BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007218
         (1644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 ...   258   2e-66
ref|XP_002319561.1| predicted protein [Populus trichocarpa] gi|2...   230   7e-58
ref|XP_003520817.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...   223   2e-55
ref|XP_002513986.1| zinc finger protein, putative [Ricinus commu...   221   3e-55
ref|XP_002284024.1| PREDICTED: RING-H2 finger protein ATL11 [Vit...   220   7e-55

>ref|XP_002284899.1| PREDICTED: E3 ubiquitin-protein ligase ATL6 isoform 1 [Vitis
           vinifera] gi|147843962|emb|CAN83712.1| hypothetical
           protein VITISV_011102 [Vitis vinifera]
          Length = 420

 Score =  258 bits (660), Expect = 2e-66
 Identities = 145/281 (51%), Positives = 171/281 (60%), Gaps = 8/281 (2%)
 Frame = -1

Query: 963 RGLDPTLIETFPTFLYSVVKGLKIGKEVLECAVCLNEFEEDETLRLLPQCNHVFHPECID 784
           RGLD  ++ETFPTF YSVVKGLKIGK VLECAVCLNEFE++ETLRL+P+C+HVFHPECID
Sbjct: 113 RGLDQAVLETFPTFEYSVVKGLKIGKGVLECAVCLNEFEDNETLRLIPKCDHVFHPECID 172

Query: 783 AWLTSHTTCPVCRANL-------EVHSPSEATQVPGLLAEENLPTPEVSESQTQVLIQVV 625
           AWL SH TCPVCRANL       +  +  EA +  G    +         +  +V I+V 
Sbjct: 173 AWLASHVTCPVCRANLTEPAVPTDYSAAVEAAESAGESDHDGEDRRSEINAVREVSIRVA 232

Query: 624 DGEQNSDSKPDVINPTVLNSFPIQNRPVRSKSTRKGIAGIAGRFPRSHSTGHSLVQPGGN 445
           D E +    PDVINP   N    QNRP RSKSTR        +FPRSHSTGHSL+QPG N
Sbjct: 233 DDETDVQQAPDVINP---NQSLHQNRPPRSKSTR------PRKFPRSHSTGHSLIQPGEN 283

Query: 444 YERYTLKLPDDVRKQILNGKLTRTTSCVTFPRQGSV-SGWSATXXXXXXXXXXXXNHQLG 268
            ER+TLKLP+DVRKQI+   L RTTS +  PR GS   G+                 +L 
Sbjct: 284 CERFTLKLPEDVRKQIMKRALNRTTSLLVLPRDGSSRQGYRTAGEGSSRGKNFRRFDRL- 342

Query: 267 PFDRAGKSDRWGFSIAPPFFWRNXXXXXSKKGGDASVSIKT 145
             +R+GKSDRW FSI PPFF R       K   D   +  T
Sbjct: 343 --ERSGKSDRWTFSITPPFFSRASSLKSPKVAADGEATSST 381


>ref|XP_002319561.1| predicted protein [Populus trichocarpa] gi|222857937|gb|EEE95484.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  230 bits (587), Expect = 7e-58
 Identities = 125/256 (48%), Positives = 158/256 (61%)
 Frame = -1

Query: 969 APRGLDPTLIETFPTFLYSVVKGLKIGKEVLECAVCLNEFEEDETLRLLPQCNHVFHPEC 790
           A RGLDP +IETFPT +YSVVKGLKIGK  LECAVCLNEFE+DETLRL+P C+HVFHP+C
Sbjct: 85  ASRGLDPGVIETFPTLIYSVVKGLKIGKGALECAVCLNEFEDDETLRLIPNCDHVFHPDC 144

Query: 789 IDAWLTSHTTCPVCRANLEVHSPSEATQVPGLLAEENLPTPEVSESQTQVLIQVVDGEQN 610
           IDAWL SHTTCPVCRA+L     ++       L+E + P  ++      + I+  +G  N
Sbjct: 145 IDAWLESHTTCPVCRADL-----TKPADTVSQLSELHSPELDLEAQNGALGIEPENG--N 197

Query: 609 SDSKPDVINPTVLNSFPIQNRPVRSKSTRKGIAGIAGRFPRSHSTGHSLVQPGGNYERYT 430
           ++ +  V+ P   +     N+ +    TR   +G   RFPRSHSTGHSLVQPG N +R+T
Sbjct: 198 ANVEVQVVGPEPDDVSVNVNKTLNRNRTRGSRSGRPPRFPRSHSTGHSLVQPGENTDRFT 257

Query: 429 LKLPDDVRKQILNGKLTRTTSCVTFPRQGSVSGWSATXXXXXXXXXXXXNHQLGPFDRAG 250
           L+LP +VRKQ++N KL R+TS V  PRQGS      T              +L   D   
Sbjct: 258 LRLPVEVRKQVMNRKLNRSTSMVVLPRQGSSRKGYRTGVGEGSSRKVLNYKRLEKLDLEP 317

Query: 249 KSDRWGFSIAPPFFWR 202
           +SDRW F   P F  R
Sbjct: 318 RSDRWVFGRNPSFLAR 333


>ref|XP_003520817.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Glycine max]
          Length = 366

 Score =  223 bits (567), Expect = 2e-55
 Identities = 129/260 (49%), Positives = 157/260 (60%), Gaps = 4/260 (1%)
 Frame = -1

Query: 969 APRGLDPTLIETFPTFLYSVVKGLKIGKEVLECAVCLNEFEEDETLRLLPQCNHVFHPEC 790
           A RGLDP LI+TFP   YSVVK  KIGKE LECAVCL EFE+ ETLRLLP+C+HVFHPEC
Sbjct: 79  AARGLDPALIQTFPILEYSVVKIHKIGKEALECAVCLCEFEDTETLRLLPKCDHVFHPEC 138

Query: 789 IDAWLTSHTTCPVCRANLEVHSPSEATQVPGLLAEENLPTPEV----SESQTQVLIQVVD 622
           ID WL+SHTTCPVCRANL      +A  +    A   +P PE      ESQ    +Q   
Sbjct: 139 IDEWLSSHTTCPVCRANLLPTESEDA--IANANANGVVPVPETLTRDIESQNDA-VQAAP 195

Query: 621 GEQNSDSKPDVINPTVLNSFPIQNRPVRSKSTRKGIAGIAGRFPRSHSTGHSLVQPGGNY 442
            +QN+++ P +  P V++     NR      TR   +    RFPRSHSTGHSLVQPG N 
Sbjct: 196 EQQNAEADPVLPEPEVVSLDKTLNR----NRTRGSRSNRPRRFPRSHSTGHSLVQPGENT 251

Query: 441 ERYTLKLPDDVRKQILNGKLTRTTSCVTFPRQGSVSGWSATXXXXXXXXXXXXNHQLGPF 262
           +R+TLKLP +VRKQ++N +L R +S +  PR+GS      T                   
Sbjct: 252 DRFTLKLPLEVRKQLINRQLQRASSLIVLPREGSSRQGYRTGGEGSSRGKISRR-----L 306

Query: 261 DRAGKSDRWGFSIAPPFFWR 202
           DR+ KSDRW FS+  PFF R
Sbjct: 307 DRSLKSDRWIFSMTAPFFAR 326


>ref|XP_002513986.1| zinc finger protein, putative [Ricinus communis]
           gi|223547072|gb|EEF48569.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 436

 Score =  221 bits (564), Expect = 3e-55
 Identities = 130/268 (48%), Positives = 158/268 (58%), Gaps = 14/268 (5%)
 Frame = -1

Query: 963 RGLDPTLIETFPTFLYSVVKGLKIGKEVLECAVCLNEFEEDETLRLLPQCNHVFHPECID 784
           +GLDP +I TFPTFLYS VKG KIGKE LECAVCLNEFE+D+TLRL P+C+HVFHP+CID
Sbjct: 109 QGLDPEVINTFPTFLYSTVKGHKIGKESLECAVCLNEFEDDQTLRLTPKCSHVFHPDCID 168

Query: 783 AWLTSHTTCPVCRANLEVHSPSEATQVPGLLAEENLPTPEV----------SESQTQVLI 634
           AWL S+TTCPVCRANL       A          N     V           E+Q  VLI
Sbjct: 169 AWLASNTTCPVCRANLVPKPGDLAFDSVSFFEPNNTNNTSVEPDQLQERPNDETQNGVLI 228

Query: 633 QVVDGEQNSDSKPDVIN---PTVLN-SFPIQNRPVRSKSTRKGIAGIAGRFPRSHSTGHS 466
           +V D   +  S+P+V N   P V++ S   QNRP RS ST    A +   FPRSHSTGHS
Sbjct: 229 RVSD--DHDRSRPEVQNQQSPDVISLSTASQNRPPRSWSTGWRFARL---FPRSHSTGHS 283

Query: 465 LVQPGGNYERYTLKLPDDVRKQILNGKLTRTTSCVTFPRQGSVSGWSATXXXXXXXXXXX 286
           LVQPG N +R+TL+LP+DVR Q+LN  L R  SCV FPR  S      +           
Sbjct: 284 LVQPGENLDRFTLRLPEDVRSQLLNTHLNRAKSCVAFPRASSSKKGYRSRSGGGWRGRNF 343

Query: 285 XNHQLGPFDRAGKSDRWGFSIAPPFFWR 202
             ++   FD   + +  G ++ PPF  R
Sbjct: 344 YFYE--RFDEEVRPEHSGLTLTPPFISR 369


>ref|XP_002284024.1| PREDICTED: RING-H2 finger protein ATL11 [Vitis vinifera]
          Length = 409

 Score =  220 bits (561), Expect = 7e-55
 Identities = 130/280 (46%), Positives = 164/280 (58%), Gaps = 5/280 (1%)
 Frame = -1

Query: 969 APRGLDPTLIETFPTFLYSVVKGLKIGKEVLECAVCLNEFEEDETLRLLPQCNHVFHPEC 790
           A RGL+ + IE FPTF+YS VK  KIGKE LECAVCLNEFE+DETLRLLP+CNHVFH +C
Sbjct: 111 AARGLNSSDIERFPTFVYSAVKAHKIGKEGLECAVCLNEFEDDETLRLLPKCNHVFHSDC 170

Query: 789 IDAWLTSHTTCPVCRANLEVHSPSEATQVPG--LLAEENLPTPEVSESQTQVLIQVVDGE 616
           ID WL SH TCPVCRANL        T  PG    A   +  PE    ++   +++V+  
Sbjct: 171 IDLWLASHVTCPVCRANL--------TPKPGEKFCAPVPIFGPETESDESDTRVEIVETP 222

Query: 615 QNSDSKPDVINPTVLN-SFPIQNRPVRSKSTRKGIAGIAGRFPRSHSTGHSLVQPGGNYE 439
                  D  +P V+N      NRP RS+S R   A I G FPRSHSTGHSL+QPG N E
Sbjct: 223 NQVPIAVDAQSPDVMNHGRDTPNRPPRSRSIR---ARITGMFPRSHSTGHSLIQPGENRE 279

Query: 438 RYTLKLPDDVRKQILNGKLTRTTSCVTFPR-QGSVSGWSATXXXXXXXXXXXXNHQLGPF 262
           R+TL+LP+++R QI+N  L+RT S V  P  Q S  G+ A               Q   F
Sbjct: 280 RFTLRLPEEIRNQIMNTSLSRTKSWVALPGVQSSKRGYRANSVGSLRGKTYFNYEQ---F 336

Query: 261 DRAGKSDRWGFSIAPPFFWRNXXXXXSK-KGGDASVSIKT 145
           +   +++R GFS+ PPF  R         +G + S++ KT
Sbjct: 337 NGEVRAERLGFSMTPPFVPRTGSSHARSPQGCEGSLTPKT 376