BLASTX nr result

ID: Coptis24_contig00007212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007212
         (1099 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276068.1| PREDICTED: urease accessory protein UreD [Vi...   426   e-117
ref|XP_002326633.1| predicted protein [Populus trichocarpa] gi|2...   409   e-112
ref|XP_002533423.1| Urease accessory protein ureD, putative [Ric...   407   e-111
dbj|BAH19312.1| urease accessory protein ureD [Morus alba]            397   e-108
emb|CAC85464.1| putative urease accessory protein D [Solanum lyc...   391   e-106

>ref|XP_002276068.1| PREDICTED: urease accessory protein UreD [Vitis vinifera]
           gi|297738000|emb|CBI27201.3| unnamed protein product
           [Vitis vinifera]
          Length = 291

 Score =  426 bits (1094), Expect = e-117
 Identities = 214/290 (73%), Positives = 242/290 (83%), Gaps = 2/290 (0%)
 Frame = +1

Query: 97  METGFVVVEKVRGKSSVTQSFSKYPLKLIIPNKVGSNKTDAVWIYSLTYGGGIVSGDIIS 276
           METGFV VEK+ G+S+VT+ FSKYPLK IIP KVGS+ TDAVWIYSLTYGGGIVSGD IS
Sbjct: 1   METGFVAVEKIGGRSTVTRCFSKYPLKFIIPRKVGSSITDAVWIYSLTYGGGIVSGDSIS 60

Query: 277 CGLTVGDDCTTVFTTQSSTKVYKSVGFKCSEQNLEARIGSNALLVVVPDPVTCFSTARYS 456
           CG T+GD CTTV TTQ+STKVYKSVG KCSEQ LEARIGSNALL ++PDPVTCFSTARYS
Sbjct: 61  CGFTIGDGCTTVLTTQASTKVYKSVGSKCSEQVLEARIGSNALLAIIPDPVTCFSTARYS 120

Query: 457 QKQVFRLASNSSVVIVDWITSGRHEIGESWDFKLYKSTNHIFLEDQPLFLDSVLLEDGSI 636
           QKQVFR+ S+S +VIVDWITSGRH  GE WDF+LYKS+NHIFL+DQPLFLD+VLLE GS+
Sbjct: 121 QKQVFRVFSDSCLVIVDWITSGRHATGEKWDFELYKSSNHIFLDDQPLFLDTVLLEQGSV 180

Query: 637 TSISERMQGYQVIAMVILLGPKLKEVQIQVKEHVKRMMYEQLYTPTLGCKKRKSFGQ--T 810
           +SI+ERM+ YQVIAM++LLGP LK +Q QV+E VKRMM EQL  P+    + +S      
Sbjct: 181 SSIAERMKDYQVIAMLVLLGPTLKHIQNQVQEDVKRMMSEQLRFPSTATGRHRSSDHRLL 240

Query: 811 KPDMIASCSAFGPKGIGVVVRISAITTESVYRFLHLQLTSMEPLLGVSPY 960
           KP  IASCS FGPKGIGVVVRI+A TTESVY FL  QL  MEPLLGV PY
Sbjct: 241 KPTFIASCSPFGPKGIGVVVRIAATTTESVYSFLRHQLAGMEPLLGVPPY 290


>ref|XP_002326633.1| predicted protein [Populus trichocarpa] gi|222833955|gb|EEE72432.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  409 bits (1050), Expect = e-112
 Identities = 205/291 (70%), Positives = 240/291 (82%), Gaps = 4/291 (1%)
 Frame = +1

Query: 103 TGFVVVEKVRGKSSVTQSFSKYPLKLIIPNKVGSNKTDAVWIYSLTYGGGIVSGDIISCG 282
           TG VVVEKV GKS+VT+ FSKYPLK I+P+K G  KTD+VWIYSLTYGGGIVSGD ISC 
Sbjct: 4   TGKVVVEKVGGKSTVTRCFSKYPLKFIVPSKAGPCKTDSVWIYSLTYGGGIVSGDSISCE 63

Query: 283 LTVGDDCTTVFTTQSSTKVYKSVGFKCSEQNLEARIGSNALLVVVPDPVTCFSTARYSQK 462
             +GD CTTVFTTQ+STKVYKSVG +CS Q LE  +GS+ALL ++PDPVTCFSTARYSQK
Sbjct: 64  FEIGDGCTTVFTTQASTKVYKSVGSRCSAQFLEVTVGSDALLAILPDPVTCFSTARYSQK 123

Query: 463 QVFRLASNSSVVIVDWITSGRHEIGESWDFKLYKSTNHIFLED-QPLFLDSVLLEDGSIT 639
           QVFR+  +S++VIVDW TSGRHE GE WDF LYKSTN+IFL+D QPLFLD+VLLE  SI+
Sbjct: 124 QVFRVLLDSNLVIVDWFTSGRHESGEKWDFDLYKSTNNIFLDDNQPLFLDTVLLEQQSIS 183

Query: 640 SISERMQGYQVIAMVILLGPKLKEVQIQVKEHVKRMMYEQLYTP---TLGCKKRKSFGQT 810
            I+ERM+GYQVIAM+ILLGPKLK +Q +V+E+VKRMM EQL+ P     GC +  S   T
Sbjct: 184 PITERMRGYQVIAMIILLGPKLKHIQSEVQENVKRMMSEQLHIPFTGLSGCAQSNSRHFT 243

Query: 811 KPDMIASCSAFGPKGIGVVVRISAITTESVYRFLHLQLTSMEPLLGVSPYH 963
           KP  IASCS FGPKGIGV+VR++A+TTESVY+FL  QL  MEPL+GV PYH
Sbjct: 244 KPSFIASCSVFGPKGIGVIVRVAAMTTESVYKFLQHQLVGMEPLIGVLPYH 294


>ref|XP_002533423.1| Urease accessory protein ureD, putative [Ricinus communis]
           gi|223526736|gb|EEF28966.1| Urease accessory protein
           ureD, putative [Ricinus communis]
          Length = 294

 Score =  407 bits (1047), Expect = e-111
 Identities = 209/293 (71%), Positives = 240/293 (81%), Gaps = 5/293 (1%)
 Frame = +1

Query: 97  METGFVVVEKVRGKSSVTQSFSKYPLKLIIPNKVGSNKTDAVWIYSLTYGGGIVSGDIIS 276
           METG V V+KV GKS+VT+ FSKYPLK IIP KVG +KTDAVWIY+LTYGGGIVSGD IS
Sbjct: 1   METGKVTVDKVGGKSTVTRCFSKYPLKFIIPTKVGPSKTDAVWIYTLTYGGGIVSGDSIS 60

Query: 277 CGLTVGDDCTTVFTTQSSTKVYKSVGFKCSEQNLEARIGSNALLVVVPDPVTCFSTARYS 456
           C   +G  CT V TTQ+STKVYKS+G KCSEQ LEARIGS++LL V+PDPVTCFSTARYS
Sbjct: 61  CEFIIGHGCTAVLTTQASTKVYKSLGSKCSEQILEARIGSDSLLAVIPDPVTCFSTARYS 120

Query: 457 QKQVFRLASNSSVVIVDWITSGRHEIGESWDFKLYKSTNHIFL-EDQPLFLDSVLLEDGS 633
           QKQ+FR+ S+SS+V+VDWITSGRHE GE WDF+LYKS+N+IFL +DQPLFLD+VLLE GS
Sbjct: 121 QKQIFRVLSDSSLVVVDWITSGRHESGEKWDFELYKSSNNIFLDDDQPLFLDTVLLEQGS 180

Query: 634 ITSISERMQGYQVIAMVILLGPKLKEVQIQVKEHVKRMMYEQLYTPTLG----CKKRKSF 801
              I ERM+ YQVIAMVILLGPKLK +Q QV+E+VKR+M EQL+ P  G     K   S 
Sbjct: 181 AGIIRERMRDYQVIAMVILLGPKLKHIQSQVQENVKRIMSEQLHMPFSGLSGNVKSNSST 240

Query: 802 GQTKPDMIASCSAFGPKGIGVVVRISAITTESVYRFLHLQLTSMEPLLGVSPY 960
             TKP  IASCS FGPKGIG+VVRI+A+TTESVYRFL  QL  MEPL+GV PY
Sbjct: 241 FFTKPPFIASCSLFGPKGIGIVVRIAAMTTESVYRFLQHQLADMEPLIGVLPY 293


>dbj|BAH19312.1| urease accessory protein ureD [Morus alba]
          Length = 304

 Score =  397 bits (1020), Expect = e-108
 Identities = 200/301 (66%), Positives = 243/301 (80%), Gaps = 6/301 (1%)
 Frame = +1

Query: 79  TELEKKME-TGFVVVEKVRGKSSVTQSFSKYPLKLIIPNKVGSNKTDAVWIYSLTYGGGI 255
           +EL K+ME TG  VVEKV  KS+VT+ +SKYPLK I+P K+G++KTDAVWIY+LTYGGGI
Sbjct: 4   SELRKEMEQTGTAVVEKVGDKSTVTRCYSKYPLKFIVPKKLGNSKTDAVWIYTLTYGGGI 63

Query: 256 VSGDIISCGLTVGDDCTTVFTTQSSTKVYKSVGFKCSEQNLEARIGSNALLVVVPDPVTC 435
           VSGD ISC  T+ D CTTV TTQ+STKVYKS+G KCS Q LEAR+G+NALL V+PDPVTC
Sbjct: 64  VSGDSISCDFTISDGCTTVLTTQASTKVYKSLGSKCSVQVLEARVGNNALLAVIPDPVTC 123

Query: 436 FSTARYSQKQVFRLASNSSVVIVDWITSGRHEIGESWDFKLYKSTNHIFLED-QPLFLDS 612
           FSTARY+QKQVFR+ S++S+++VDW+TSGRHE GE WDF LYKSTNHIFLED +PL LD+
Sbjct: 124 FSTARYTQKQVFRMLSDASLIVVDWVTSGRHESGEKWDFDLYKSTNHIFLEDNEPLLLDT 183

Query: 613 VLLEDGSITSISERMQGYQVIAMVILLGPKLKEVQIQVKEHVKRMMYEQL--YTPTLG-- 780
           VLLE GS++SI+ERMQ YQV+AMV+  GPK+K +Q QV+E V+RMM EQL  Y+P     
Sbjct: 184 VLLEKGSMSSITERMQEYQVVAMVVFWGPKMKHIQNQVQEEVRRMMTEQLQFYSPASAQR 243

Query: 781 CKKRKSFGQTKPDMIASCSAFGPKGIGVVVRISAITTESVYRFLHLQLTSMEPLLGVSPY 960
            K+  ++   KP+ I S S FGP+G GVVVRI A TTESVY FL  QL  +EPLLG+SPY
Sbjct: 244 MKRSSTYCTNKPNFIVSSSVFGPQGKGVVVRIVATTTESVYTFLQHQLAGLEPLLGLSPY 303

Query: 961 H 963
           H
Sbjct: 304 H 304


>emb|CAC85464.1| putative urease accessory protein D [Solanum lycopersicum]
          Length = 297

 Score =  391 bits (1005), Expect = e-106
 Identities = 196/293 (66%), Positives = 237/293 (80%), Gaps = 5/293 (1%)
 Frame = +1

Query: 97  METGFVVVEKVRGKSSVTQSFSKYPLKLIIPNKVGSNKTDAVWIYSLTYGGGIVSGDIIS 276
           METG V+VEKVRGKS++T+ FSKYPLK I P  V  ++TD VWIY++TYGGGIVSGD I 
Sbjct: 1   METGKVIVEKVRGKSTLTKCFSKYPLKFINPKNVAPSQTDVVWIYAITYGGGIVSGDSIV 60

Query: 277 CGLTVGDDCTTVFTTQSSTKVYKSVGFKCSEQNLEARIGSNALLVVVPDPVTCFSTARYS 456
           C  T+GD CTTV TTQ+STKVYK+VG K SEQ LEARIGSNA L V+PDPVTCFSTA+YS
Sbjct: 61  CDYTIGDGCTTVLTTQASTKVYKAVGTKISEQVLEARIGSNAFLAVIPDPVTCFSTAKYS 120

Query: 457 QKQVFRLASNSSVVIVDWITSGRHEIGESWDFKLYKSTNHIF-LEDQPLFLDSVLLEDGS 633
           QKQVF++ S+SS+++VDWITSGRHE GE W+F LY+S N+IF  +D+PLFLD+ LLE G+
Sbjct: 121 QKQVFKVMSDSSLLLVDWITSGRHETGEKWNFDLYRSMNNIFHNDDEPLFLDTALLEQGT 180

Query: 634 ITSISERMQGYQVIAMVILLGPKLKEVQIQVKEHVKRMMYEQLYTPTLGCKKRKS----F 801
            + I+ERMQ YQVIAMVILLGPKLK VQ Q++E VK++M + L+ PT+G ++  S     
Sbjct: 181 CSDIAERMQDYQVIAMVILLGPKLKHVQNQIQEDVKKIMSQSLHMPTIGSRQSTSRHNDH 240

Query: 802 GQTKPDMIASCSAFGPKGIGVVVRISAITTESVYRFLHLQLTSMEPLLGVSPY 960
             TKP  +ASCS FGPKGIGVV RI+A+TTESVY FL  QL+SMEPLLGV PY
Sbjct: 241 HLTKPSFLASCSIFGPKGIGVVTRIAAMTTESVYNFLQHQLSSMEPLLGVKPY 293


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