BLASTX nr result

ID: Coptis24_contig00007213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007213
         (1557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81128.1| hypothetical protein VITISV_005391 [Vitis vinifera]   331   4e-88
ref|XP_002264776.1| PREDICTED: uncharacterized protein LOC100254...   325   3e-86
ref|XP_002299199.1| predicted protein [Populus trichocarpa] gi|2...   304   4e-80
ref|XP_002303935.1| predicted protein [Populus trichocarpa] gi|2...   304   4e-80
ref|XP_003545831.1| PREDICTED: uncharacterized protein LOC100793...   285   2e-74

>emb|CAN81128.1| hypothetical protein VITISV_005391 [Vitis vinifera]
          Length = 350

 Score =  331 bits (848), Expect = 4e-88
 Identities = 193/336 (57%), Positives = 230/336 (68%), Gaps = 6/336 (1%)
 Frame = -3

Query: 1399 IEWREMEKVEEFNQDVPSLC----NKENSSKK--AQGLTITXXXXXXXSDRLKRDEWSEG 1238
            +EW +M++  E NQ+ P L     +KE+S +K    G +         +DRLKRDEWSEG
Sbjct: 27   LEWEDMDR--EPNQEDPPLLPTNNSKEDSPRKPLGGGSSGGGGGGAGGADRLKRDEWSEG 84

Query: 1237 AVSTLLDAYESKWVLRNRAKLKGHDWEDVARHVSSRANSTKSPKTQTQCKNKIESMKKRY 1058
            AVS+LL+AYE+KWVLRNRAKLKGHDWE+VARHVSSRAN TKSPKTQTQCKNKIESMKKRY
Sbjct: 85   AVSSLLEAYETKWVLRNRAKLKGHDWEEVARHVSSRANCTKSPKTQTQCKNKIESMKKRY 144

Query: 1057 RSESAATDASSWPLFQRLDLLLRCRTHXXXXXXXXXXXXPLLVLDXXXXXXXXXXXXXXX 878
            RSESA  DASSWPLFQRLDLLLR                PL++L+               
Sbjct: 145  RSESATPDASSWPLFQRLDLLLR---GSGAPPMPPPVTTPLMLLE-------TLPPQPPP 194

Query: 877  XXXXXXXXXAIHPNSHEPNGVEPLAKEDVMGEKTAENESEKISMEMDSSTPMSDSVXXXX 698
                      I  NSHE NG+   AKED +G K +++ S+K++ME DSSTP   S     
Sbjct: 195  PPSQPPHPLMITQNSHESNGLHRAAKEDGVGTKLSDHASDKVAMETDSSTPALYS--DKE 252

Query: 697  XXXXXXXXXXXXXKVGRQREDWDVAESIRWLAEVMVRSEQARMDTIKEVEKMRVEAEAKR 518
                         K  R+REDW+VAESIRWLAEV+VRSEQARMDT++E+E+MRVEA+AKR
Sbjct: 253  KLKSKKIKMRIEKKKRRRREDWEVAESIRWLAEVVVRSEQARMDTMRELERMRVEADAKR 312

Query: 517  GEMDLKRTEILANTQLQIAQLFAGNGKGTGSSLRIG 410
            GEMDLKRTEI+ANTQL+IA+LFAG+GKG  SSLRIG
Sbjct: 313  GEMDLKRTEIIANTQLEIARLFAGSGKGVDSSLRIG 348


>ref|XP_002264776.1| PREDICTED: uncharacterized protein LOC100254951 [Vitis vinifera]
          Length = 319

 Score =  325 bits (832), Expect = 3e-86
 Identities = 190/326 (58%), Positives = 223/326 (68%), Gaps = 6/326 (1%)
 Frame = -3

Query: 1369 EFNQDVPSLC----NKENSSKK--AQGLTITXXXXXXXSDRLKRDEWSEGAVSTLLDAYE 1208
            E NQ+ P L     +KE+S +K    G +         +DRLKRDEWSEGAVS+LL+AYE
Sbjct: 4    EPNQEDPPLLPTNNSKEDSPRKPLGGGSSGGGGGGAGGADRLKRDEWSEGAVSSLLEAYE 63

Query: 1207 SKWVLRNRAKLKGHDWEDVARHVSSRANSTKSPKTQTQCKNKIESMKKRYRSESAATDAS 1028
            +KWVLRNRAKLKGHDWE+VARHVSSRAN TKSPKTQTQCKNKIESMKKRYRSESA  DAS
Sbjct: 64   TKWVLRNRAKLKGHDWEEVARHVSSRANCTKSPKTQTQCKNKIESMKKRYRSESATPDAS 123

Query: 1027 SWPLFQRLDLLLRCRTHXXXXXXXXXXXXPLLVLDXXXXXXXXXXXXXXXXXXXXXXXXA 848
            SWPLFQRLDLLLR                PL++L+                         
Sbjct: 124  SWPLFQRLDLLLR---GSGAPPIPPPVTTPLMLLE-------TLPPQPPPPPSQPPHTLM 173

Query: 847  IHPNSHEPNGVEPLAKEDVMGEKTAENESEKISMEMDSSTPMSDSVXXXXXXXXXXXXXX 668
            I  NSHE NG+   AKED +G K +++ S+K++ME DSSTP   S               
Sbjct: 174  ITQNSHESNGLHRAAKEDGVGTKLSDHASDKVAMETDSSTPALYS--DKEKLKSKKIKMR 231

Query: 667  XXXKVGRQREDWDVAESIRWLAEVMVRSEQARMDTIKEVEKMRVEAEAKRGEMDLKRTEI 488
               K  R+REDW+VAESIRWLAEV+VRSEQARMDT++E+E+MRVEA+AKRGEMDLKRTEI
Sbjct: 232  IEKKKRRRREDWEVAESIRWLAEVVVRSEQARMDTMRELERMRVEADAKRGEMDLKRTEI 291

Query: 487  LANTQLQIAQLFAGNGKGTGSSLRIG 410
            +ANTQL+IA+LFAG+GKG  SSLRIG
Sbjct: 292  IANTQLEIARLFAGSGKGVDSSLRIG 317


>ref|XP_002299199.1| predicted protein [Populus trichocarpa] gi|222846457|gb|EEE84004.1|
            predicted protein [Populus trichocarpa]
          Length = 302

 Score =  304 bits (779), Expect = 4e-80
 Identities = 174/302 (57%), Positives = 201/302 (66%), Gaps = 15/302 (4%)
 Frame = -3

Query: 1270 DRLKRDEWSEGAVSTLLDAYESKWVLRNRAKLKGHDWEDVARHVSSRANSTKSPKTQTQC 1091
            DRLKRDEWSEGAVSTLL+AYESKW+LRNRAKLKGHDWEDVARHVSSRAN TKSPKTQTQC
Sbjct: 1    DRLKRDEWSEGAVSTLLEAYESKWILRNRAKLKGHDWEDVARHVSSRANCTKSPKTQTQC 60

Query: 1090 KNKIESMKKRYRSESAATDASSWPLFQRLDLLLRCRT----------HXXXXXXXXXXXX 941
            KNKIESMKKRYRSESA  DASSWPL+ RLDLLLR  +          H            
Sbjct: 61   KNKIESMKKRYRSESATADASSWPLYPRLDLLLRGNSATAAVISSPQHQQPAIPASSNPP 120

Query: 940  PLLVLD----XXXXXXXXXXXXXXXXXXXXXXXXAIHPNSHEPNGVEPLAKEDVMGEKTA 773
             +L++D                             I  NSH  NGV+   KED +  K +
Sbjct: 121  LILLVDPTLGVPQPPPPSMTPPPPPPPSPPPQVIVIAQNSHGSNGVDRGQKEDGVDTKLS 180

Query: 772  ENESEKISMEM-DSSTPMSDSVXXXXXXXXXXXXXXXXXKVGRQREDWDVAESIRWLAEV 596
             + S+K +ME+ DSSTP   S                  +   +RE+W++A+SIRWLAEV
Sbjct: 181  NHVSDKNAMEVTDSSTPALYS--DKKKTRSKKLKMRKERRKWGKREEWEIADSIRWLAEV 238

Query: 595  MVRSEQARMDTIKEVEKMRVEAEAKRGEMDLKRTEILANTQLQIAQLFAGNGKGTGSSLR 416
            +VRSEQARMDT++EVEKMR+EAEAKRGEMDLKRTEI+A TQL+IA+LFAG GKG  SSLR
Sbjct: 239  VVRSEQARMDTMREVEKMRIEAEAKRGEMDLKRTEIIAKTQLEIAKLFAGGGKGVDSSLR 298

Query: 415  IG 410
            IG
Sbjct: 299  IG 300


>ref|XP_002303935.1| predicted protein [Populus trichocarpa] gi|222841367|gb|EEE78914.1|
            predicted protein [Populus trichocarpa]
          Length = 306

 Score =  304 bits (779), Expect = 4e-80
 Identities = 171/307 (55%), Positives = 202/307 (65%), Gaps = 20/307 (6%)
 Frame = -3

Query: 1270 DRLKRDEWSEGAVSTLLDAYESKWVLRNRAKLKGHDWEDVARHVSSRANSTKSPKTQTQC 1091
            DRLKRDEWSEGAVSTLL+AYE+KW+LRNRAKLKGHDWEDVA HVSSRAN TKSPKTQTQC
Sbjct: 1    DRLKRDEWSEGAVSTLLEAYENKWILRNRAKLKGHDWEDVAHHVSSRANCTKSPKTQTQC 60

Query: 1090 KNKIESMKKRYRSESAATDASSWPLFQRLDLLLRCRT--------------HXXXXXXXX 953
            KNKIESMKKRYRSES+  DASSWPL+ RLDLLLR  +              H        
Sbjct: 61   KNKIESMKKRYRSESSTADASSWPLYPRLDLLLRGNSATAAVTPSPQVPPQHQQPSIPTS 120

Query: 952  XXXXPLLVLDXXXXXXXXXXXXXXXXXXXXXXXXAIH------PNSHEPNGVEPLAKEDV 791
                 +L++D                          H       NSH  NGV+  AK D 
Sbjct: 121  ANPPLMLLMDQSPLAVTQPPAPPLAPPPPPLPPPLPHQTIVTAQNSHGSNGVDRGAKGDG 180

Query: 790  MGEKTAENESEKISMEMDSSTPMSDSVXXXXXXXXXXXXXXXXXKVGRQREDWDVAESIR 611
            M  K +++ S+K +M+ DSSTP   S                  +  R+RE+W++A+SIR
Sbjct: 181  MDTKLSDHVSDKNAMDTDSSTPALYS--DKEKLRSKKLKKKMEKRKRRKREEWEMADSIR 238

Query: 610  WLAEVMVRSEQARMDTIKEVEKMRVEAEAKRGEMDLKRTEILANTQLQIAQLFAGNGKGT 431
            WLAEV+VRSEQARMDT++E+EKMR+EAEAKRGEMDLKRTEI+ANTQL+IA+LFAG G+G 
Sbjct: 239  WLAEVVVRSEQARMDTMRELEKMRIEAEAKRGEMDLKRTEIIANTQLEIAKLFAGVGRGV 298

Query: 430  GSSLRIG 410
             SSLRIG
Sbjct: 299  DSSLRIG 305


>ref|XP_003545831.1| PREDICTED: uncharacterized protein LOC100793978 [Glycine max]
          Length = 334

 Score =  285 bits (730), Expect = 2e-74
 Identities = 166/293 (56%), Positives = 195/293 (66%), Gaps = 6/293 (2%)
 Frame = -3

Query: 1270 DRLKRDEWSEGAVSTLLDAYESKWVLRNRAKLKGHDWEDVARHVSSRANSTKSPKTQTQC 1091
            DR+KRDEWSEGAVSTLL+AYE+KWVLRNRAKLKGHDWEDVARHVS+RAN TKSPKT TQC
Sbjct: 43   DRVKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVARHVSARANCTKSPKTSTQC 102

Query: 1090 KNKIESMKKRYRSESAAT---DASSWPLFQRLDLLLRCRTHXXXXXXXXXXXXPLLVLDX 920
            KNK+ESMKKRYRSESAAT    +SSWPL+ RLDLLLR  T                 +  
Sbjct: 103  KNKVESMKKRYRSESAATADHASSSWPLYSRLDLLLR-GTGPVLSSPPPPPAMMPAAMPV 161

Query: 919  XXXXXXXXXXXXXXXXXXXXXXXAIHPNSHEPNGV-EPLAKEDVMGEKTAENESEKISME 743
                                   A   NSH  NG+ E LAKED +G K+++  S K  ++
Sbjct: 162  LSPVEPSQPPQLSPPPAAPSGPLANAQNSHGSNGIDEKLAKEDGLGTKSSDQVSSKNPLD 221

Query: 742  MDSSTPMSDSVXXXXXXXXXXXXXXXXXKVGRQREDW-DVAESIRWLAEVMVRSEQARMD 566
             DSSTP   S                    GR+R++  ++AES+RWL E M+RSEQARMD
Sbjct: 222  TDSSTPALYS--KKDGLRCNKRKKKTIDNTGRRRKECVEIAESLRWLTEAMIRSEQARMD 279

Query: 565  TIKEVEKMRVEAEAKRGEMDLKRTEILANTQLQIAQLFAG-NGKGTGSSLRIG 410
            T+KE+E+MRVEAEAKRGEMDLKRTEI+ANTQL+IA++FA  N KG  SSLRIG
Sbjct: 280  TMKEIERMRVEAEAKRGEMDLKRTEIIANTQLEIARIFASVNNKGVDSSLRIG 332


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