BLASTX nr result

ID: Coptis24_contig00007139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007139
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318138.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
dbj|BAD72182.1| hypothetical protein [Oryza sativa Japonica Group]     59   5e-07
dbj|BAD72177.1| hypothetical protein [Oryza sativa Japonica Group]     58   9e-07
dbj|BAD72178.1| hypothetical protein [Oryza sativa Japonica Group]     57   2e-06

>ref|XP_002318138.1| predicted protein [Populus trichocarpa] gi|222858811|gb|EEE96358.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 15/91 (16%)
 Frame = -1

Query: 237 VLPEDIVFQILVCLPVMSLFRFKSVCKSWRILIESSNFIDQQLNHHSHQYSNYNFV---- 70
           +LPED++ +IL  LPV +L +FK VCKSW  +I SSNFI   LN+H +   + + +    
Sbjct: 8   LLPEDVIIEILSLLPVKTLLQFKCVCKSWYGIITSSNFISLHLNNHYNNIKSGHLLAHFV 67

Query: 69  -----------TLSPLRHYGPPPNRRGINLC 10
                      +L+ L H G  P  RG  LC
Sbjct: 68  CPQLLELFQDESLTDLSHQGLDPPIRG-RLC 97


>ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|222858810|gb|EEE96357.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 15/91 (16%)
 Frame = -1

Query: 237 VLPEDIVFQILVCLPVMSLFRFKSVCKSWRILIESSNFIDQQLNHHSHQYSNYNFV---- 70
           +LPED++ +IL  LPV +L +FK VCKSW  +I SSNFI   LN+H +   + + +    
Sbjct: 8   LLPEDVIIEILSLLPVKTLLQFKCVCKSWYGIITSSNFISLHLNNHYNNIKSGHLLAHFV 67

Query: 69  -----------TLSPLRHYGPPPNRRGINLC 10
                      +L+ L H G  P  RG  LC
Sbjct: 68  CPQLLELFQDESLTDLSHQGLDPPIRG-RLC 97


>dbj|BAD72182.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 234

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/71 (43%), Positives = 44/71 (61%)
 Frame = -1

Query: 234 LPEDIVFQILVCLPVMSLFRFKSVCKSWRILIESSNFIDQQLNHHSHQYSNYNFVTLSPL 55
           +PEDIV +IL+ LPV S+ RF+SVCKSWR ++    F+  QL HHS   + +   ++  L
Sbjct: 40  IPEDIVEEILLRLPVKSILRFRSVCKSWRAMVADPRFVRLQL-HHSTTAARHYPPSMLIL 98

Query: 54  RHYGPPPNRRG 22
             +  P  RRG
Sbjct: 99  ADWCLPEQRRG 109


>dbj|BAD72177.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 511

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/71 (40%), Positives = 45/71 (63%)
 Frame = -1

Query: 234 LPEDIVFQILVCLPVMSLFRFKSVCKSWRILIESSNFIDQQLNHHSHQYSNYNFVTLSPL 55
           +PED++ QIL+ LPV S+ RF+SVCKSWR ++   +F+  QL HHS   + ++  ++  L
Sbjct: 40  IPEDVIEQILLRLPVKSILRFRSVCKSWRSMVAEPHFVRLQL-HHSTTAARHHPPSMLVL 98

Query: 54  RHYGPPPNRRG 22
             +  P   RG
Sbjct: 99  ADWCVPEQWRG 109


>dbj|BAD72178.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 346

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 30/71 (42%), Positives = 44/71 (61%)
 Frame = -1

Query: 234 LPEDIVFQILVCLPVMSLFRFKSVCKSWRILIESSNFIDQQLNHHSHQYSNYNFVTLSPL 55
           +PEDIV +IL+ LPV S+ RF+SVCKSWR ++    F+  QL+ HS   + +   ++  L
Sbjct: 40  IPEDIVEEILLRLPVKSILRFRSVCKSWRAVVADPRFVRLQLD-HSTTAARHRPPSMLIL 98

Query: 54  RHYGPPPNRRG 22
             +  P  RRG
Sbjct: 99  ADWCVPEQRRG 109


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