BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007217
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241022.1| uncharacterized protein LOC100793233 [Glycin...   203   3e-50
ref|NP_001238430.1| uncharacterized protein LOC100500203 [Glycin...   202   5e-50
ref|XP_003525218.1| PREDICTED: probable small nuclear ribonucleo...   202   7e-50
ref|XP_003630987.1| Small nuclear ribonucleoprotein-like protein...   202   9e-50
ref|XP_002878480.1| predicted protein [Arabidopsis lyrata subsp....   200   3e-49

>ref|NP_001241022.1| uncharacterized protein LOC100793233 [Glycine max]
           gi|255633912|gb|ACU17317.1| unknown [Glycine max]
          Length = 108

 Score =  203 bits (517), Expect = 3e-50
 Identities = 101/108 (93%), Positives = 103/108 (95%)
 Frame = -3

Query: 756 MSRMEEDTPAGKNEEEEFNTGPLSVLMMSVKNNTQVLINVRNNRKLLGRVRAFDRHCNMV 577
           MSR  E+  AGKNEEEEFNTGPLSVLMMSVKNNTQVLIN RNN+KLLGRVRAFDRHCNMV
Sbjct: 1   MSRPMEEDAAGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV 60

Query: 576 LENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 433
           LENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 61  LENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 108


>ref|NP_001238430.1| uncharacterized protein LOC100500203 [Glycine max]
           gi|255629692|gb|ACU15195.1| unknown [Glycine max]
          Length = 117

 Score =  202 bits (515), Expect = 5e-50
 Identities = 104/109 (95%), Positives = 106/109 (97%), Gaps = 1/109 (0%)
 Frame = -3

Query: 756 MSR-MEEDTPAGKNEEEEFNTGPLSVLMMSVKNNTQVLINVRNNRKLLGRVRAFDRHCNM 580
           MSR MEEDT AGKNEEEEFNTGPLSVLMMSVKNNTQVLIN RNN+KLLGRVRAFDRHCNM
Sbjct: 1   MSRPMEEDT-AGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM 59

Query: 579 VLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 433
           VLENVREMWTEVPKTGKGKKK+QPVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 60  VLENVREMWTEVPKTGKGKKKSQPVNKDRFISKMFLRGDSVIIVLRNPK 108


>ref|XP_003525218.1| PREDICTED: probable small nuclear ribonucleoprotein Sm D2-like
           [Glycine max]
          Length = 108

 Score =  202 bits (514), Expect = 7e-50
 Identities = 104/109 (95%), Positives = 105/109 (96%), Gaps = 1/109 (0%)
 Frame = -3

Query: 756 MSR-MEEDTPAGKNEEEEFNTGPLSVLMMSVKNNTQVLINVRNNRKLLGRVRAFDRHCNM 580
           MSR MEEDT  GKNEEEEFNTGPLSVLMMSVKNNTQVLIN RNN+KLLGRVRAFDRHCNM
Sbjct: 1   MSRPMEEDT-VGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNM 59

Query: 579 VLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 433
           VLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 60  VLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 108


>ref|XP_003630987.1| Small nuclear ribonucleoprotein-like protein [Medicago truncatula]
           gi|355525009|gb|AET05463.1| Small nuclear
           ribonucleoprotein-like protein [Medicago truncatula]
           gi|388506390|gb|AFK41261.1| unknown [Medicago
           truncatula]
          Length = 108

 Score =  202 bits (513), Expect = 9e-50
 Identities = 100/108 (92%), Positives = 102/108 (94%)
 Frame = -3

Query: 756 MSRMEEDTPAGKNEEEEFNTGPLSVLMMSVKNNTQVLINVRNNRKLLGRVRAFDRHCNMV 577
           MSR  E+   GKNEEEEFNTGPLSVLMMSVKNNTQVLIN RNN+KLLGRVRAFDRHCNMV
Sbjct: 1   MSRPMEEDAVGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMV 60

Query: 576 LENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 433
           LENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK
Sbjct: 61  LENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 108


>ref|XP_002878480.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324318|gb|EFH54739.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 109

 Score =  200 bits (509), Expect = 3e-49
 Identities = 99/105 (94%), Positives = 100/105 (95%)
 Frame = -3

Query: 747 MEEDTPAGKNEEEEFNTGPLSVLMMSVKNNTQVLINVRNNRKLLGRVRAFDRHCNMVLEN 568
           MEEDT  GK EEEEFNTGPLSVLMMSVKNNTQVLIN RNNRKLLGRVRAFDRHCNMVLEN
Sbjct: 5   MEEDTTQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLEN 64

Query: 567 VREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK 433
           VREMWTEVPKTGKGKKKA PVN+DRFISKMFLRGDSVIIVLRNPK
Sbjct: 65  VREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK 109