BLASTX nr result
ID: Coptis24_contig00007197
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00007197 (595 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001050253.1| Os03g0385900 [Oryza sativa Japonica Group] g... 117 2e-24 gb|AAT85310.1| small subunit ribosomal protein, putative [Oryza ... 117 2e-24 dbj|BAA12798.1| mitochondrial ribosomal protein S11 [Oryza sativ... 117 2e-24 ref|NP_001043554.1| Os01g0612100 [Oryza sativa Japonica Group] g... 112 5e-23 ref|YP_005090385.1| ribosomal protein S11 (mitochondrion) [Phoen... 111 8e-23 >ref|NP_001050253.1| Os03g0385900 [Oryza sativa Japonica Group] gi|108708513|gb|ABF96308.1| ribosomal protein S11 containing protein, expressed [Oryza sativa Japonica Group] gi|113548724|dbj|BAF12167.1| Os03g0385900 [Oryza sativa Japonica Group] gi|215706382|dbj|BAG93238.1| unnamed protein product [Oryza sativa Japonica Group] Length = 332 Score = 117 bits (292), Expect = 2e-24 Identities = 65/144 (45%), Positives = 90/144 (62%), Gaps = 3/144 (2%) Frame = +2 Query: 53 FSTSTRLF-QSKWAKIKDVARFPSIL--QSNTFVTVTDSKGNIKTGASIGCLKDFKGKSR 223 F T +R+F + K + +K F +L ++ TFVTVTD +GN KTGAS GCL+D KG+SR Sbjct: 191 FGTPSRIFDEHKQSLVKGKRDFVHVLLKRNKTFVTVTDVRGNKKTGASAGCLEDRKGRSR 250 Query: 224 LSKFAAKALAEHVGRSARNLGXXXXXXXXXXXXXXXXXXQAIMSFKDGFTFGESNKRTTE 403 LSK+AA+A AEHVGR+AR +G + I+SF++GF + + Sbjct: 251 LSKYAAEATAEHVGRAARKMGLKSVVMKVKGTTFFNKKKKVILSFREGF---RGERVREQ 307 Query: 404 DGILSIRDVTQIPHNGCRLPKKVR 475 ++ I DVTQ+PHNGCRLPK+ R Sbjct: 308 SPVVLIHDVTQLPHNGCRLPKQRR 331 >gb|AAT85310.1| small subunit ribosomal protein, putative [Oryza sativa Japonica Group] Length = 366 Score = 117 bits (292), Expect = 2e-24 Identities = 65/144 (45%), Positives = 90/144 (62%), Gaps = 3/144 (2%) Frame = +2 Query: 53 FSTSTRLF-QSKWAKIKDVARFPSIL--QSNTFVTVTDSKGNIKTGASIGCLKDFKGKSR 223 F T +R+F + K + +K F +L ++ TFVTVTD +GN KTGAS GCL+D KG+SR Sbjct: 225 FGTPSRIFDEHKQSLVKGKRDFVHVLLKRNKTFVTVTDVRGNKKTGASAGCLEDRKGRSR 284 Query: 224 LSKFAAKALAEHVGRSARNLGXXXXXXXXXXXXXXXXXXQAIMSFKDGFTFGESNKRTTE 403 LSK+AA+A AEHVGR+AR +G + I+SF++GF + + Sbjct: 285 LSKYAAEATAEHVGRAARKMGLKSVVMKVKGTTFFNKKKKVILSFREGF---RGERVREQ 341 Query: 404 DGILSIRDVTQIPHNGCRLPKKVR 475 ++ I DVTQ+PHNGCRLPK+ R Sbjct: 342 SPVVLIHDVTQLPHNGCRLPKQRR 365 >dbj|BAA12798.1| mitochondrial ribosomal protein S11 [Oryza sativa Japonica Group] gi|125586487|gb|EAZ27151.1| hypothetical protein OsJ_11086 [Oryza sativa Japonica Group] Length = 254 Score = 117 bits (292), Expect = 2e-24 Identities = 65/144 (45%), Positives = 90/144 (62%), Gaps = 3/144 (2%) Frame = +2 Query: 53 FSTSTRLF-QSKWAKIKDVARFPSIL--QSNTFVTVTDSKGNIKTGASIGCLKDFKGKSR 223 F T +R+F + K + +K F +L ++ TFVTVTD +GN KTGAS GCL+D KG+SR Sbjct: 113 FGTPSRIFDEHKQSLVKGKRDFVHVLLKRNKTFVTVTDVRGNKKTGASAGCLEDRKGRSR 172 Query: 224 LSKFAAKALAEHVGRSARNLGXXXXXXXXXXXXXXXXXXQAIMSFKDGFTFGESNKRTTE 403 LSK+AA+A AEHVGR+AR +G + I+SF++GF + + Sbjct: 173 LSKYAAEATAEHVGRAARKMGLKSVVMKVKGTTFFNKKKKVILSFREGF---RGERVREQ 229 Query: 404 DGILSIRDVTQIPHNGCRLPKKVR 475 ++ I DVTQ+PHNGCRLPK+ R Sbjct: 230 SPVVLIHDVTQLPHNGCRLPKQRR 253 >ref|NP_001043554.1| Os01g0612100 [Oryza sativa Japonica Group] gi|21104682|dbj|BAB93272.1| putative small subunit ribosomal protein [Oryza sativa Japonica Group] gi|113533085|dbj|BAF05468.1| Os01g0612100 [Oryza sativa Japonica Group] Length = 257 Score = 112 bits (280), Expect = 5e-23 Identities = 62/142 (43%), Positives = 87/142 (61%), Gaps = 3/142 (2%) Frame = +2 Query: 53 FSTSTRLF-QSKWAKIKDVARFPSIL--QSNTFVTVTDSKGNIKTGASIGCLKDFKGKSR 223 F T + +F + K + +K F +L ++ TFVTVTD +GN KTGAS GCL+D KG+SR Sbjct: 116 FGTPSHIFDEHKQSLVKGKRDFVYVLLKRNKTFVTVTDVRGNRKTGASAGCLEDKKGRSR 175 Query: 224 LSKFAAKALAEHVGRSARNLGXXXXXXXXXXXXXXXXXXQAIMSFKDGFTFGESNKRTTE 403 LSK+A +A AEHVGR+AR +G + I+SF++GF + + Sbjct: 176 LSKYATEATAEHVGRAARKMGLKSVVMKVKGTVFFNKKKKVILSFREGF---RGERVREQ 232 Query: 404 DGILSIRDVTQIPHNGCRLPKK 469 ++ I DVTQ+PHNGCRLPK+ Sbjct: 233 SPVVFIHDVTQLPHNGCRLPKQ 254 >ref|YP_005090385.1| ribosomal protein S11 (mitochondrion) [Phoenix dactylifera] gi|343478437|gb|AEM43925.1| ribosomal protein S11 (mitochondrion) [Phoenix dactylifera] Length = 171 Score = 111 bits (278), Expect = 8e-23 Identities = 59/118 (50%), Positives = 80/118 (67%) Frame = +2 Query: 122 ILQSNTFVTVTDSKGNIKTGASIGCLKDFKGKSRLSKFAAKALAEHVGRSARNLGXXXXX 301 ++++ TFVTVTD++GN KTGAS GCL++ KG+SRLS++AA+A AEHVGRSAR +G Sbjct: 27 LIKNKTFVTVTDARGNKKTGASAGCLEERKGRSRLSRYAAEATAEHVGRSARKMGLKSVV 86 Query: 302 XXXXXXXXXXXXXQAIMSFKDGFTFGESNKRTTEDGILSIRDVTQIPHNGCRLPKKVR 475 + I+S+++GF GE + I+ I DVTQ+PHNGCRLPKK R Sbjct: 87 MKVKGSTYFRKKNKVILSWREGFR-GEG--VGDQSPIMYIHDVTQLPHNGCRLPKKRR 141