BLASTX nr result

ID: Coptis24_contig00007198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007198
         (1039 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266803.1| PREDICTED: transcription factor VIP1-like [V...   297   3e-78
gb|ABK96202.1| unknown [Populus trichocarpa]                          275   1e-71
emb|CBI18550.3| unnamed protein product [Vitis vinifera]              268   2e-69
dbj|BAA97100.1| bZIP transcriptional activator RSG [Nicotiana ta...   261   2e-67
gb|ADO23656.1| repression of shoot growth [Solanum tuberosum]         255   1e-65

>ref|XP_002266803.1| PREDICTED: transcription factor VIP1-like [Vitis vinifera]
          Length = 350

 Score =  297 bits (760), Expect = 3e-78
 Identities = 164/247 (66%), Positives = 188/247 (76%), Gaps = 8/247 (3%)
 Frame = +3

Query: 39  INHFRSLSVGSEFFDEMGFQPSXXXXXXXXXXXXXX-----RKMLHRHSFSMDGGLSSSF 203
           INHFRSLSV ++FF+ +GF P+                   R   HRHS SMDG  ++SF
Sbjct: 105 INHFRSLSVDADFFEGLGFSPAATAAAGESSDGGGKATQEKRVHHHRHSNSMDGS-TTSF 163

Query: 204 EADSL---DSAKKAMAPERLAELALIDPKRAKRILANRQSAARSKERKIRYTSELERKVQ 374
           E +SL   D AKKAM P+RLAELALIDPKRAKRILANRQSAARSKERKIRYT+ELERKVQ
Sbjct: 164 EVESLIGSDGAKKAMGPDRLAELALIDPKRAKRILANRQSAARSKERKIRYTNELERKVQ 223

Query: 375 TLQTEATTLSAQVTMLQRDTTGLTSENKELKLRLQSMEQQAHLRDALNEALRDEVQRLKI 554
           TLQTEATTLSAQVTMLQRDTTGLT+ENKELKLRLQ+MEQQA LR+ALNEALR+EVQRLKI
Sbjct: 224 TLQTEATTLSAQVTMLQRDTTGLTAENKELKLRLQAMEQQASLREALNEALREEVQRLKI 283

Query: 555 ATGEAPPINGSIYNRARPPTYFSQPRPFGHFNISQNHQQQLNMPPSSANGQPVGGQSQHG 734
           ATG+ P +NG+ +NR  PP + S P+   HF  +Q  QQQL+MP SS N Q + GQ Q  
Sbjct: 284 ATGQIPAVNGNSFNRGLPPQFSSHPQALHHFG-AQQQQQQLHMPQSSTNNQSLNGQPQPS 342

Query: 735 TMDFNQR 755
            +DFNQR
Sbjct: 343 FLDFNQR 349


>gb|ABK96202.1| unknown [Populus trichocarpa]
          Length = 340

 Score =  275 bits (704), Expect = 1e-71
 Identities = 157/247 (63%), Positives = 178/247 (72%), Gaps = 8/247 (3%)
 Frame = +3

Query: 39  INHFRSLSVGSEFFDEMGFQPSXXXXXXXXXXXXXXRKML----HRHSFSMDGGLSSSFE 206
           +NH RSLS+ S+FFD +G   +               K      HRHS+SMDG    SFE
Sbjct: 101 VNHLRSLSMDSDFFDGLGLGAAGGADEKFDGKAVAGEKRAANPHHRHSYSMDG----SFE 156

Query: 207 ADSL--DSAKKAMAPERLAELALIDPKRAKRILANRQSAARSKERKIRYTSELERKVQTL 380
            DS+  D  KKAMAP+RLAEL+LIDPKRAKRILANRQSAARSKERKIRYT ELERKVQTL
Sbjct: 157 VDSIMIDGVKKAMAPDRLAELSLIDPKRAKRILANRQSAARSKERKIRYTGELERKVQTL 216

Query: 381 QTEATTLSAQVTMLQRDTTGLTSENKELKLRLQSMEQQAHLRDALNEALRDEVQRLKIAT 560
           QTEATTLSAQVTMLQRDTTGLT ENKELKLRLQ+MEQQAHLRDALNEALR+EVQRLKIAT
Sbjct: 217 QTEATTLSAQVTMLQRDTTGLTVENKELKLRLQAMEQQAHLRDALNEALREEVQRLKIAT 276

Query: 561 GEAPPINGSIYNRARPPTYFSQP--RPFGHFNISQNHQQQLNMPPSSANGQPVGGQSQHG 734
           G+ P +NG+ +NR  PP + S    + FG    +Q  QQQL+MP  S  GQ   GQ    
Sbjct: 277 GQVPAVNGNPFNRGLPPQFSSHQGLQTFG----NQQAQQQLHMPQPSTTGQTHNGQPHPS 332

Query: 735 TMDFNQR 755
             +F+QR
Sbjct: 333 FSNFSQR 339


>emb|CBI18550.3| unnamed protein product [Vitis vinifera]
          Length = 195

 Score =  268 bits (685), Expect = 2e-69
 Identities = 144/196 (73%), Positives = 163/196 (83%), Gaps = 3/196 (1%)
 Frame = +3

Query: 177 MDGGLSSSFEADSL---DSAKKAMAPERLAELALIDPKRAKRILANRQSAARSKERKIRY 347
           MDG  ++SFE +SL   D AKKAM P+RLAELALIDPKRAKRILANRQSAARSKERKIRY
Sbjct: 1   MDGS-TTSFEVESLIGSDGAKKAMGPDRLAELALIDPKRAKRILANRQSAARSKERKIRY 59

Query: 348 TSELERKVQTLQTEATTLSAQVTMLQRDTTGLTSENKELKLRLQSMEQQAHLRDALNEAL 527
           T+ELERKVQTLQTEATTLSAQVTMLQRDTTGLT+ENKELKLRLQ+MEQQA LR+ALNEAL
Sbjct: 60  TNELERKVQTLQTEATTLSAQVTMLQRDTTGLTAENKELKLRLQAMEQQASLREALNEAL 119

Query: 528 RDEVQRLKIATGEAPPINGSIYNRARPPTYFSQPRPFGHFNISQNHQQQLNMPPSSANGQ 707
           R+EVQRLKIATG+ P +NG+ +NR  PP + S P+   HF  +Q  QQQL+MP SS N Q
Sbjct: 120 REEVQRLKIATGQIPAVNGNSFNRGLPPQFSSHPQALHHFG-AQQQQQQLHMPQSSTNNQ 178

Query: 708 PVGGQSQHGTMDFNQR 755
            + GQ Q   +DFNQR
Sbjct: 179 SLNGQPQPSFLDFNQR 194


>dbj|BAA97100.1| bZIP transcriptional activator RSG [Nicotiana tabacum]
          Length = 350

 Score =  261 bits (668), Expect = 2e-67
 Identities = 149/246 (60%), Positives = 175/246 (71%), Gaps = 7/246 (2%)
 Frame = +3

Query: 39  INHFRSLSVGSEFFDEMGFQPSXXXXXXXXXXXXXXRKML------HRHSFSMDGGLSS- 197
           +NHFRSLSV ++FFD + F  +                 +      HRHS SMDG  S+ 
Sbjct: 107 LNHFRSLSVDADFFDGLEFGATTPGAAAEEEKKVFGSSSVSGSGTRHRHSNSMDGSFSTA 166

Query: 198 SFEADSLDSAKKAMAPERLAELALIDPKRAKRILANRQSAARSKERKIRYTSELERKVQT 377
           SFEA+   S KKAMAP+RLAELALIDPKRAKRILANRQSAARSKERKIRYTSELERKVQT
Sbjct: 167 SFEAECSSSVKKAMAPDRLAELALIDPKRAKRILANRQSAARSKERKIRYTSELERKVQT 226

Query: 378 LQTEATTLSAQVTMLQRDTTGLTSENKELKLRLQSMEQQAHLRDALNEALRDEVQRLKIA 557
           LQTEATTLSAQ+T+LQRD +GLT+ENKELKLRLQ++EQ AHLRDALNEALR+E+QRLKIA
Sbjct: 227 LQTEATTLSAQITVLQRDNSGLTNENKELKLRLQALEQGAHLRDALNEALREELQRLKIA 286

Query: 558 TGEAPPINGSIYNRARPPTYFSQPRPFGHFNISQNHQQQLNMPPSSANGQPVGGQSQHGT 737
            G+    NG   NR   P +  QP+ F         QQQ +MP S+ + Q +GGQ+Q   
Sbjct: 287 AGQILGANG---NRGPRPHFPPQPQSFVQCGSHHAQQQQQHMPHSTTSTQNIGGQTQPSF 343

Query: 738 MDFNQR 755
           M+FN R
Sbjct: 344 MNFNNR 349


>gb|ADO23656.1| repression of shoot growth [Solanum tuberosum]
          Length = 337

 Score =  255 bits (652), Expect = 1e-65
 Identities = 148/247 (59%), Positives = 177/247 (71%), Gaps = 10/247 (4%)
 Frame = +3

Query: 39  INHFRSLSVGSEFFDEMGFQPSXXXXXXXXXXXXXXRKML---------HRHSFSMDGGL 191
           +NHFRSLSV ++FFD + F  +              +KM+         HRHS SMDG  
Sbjct: 100 LNHFRSLSVDADFFDGLEFGEAGATTPAASEE----KKMMGLGSGSSSRHRHSNSMDGSF 155

Query: 192 SS-SFEADSLDSAKKAMAPERLAELALIDPKRAKRILANRQSAARSKERKIRYTSELERK 368
           S+ SFEA+S  S KKAMAP+RLAELALIDPKRAKRILANRQSAARSKERKIRYTSELERK
Sbjct: 156 SAASFEAES--SVKKAMAPDRLAELALIDPKRAKRILANRQSAARSKERKIRYTSELERK 213

Query: 369 VQTLQTEATTLSAQVTMLQRDTTGLTSENKELKLRLQSMEQQAHLRDALNEALRDEVQRL 548
           VQTLQ+EATTLSAQ+T+LQRD +GLT+ENKELKLRLQ++EQ+AHLRDALNEALR+E+Q L
Sbjct: 214 VQTLQSEATTLSAQITVLQRDNSGLTTENKELKLRLQALEQEAHLRDALNEALREELQHL 273

Query: 549 KIATGEAPPINGSIYNRARPPTYFSQPRPFGHFNISQNHQQQLNMPPSSANGQPVGGQSQ 728
           KI  G+    NGS   R   P +  QP+ F         QQQ +MP S+ + Q +GGQ+Q
Sbjct: 274 KITAGQMSAANGS---RGARPHFPPQPQSFVQCGNHHTQQQQPHMPQSTTSTQNIGGQTQ 330

Query: 729 HGTMDFN 749
              M+FN
Sbjct: 331 PSFMNFN 337


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