BLASTX nr result

ID: Coptis24_contig00007132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00007132
         (1243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN94269.1| R2R3 Myb4b C2 repressor motif protein [Vitis vini...   367   3e-99
gb|AAK19619.1|AF336286_1 GHMYB9 [Gossypium hirsutum] gi|20729882...   366   8e-99
ref|XP_002263863.1| PREDICTED: myb-related protein 308 [Vitis vi...   364   2e-98
ref|XP_002278222.1| PREDICTED: myb-related protein 308 [Vitis vi...   364   2e-98
ref|XP_002306180.1| predicted protein [Populus trichocarpa] gi|2...   350   3e-94

>gb|ACN94269.1| R2R3 Myb4b C2 repressor motif protein [Vitis vinifera]
          Length = 242

 Score =  367 bits (943), Expect = 3e-99
 Identities = 178/254 (70%), Positives = 197/254 (77%)
 Frame = -1

Query: 967 MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 788
           MGRSPCCEKAHTNKGAWTKEEDDRLIAHI+AHGEGCWRSLPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDDRLIAHIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 787 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 608
           LRPDLKRGNFT+EEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG
Sbjct: 61  LRPDLKRGNFTDEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 120

Query: 607 VDPATHRAMNEPVSDVKTISFASVTKEEEKIVVGYECKEEKTSIIQREERCPDLNLELQI 428
           +DP THR +NEP  DV T+SF  V K+EE +  G+ CK         EE CPDLNLEL+I
Sbjct: 121 IDPLTHRPINEPAVDVATVSFGGVLKKEEVMSSGFGCKSRNPD----EENCPDLNLELRI 176

Query: 427 SPPYYQPPQESMKSSERRSLCFSCSLGLLNSKDXXXXXXXXXXXXXXXXXXXXXGNDFLG 248
           SPP++ P    + S ERR LCF CSLGL  SK+                      +DFLG
Sbjct: 177 SPPHHHPSPPVLDSRERRMLCFYCSLGLEKSKE----------CSCSSGSGNGSSDDFLG 226

Query: 247 LRSGILDFRNWDMK 206
           + +G+LD+RN +MK
Sbjct: 227 MNNGVLDYRNLEMK 240


>gb|AAK19619.1|AF336286_1 GHMYB9 [Gossypium hirsutum] gi|207298825|gb|ACI23564.1| MYB-like
           protein 3 [Gossypium barbadense]
          Length = 264

 Score =  366 bits (939), Expect = 8e-99
 Identities = 184/266 (69%), Positives = 204/266 (76%), Gaps = 12/266 (4%)
 Frame = -1

Query: 967 MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 788
           MGRSPCCEKAHTNKGAWTKEEDDRLIA+IRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 787 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 608
           LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 120

Query: 607 VDPATHRAMNEPVSDVKTISFASVTKEEEKI-------VVGYECKEEKTSIIQREERCPD 449
           +DPATHR +NE   DV TISF+   +E+EKI        +G+  K+EK   +Q  ERCPD
Sbjct: 121 IDPATHRPLNEASQDVTTISFSGAKEEKEKINTNSNNNPIGFITKDEKKIPVQ--ERCPD 178

Query: 448 LNLELQISPPYYQPPQESMKSSERRSLCFSCSLGLLNSKDXXXXXXXXXXXXXXXXXXXX 269
           LNL+L+ISPPYYQ  Q     +  R+LCF CSLG+ NSKD                    
Sbjct: 179 LNLDLRISPPYYQQTQPESFKTGGRTLCFICSLGVKNSKDCTCSTITTAAGSSSSSSSHS 238

Query: 268 XGN-----DFLGLRSGILDFRNWDMK 206
             N     DFLGL+SGIL++R+ +MK
Sbjct: 239 NSNNSSGYDFLGLKSGILEYRSLEMK 264


>ref|XP_002263863.1| PREDICTED: myb-related protein 308 [Vitis vinifera]
           gi|297734985|emb|CBI17347.3| unnamed protein product
           [Vitis vinifera]
          Length = 242

 Score =  364 bits (935), Expect = 2e-98
 Identities = 177/254 (69%), Positives = 196/254 (77%)
 Frame = -1

Query: 967 MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 788
           MGRSPCCEKAHTNKGAWTKEEDDRLIAHI+AHGEGCWRSLPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDDRLIAHIQAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 787 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 608
           LRPDLKRGNFT+EEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG
Sbjct: 61  LRPDLKRGNFTDEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 120

Query: 607 VDPATHRAMNEPVSDVKTISFASVTKEEEKIVVGYECKEEKTSIIQREERCPDLNLELQI 428
           +DP THR +NE   DV T+SF  V K+EE +  G+ CK         EE CPDLNLEL+I
Sbjct: 121 IDPLTHRPINEAAVDVATVSFGGVLKKEEVMSSGFGCKSRNPD----EENCPDLNLELRI 176

Query: 427 SPPYYQPPQESMKSSERRSLCFSCSLGLLNSKDXXXXXXXXXXXXXXXXXXXXXGNDFLG 248
           SPP++ P    + S ERR LCF CSLGL  SK+                      +DFLG
Sbjct: 177 SPPHHHPSPPVLDSRERRMLCFYCSLGLEKSKE----------CSCSSGSGNGSSDDFLG 226

Query: 247 LRSGILDFRNWDMK 206
           + +G+LD+RN +MK
Sbjct: 227 MNNGVLDYRNLEMK 240


>ref|XP_002278222.1| PREDICTED: myb-related protein 308 [Vitis vinifera]
           gi|119220854|gb|ABL61515.1| R2R3 Myb4a C2 repressor
           motif protein [Vitis vinifera]
          Length = 251

 Score =  364 bits (935), Expect = 2e-98
 Identities = 182/261 (69%), Positives = 203/261 (77%), Gaps = 7/261 (2%)
 Frame = -1

Query: 967 MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 788
           MGRSPCCEKAHTNKGAWTKEEDDRLIA+IRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 787 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 608
           LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLL+RG
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRG 120

Query: 607 VDPATHRAMNEPVSDVKTISFASVTKEEEKIVV----GYECKEEKTSIIQREERCPDLNL 440
           +DP+THR +NEP  DV TISFA+  KEEEKI +    G+ CK EK  +    E+CPDLNL
Sbjct: 121 IDPSTHRPINEPSPDVTTISFAAAVKEEEKINISSTGGFGCKTEKNPV---TEKCPDLNL 177

Query: 439 ELQISPPYYQPPQESMKSSERRS---LCFSCSLGLLNSKDXXXXXXXXXXXXXXXXXXXX 269
           EL+ISPPY    +  +K+  R S   LCF+CSLG+ NS++                    
Sbjct: 178 ELRISPPYQPQAETPLKTGGRSSSTTLCFACSLGIPNSEECSCSIGTSSGSSSSGY---- 233

Query: 268 XGNDFLGLRSGILDFRNWDMK 206
              DFLGL SG+LD+R  +MK
Sbjct: 234 ---DFLGLTSGVLDYRGLEMK 251


>ref|XP_002306180.1| predicted protein [Populus trichocarpa] gi|222849144|gb|EEE86691.1|
           predicted protein [Populus trichocarpa]
           gi|225626253|gb|ACN97176.1| MYB transcription factor
           [Populus trichocarpa]
          Length = 268

 Score =  350 bits (899), Expect = 3e-94
 Identities = 182/272 (66%), Positives = 203/272 (74%), Gaps = 18/272 (6%)
 Frame = -1

Query: 967 MGRSPCCEKAHTNKGAWTKEEDDRLIAHIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINY 788
           MGRSPCCEKAHTNKGAWTKEEDDRLIA+IR HGEGCWRSLPKAAGLLRCGKSCRLRWINY
Sbjct: 1   MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRTHGEGCWRSLPKAAGLLRCGKSCRLRWINY 60

Query: 787 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG 608
           LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLL+RG
Sbjct: 61  LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRG 120

Query: 607 VDPATHRAMNEPVSDVK-TISFASVT--KEE-----------EKIV--VGYECKEEKTSI 476
           +DPATHR +NEP  +   TISF++ T  KEE           EKI+    + CKEEKT +
Sbjct: 121 IDPATHRPLNEPAQEASTTISFSTTTSVKEESLSSVKEESNKEKIISAAAFICKEEKTPV 180

Query: 475 IQREERCPDLNLELQISPPYYQPP--QESMKSSERRSLCFSCSLGLLNSKDXXXXXXXXX 302
              +ERCPDLNLEL+IS P    P   ++ K+    SLCF+CSLGL NSKD         
Sbjct: 181 ---QERCPDLNLELRISLPCQNQPDRHQAFKTGGSTSLCFACSLGLQNSKDCSCSVIVGT 237

Query: 301 XXXXXXXXXXXXGNDFLGLRSGILDFRNWDMK 206
                         DFLG++SG+LD+R  +MK
Sbjct: 238 IGSSSSAGSKTGY-DFLGMKSGVLDYRGLEMK 268


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