BLASTX nr result

ID: Coptis24_contig00007164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007164
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloproteas...    91   1e-16
ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16
ref|XP_003532440.1| PREDICTED: ATP-dependent zinc metalloproteas...    85   5e-15
ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinu...    84   9e-15
ref|XP_004162678.1| PREDICTED: ATP-dependent zinc metalloproteas...    84   2e-14

>ref|XP_002266075.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH [Vitis vinifera]
            gi|296090151|emb|CBI39970.3| unnamed protein product
            [Vitis vinifera]
          Length = 907

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 46/74 (62%), Positives = 57/74 (77%)
 Frame = -3

Query: 425  LRRHHAVLLKTIKVLLDKKEISGEQIEYILDQYPAETPVRHLLEEESLGSLPFFEMEQER 246
            LRRHHA LLKT+KVL+++KEISGE+I++IL+ YP +TPV  LLEEE+ GSLPF   E   
Sbjct: 834  LRRHHAALLKTVKVLVEQKEISGEEIDFILNSYPPQTPVSCLLEEENPGSLPFGRQEHGL 893

Query: 245  DFELSLLTESKGDL 204
              E +LLT SKG L
Sbjct: 894  KLEDALLTPSKGFL 907


>ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|222846721|gb|EEE84268.1|
            predicted protein [Populus trichocarpa]
          Length = 932

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/72 (58%), Positives = 57/72 (79%)
 Frame = -3

Query: 425  LRRHHAVLLKTIKVLLDKKEISGEQIEYILDQYPAETPVRHLLEEESLGSLPFFEMEQER 246
            L+RHHA LLK +KVLL++KEISGE+I+YIL+ YP +T +  LLEEE+ G LPFF+ E E 
Sbjct: 858  LKRHHAALLKAVKVLLNQKEISGEEIDYILNNYPPQTRLSLLLEEENPGILPFFKQELEN 917

Query: 245  DFELSLLTESKG 210
            + + +LLT S+G
Sbjct: 918  ELDYALLTTSEG 929


>ref|XP_003532440.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 2,
            chloroplastic-like [Glycine max]
          Length = 925

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/70 (64%), Positives = 56/70 (80%)
 Frame = -3

Query: 425  LRRHHAVLLKTIKVLLDKKEISGEQIEYILDQYPAETPVRHLLEEESLGSLPFFEMEQER 246
            LRRHHA LLKTIKVLLD+KEISGE+IE+IL++YP +TP+ +LLEEE  G+LP F  EQ  
Sbjct: 853  LRRHHAALLKTIKVLLDQKEISGEEIEFILNKYPPQTPI-YLLEEEYAGNLP-FTREQVH 910

Query: 245  DFELSLLTES 216
            D E +L  +S
Sbjct: 911  DLEYALKIQS 920


>ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinus communis]
            gi|223549884|gb|EEF51372.1| Cell division protein ftsH,
            putative [Ricinus communis]
          Length = 925

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/72 (55%), Positives = 55/72 (76%)
 Frame = -3

Query: 425  LRRHHAVLLKTIKVLLDKKEISGEQIEYILDQYPAETPVRHLLEEESLGSLPFFEMEQER 246
            LRRHHA LLK +KVL+++KEISG +I+YIL+ YP +T +  LLEEE+ GSLPF + EQ  
Sbjct: 854  LRRHHAALLKAVKVLINQKEISGNEIDYILNNYPPQTCISLLLEEENPGSLPFTKNEQGH 913

Query: 245  DFELSLLTESKG 210
            + +  LLT ++G
Sbjct: 914  EVDYELLTSAEG 925


>ref|XP_004162678.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH 2-like [Cucumis
            sativus]
          Length = 962

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/78 (52%), Positives = 56/78 (71%), Gaps = 8/78 (10%)
 Frame = -3

Query: 425  LRRHHAVLLKTIKVLLDKKEISGEQIEYILDQYPAETPVRHLLEEESLGSLPFF------ 264
            L+RHHA LLK +KVL+ ++EISGE+I++ILD YP +TP+  +L+EE+ GSLPF       
Sbjct: 880  LQRHHAALLKAVKVLITQEEISGEEIDFILDNYPQQTPISVVLQEENPGSLPFVKRKREN 939

Query: 263  --EMEQERDFELSLLTES 216
              E EQERDFE   + +S
Sbjct: 940  EQEREQERDFEYGAIPQS 957


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