BLASTX nr result
ID: Coptis24_contig00007139
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00007139 (258 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002318138.1| predicted protein [Populus trichocarpa] gi|2... 59 3e-07 ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|2... 59 3e-07 dbj|BAD72182.1| hypothetical protein [Oryza sativa Japonica Group] 59 5e-07 dbj|BAD72177.1| hypothetical protein [Oryza sativa Japonica Group] 58 9e-07 dbj|BAD72178.1| hypothetical protein [Oryza sativa Japonica Group] 57 2e-06 >ref|XP_002318138.1| predicted protein [Populus trichocarpa] gi|222858811|gb|EEE96358.1| predicted protein [Populus trichocarpa] Length = 272 Score = 59.3 bits (142), Expect = 3e-07 Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 15/91 (16%) Frame = -1 Query: 237 VLPEDIVFQILVCLPVMSLFRFKSVCKSWRILIESSNFIDQQLNHHSHQYSNYNFV---- 70 +LPED++ +IL LPV +L +FK VCKSW +I SSNFI LN+H + + + + Sbjct: 8 LLPEDVIIEILSLLPVKTLLQFKCVCKSWYGIITSSNFISLHLNNHYNNIKSGHLLAHFV 67 Query: 69 -----------TLSPLRHYGPPPNRRGINLC 10 +L+ L H G P RG LC Sbjct: 68 CPQLLELFQDESLTDLSHQGLDPPIRG-RLC 97 >ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|222858810|gb|EEE96357.1| predicted protein [Populus trichocarpa] Length = 367 Score = 59.3 bits (142), Expect = 3e-07 Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 15/91 (16%) Frame = -1 Query: 237 VLPEDIVFQILVCLPVMSLFRFKSVCKSWRILIESSNFIDQQLNHHSHQYSNYNFV---- 70 +LPED++ +IL LPV +L +FK VCKSW +I SSNFI LN+H + + + + Sbjct: 8 LLPEDVIIEILSLLPVKTLLQFKCVCKSWYGIITSSNFISLHLNNHYNNIKSGHLLAHFV 67 Query: 69 -----------TLSPLRHYGPPPNRRGINLC 10 +L+ L H G P RG LC Sbjct: 68 CPQLLELFQDESLTDLSHQGLDPPIRG-RLC 97 >dbj|BAD72182.1| hypothetical protein [Oryza sativa Japonica Group] Length = 234 Score = 58.5 bits (140), Expect = 5e-07 Identities = 31/71 (43%), Positives = 44/71 (61%) Frame = -1 Query: 234 LPEDIVFQILVCLPVMSLFRFKSVCKSWRILIESSNFIDQQLNHHSHQYSNYNFVTLSPL 55 +PEDIV +IL+ LPV S+ RF+SVCKSWR ++ F+ QL HHS + + ++ L Sbjct: 40 IPEDIVEEILLRLPVKSILRFRSVCKSWRAMVADPRFVRLQL-HHSTTAARHYPPSMLIL 98 Query: 54 RHYGPPPNRRG 22 + P RRG Sbjct: 99 ADWCLPEQRRG 109 >dbj|BAD72177.1| hypothetical protein [Oryza sativa Japonica Group] Length = 511 Score = 57.8 bits (138), Expect = 9e-07 Identities = 29/71 (40%), Positives = 45/71 (63%) Frame = -1 Query: 234 LPEDIVFQILVCLPVMSLFRFKSVCKSWRILIESSNFIDQQLNHHSHQYSNYNFVTLSPL 55 +PED++ QIL+ LPV S+ RF+SVCKSWR ++ +F+ QL HHS + ++ ++ L Sbjct: 40 IPEDVIEQILLRLPVKSILRFRSVCKSWRSMVAEPHFVRLQL-HHSTTAARHHPPSMLVL 98 Query: 54 RHYGPPPNRRG 22 + P RG Sbjct: 99 ADWCVPEQWRG 109 >dbj|BAD72178.1| hypothetical protein [Oryza sativa Japonica Group] Length = 346 Score = 56.6 bits (135), Expect = 2e-06 Identities = 30/71 (42%), Positives = 44/71 (61%) Frame = -1 Query: 234 LPEDIVFQILVCLPVMSLFRFKSVCKSWRILIESSNFIDQQLNHHSHQYSNYNFVTLSPL 55 +PEDIV +IL+ LPV S+ RF+SVCKSWR ++ F+ QL+ HS + + ++ L Sbjct: 40 IPEDIVEEILLRLPVKSILRFRSVCKSWRAVVADPRFVRLQLD-HSTTAARHRPPSMLIL 98 Query: 54 RHYGPPPNRRG 22 + P RRG Sbjct: 99 ADWCVPEQRRG 109