP------IVPCSKKSAQIRDASE--------------------IHSDV 694
              P      +LP      I PC  K  ++   ++                     H  V
Sbjct: 199 VKDPSYIHTGILPIGLTSGIPPCKGKEVEVAPGTDQLLPTAVSVPLSGQLVHVPVTHPPV 258

Query: 695 QPLKRAKLEHLCICSTGVVENLTSDQTELIGGLVTAAGTSGSKHPRKRNKEKGQRQMMTD 874
             L++ K       S+ V+    S    +    +  + T+G K  RK NK+K  +++ TD
Sbjct: 259 HELEKPKPN----VSSEVIAPPISFVPSVFEQPLVVSPTTGRKRNRK-NKKKANKKLRTD 313

Query: 875 GCLQQNADSIILASPCSIAQ 934
             L      +  ASPCS+AQ
Sbjct: 314 AQLPVAVLPLNQASPCSVAQ 333


>ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|222844689|gb|EEE82236.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  204 bits (518), Expect = 5e-50
 Identities = 127/282 (45%), Positives = 169/282 (59%), Gaps = 28/282 (9%)
 Frame = +2

Query: 77  DECMHKNRLQQYAQKSKLPLPTYTTESFGK--MPQFRSSVLVDGVNYMSAETFLHKKEAE 250
           D  M+KNRLQ+Y QKS L LP Y T + G   MP+FRS+V VDG  Y S +TFLH+K AE
Sbjct: 136 DNLMYKNRLQEYTQKSSLQLPVYQTLNEGPAHMPRFRSTVWVDGARYRSQKTFLHRKAAE 195

Query: 251 QNVAKVALESILKKIKDEGCLIIDEDMTYCKSILNEFAVKIGLEMPIYTTTESNGLIPVF 430
           Q+VA +ALESILK++KDEGC ++  D  +CKSILNEFAVK+  E P Y T +S GL+PVF
Sbjct: 196 QDVANLALESILKRVKDEGCPLLLGDTVFCKSILNEFAVKVNREKPTYNTVQSPGLLPVF 255

Query: 431 TSTLDFHGKTYTGTPARSKKEAEQMGARSVIQFILGTEAES-ILSQIIKSKRKFFDALPK 607
            STL F G +YTG   R+KKEAEQ+ AR+VI  ++G    S IL +IIKSK K + AL +
Sbjct: 256 ISTLVFDGVSYTGDAGRNKKEAEQLAARAVILSLIGNSGSSKILYEIIKSKSKLYAALDR 315

Query: 608 VS--KNAMLPIVP-------CSK---------KSAQIRDASEIHSDVQPLKRAKLEHLCI 733
           V    ++   IVP       CS+          +A +RDA+ + +++ P+   K+ H   
Sbjct: 316 VKDPSHSQPNIVPVAVKVGHCSETTVDQEQEVSTAVVRDAAPVSANIVPV-AVKVGH--- 371

Query: 734 CSTGVVENLTSDQTELIGGLV-------TAAGTSGSKHPRKR 838
           CS   V+      T ++   V        A+G   S H  KR
Sbjct: 372 CSETTVDQEQEVSTAVVRDAVPVSAIPPAASGMHPSHHDSKR 413


>ref|XP_002532469.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223527827|gb|EEF29925.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 289

 Score =  173 bits (439), Expect = 8e-41
 Identities = 114/287 (39%), Positives = 163/287 (56%), Gaps = 21/287 (7%)
 Frame = +2

Query: 77  DECMHKNRLQQYAQKSKLPLPTYTT--ESFGKMPQFRSSVLVDGVNYMSAETFLHKKEAE 250
           +  M+KNRLQ+Y Q+  L LP Y T  E +   P+FRS+VLVDG  Y S  TF H+KEAE
Sbjct: 10  EHLMYKNRLQEYTQRQSLQLPIYQTVNEGYPHDPKFRSTVLVDGEEYTSHNTFSHRKEAE 69

Query: 251 QNVAKVALESILKKIKDEGCLIIDEDMTY-----CKSILNEFAVKIGLEMPIYTTTESNG 415
           Q+VAK+AL SI +KIKDE   I DE  T+     CKSILNE+AVK+ LEMP Y T +  G
Sbjct: 70  QDVAKLALTSITEKIKDE---IKDEKFTHEDTVACKSILNEYAVKMQLEMPTYNTVKQGG 126

Query: 416 LIPVFTSTLDFHGKTYTGTPARSKKEAEQMGAR-SVIQFILGTEAESILSQIIKSKRKFF 592
           L P+F S+  F+G TY G   R+KKEAEQ+ AR +V+  +   E+  I+S+  KSKRK +
Sbjct: 127 LFPIFVSSSVFNGVTYNGDIGRTKKEAEQLAARAAVLSLLRNVESGEIISKFFKSKRKLY 186

Query: 593 DALPKV----SKNAMLPIVPCSKKSAQI---------RDASEIHSDVQPLKRAKLEHLCI 733
               K     ++N+ +P+V    K+  +           AS +H       + K E +C 
Sbjct: 187 VGFHKSDSQDAQNSNMPVVGKDIKTEALMVSNVVPIPEAASALHPPHHEFTKTKPEKIC- 245

Query: 734 CSTGVVENLTSDQTELIGGLVTAAGTSGSKHPRKRNKEKGQRQMMTD 874
                ++   +    + G  V  A  SG K  R++NK+K  +++ ++
Sbjct: 246 ---EGIDLPIAFVHPVSGQSVDVALESGKK--RRKNKKKPNKKLRSE 287


>ref|XP_003544264.1| PREDICTED: uncharacterized protein LOC100798730 [Glycine max]
          Length = 434

 Score =  154 bits (389), Expect = 5e-35
 Identities = 85/209 (40%), Positives = 131/209 (62%), Gaps = 5/209 (2%)
 Frame = +2

Query: 86  MHKNRLQQYAQKSKLPLPTYTTESFGK--MPQFRSSVLVDGVNYMSAETFLHKKEAEQNV 259
           M+KNRLQ++  KS +  P Y T + G+   P+FRS+V V  + Y S  TF HKK AE   
Sbjct: 1   MYKNRLQEFTSKSGINFPVYQTINEGQDHSPKFRSTVWVADMGYTSQSTFSHKKAAEHEA 60

Query: 260 AKVALESILKKIKDEGCLIIDEDMTYCKSILNEFAVKIGLEMPIYTTTES--NGLIPVFT 433
           A++ALESILK+ +DEG  ++++   + KSI+NE+A K+ +E P Y T +    G++P+F 
Sbjct: 61  ARLALESILKRTRDEGLSLVNQISPFSKSIMNEYADKLHVEQPTYNTDQQQLGGVLPIFI 120

Query: 434 STLDFHGKTYTGTPARSKKEAEQMGARSVIQFILG-TEAESILSQIIKSKRKFFDALPKV 610
           ++L F+G +YTG PAR+KKEAEQ  A++ I  I+G + + ++L +IIKSK  F+DA+   
Sbjct: 121 TSLVFNGTSYTGDPARTKKEAEQSAAKAAILSIMGDSSSGTVLVEIIKSKSIFYDAIKGK 180

Query: 611 SKNAMLPIVPCSKKSAQIRDASEIHSDVQ 697
            ++   P    S  +A     +  H D +
Sbjct: 181 GRSLSQPSAVLSTTNAGQISITLDHKDTE 209


>ref|XP_004161611.1| PREDICTED: uncharacterized LOC101213863 [Cucumis sativus]
          Length = 385

 Score =  153 bits (387), Expect = 8e-35
 Identities = 103/315 (32%), Positives = 163/315 (51%), Gaps = 32/315 (10%)
 Frame = +2

Query: 86   MHKNRLQQYAQKSKLPLPTYTT--ESFGKMPQFRSSVLVDGVNYMSAETFLHKKEAEQNV 259
            ++KN L +Y QK+K+ +P Y T  E    +P++RS+V+VD V+Y+S  TF +++ AEQ+ 
Sbjct: 77   VYKNHLHEYTQKAKIAVPVYQTIDEGSPSLPKYRSTVMVDEVHYVSPNTFRNRRAAEQDA 136

Query: 260  AKVALESILKKIKDEGCLIIDEDMTYCKSILNEFAVKIGLEMPIYTTTESNGLIPVFTST 439
            A+VA E I KK KD+  L++ ED+  CKSIL+E+  K+GLE PIYTT  + G +  F ST
Sbjct: 137  ARVAFEYISKKTKDDAFLLLREDLMLCKSILSEYTDKMGLERPIYTTKHNQGSVAFFQST 196

Query: 440  LDFHGKTYTGTPARSKKEAEQMGARSVI----QFILGTEAESILSQIIKSKRKFFDALPK 607
            L F G  YT    R+KKEAEQ+ AR+ I    +     +++  L  II SK +F   L K
Sbjct: 197  LVFDGVVYTSDLGRTKKEAEQLAARAAILSLHEDATNPKSQKALGDIIASKVRFHAMLQK 256

Query: 608  VSKNAMLPIVPCSKKSAQIRDASEIHSDVQPLKRAKLEHLCICSTGVVENLTSDQTELIG 787
            V  +      P S     +   +   ++ + LK A L+   +C   + E   + Q +   
Sbjct: 257  VKDSNFSQFQPKSMPENTVERVAMTVNEGKELKDAVLDGGVVCG-AISEACPTSQFQPEF 315

Query: 788  GLVTAAGTS------------------------GSKHPRKRNKEKGQRQMMTDGCLQQN- 892
                  G+S                        GSK  + +NK K ++++    C++   
Sbjct: 316  SATKPDGSSPLMRLPIEFVRSTLEEPVGYHATIGSKR-KSKNKRKARKKL----CMENRV 370

Query: 893  -ADSIILASPCSIAQ 934
              ++   A+PCS+A+
Sbjct: 371  ATETSQTAAPCSVAR 385